RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 FOXN1O15353 648 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 LPXNO60711 386 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 ACTN1P12814 892 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 FKBP1CQ5VVH2 108 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 SOCS4Q8WXH5 440 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 CDCA5Q96FF9 252 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 KCPQ6ZWJ8 1503 aa3.47□□□□□ -1.85
CLOCK-209ENST00000511124 RIC1Q4ADV7 1423 aa3.46□□□□□ -1.85
CLOCK-209ENST00000511124 ZNF804BA4D1E1 1349 aa3.46□□□□□ -1.85
CLOCK-209ENST00000511124 KIF16BQ96L93 1317 aa3.46□□□□□ -1.85
CLOCK-209ENST00000511124 CCL15-CCL14A0A0B4J2E2 113 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 FARP2O94887 1054 aaPredicted RBP3.46□□□□□ -1.86
CLOCK-209ENST00000511124 POTEIP0CG38 1075 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 MFAP1P55081 439 aaKnown RBP3.46□□□□□ -1.86
CLOCK-209ENST00000511124 SCARF1Q14162 830 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 TTF1Q15361 905 aaPredicted RBP3.46□□□□□ -1.86
CLOCK-209ENST00000511124 CCL15Q16663 113 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 CCDC178Q5BJE1 867 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 WDR63Q8IWG1 891 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 CHMP4CQ96CF2 233 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 GAS2L1Q99501 681 aaPredicted RBP3.46□□□□□ -1.86
CLOCK-209ENST00000511124 METTL22Q9BUU2 404 aaPredicted RBP3.46□□□□□ -1.86
CLOCK-209ENST00000511124 NACAP1Q9BZK3 213 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 MYOZ2Q9NPC6 264 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 GPHNQ9NQX3 736 aaPredicted RBP3.46□□□□□ -1.86
CLOCK-209ENST00000511124 COL1A1P02452 1464 aaPredicted RBP3.46□□□□□ -1.86
CLOCK-209ENST00000511124 THSD7BQ9C0I4 1608 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 KDRP35968 1356 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 NFAT5O94916 1531 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 APBB1O00213 710 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 RFX1P22670 979 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 TMPOP42166 694 aaKnown RBP3.46□□□□□ -1.86
CLOCK-209ENST00000511124 TWISTNBQ3B726 338 aaPredicted RBP3.46□□□□□ -1.86
CLOCK-209ENST00000511124 MCM10Q7L590 875 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 ANKLE1Q8NAG6 615 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 DHX36Q9H2U1 1008 aaKnown RBP3.46□□□□□ -1.86
CLOCK-209ENST00000511124 LGR6Q9HBX8 967 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 LRP2BPQ9P2M1 347 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 POTEFA5A3E0 1075 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 SLC10A3P09131 477 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 FDX1P10109 184 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 EIF4A1P60842 406 aaKnown RBP3.46□□□□□ -1.86
CLOCK-209ENST00000511124 GTF2IP78347 998 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 MAP3K12Q12852 859 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 FAM161AQ3B820 660 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 ANGEL2Q5VTE6 544 aaKnown RBP3.46□□□□□ -1.86
CLOCK-209ENST00000511124 NLRP10Q86W26 655 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 AEBP1Q8IUX7 1158 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 SLC17A8Q8NDX2 589 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 GLIS2Q9BZE0 524 aaPredicted RBP3.46□□□□□ -1.86
CLOCK-209ENST00000511124 ARHGEF10LQ9HCE6 1279 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 RAI14Q9P0K7 980 aa3.46□□□□□ -1.86
CLOCK-209ENST00000511124 TTF2Q9UNY4 1162 aaKnown RBP3.46□□□□□ -1.86
CLOCK-209ENST00000511124 BRWD3Q6RI45 1802 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 CICQ96RK0 1608 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-209ENST00000511124 CARNS1A5YM72 827 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 C19orf81C9J6K1 198 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 HCLS1P14317 486 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-209ENST00000511124 CTSWP56202 376 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 CSPP1Q1MSJ5 1256 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 GADL1Q6ZQY3 521 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 NUTM1Q86Y26 1132 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 ZNF34Q8IZ26 560 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 MTMR14Q8NCE2 650 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 TDRD7Q8NHU6 1098 aaKnown RBP3.45□□□□□ -1.86
CLOCK-209ENST00000511124 DBNDD1Q9H9R9 158 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 HMX1Q9NP08 348 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-209ENST00000511124 ADCY9O60503 1353 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 E9PSI1 815 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 NFKBIEO00221 500 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 MPHOSPH10O00566 681 aaKnown RBP3.45□□□□□ -1.86
CLOCK-209ENST00000511124 ZKSCAN1P17029 563 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-209ENST00000511124 MAPK4P31152 587 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 EPS15P42566 896 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 USP5P45974 858 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 NT5C2P49902 561 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 ATP2B2Q01814 1243 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 IKQ13123 557 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-209ENST00000511124 DOK7Q18PE1 504 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 TTC39AQ5SRH9 613 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 ODR4Q5SWX8 454 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 FAM43BQ6ZT52 329 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-209ENST00000511124 RASEFQ8IZ41 740 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 NUDT12Q9BQG2 462 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 RTFDC1Q9BY42 306 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-209ENST00000511124 MSRAQ9UJ68 235 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 CNPY2Q9Y2B0 182 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 LMO7Q8WWI1 1683 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 PSMD14O00487 310 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 POLR3DP05423 398 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-209ENST00000511124 VIL1P09327 827 aaKnown RBP3.45□□□□□ -1.86
CLOCK-209ENST00000511124 SRGAP2BP0DMP2 458 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 IL15P40933 162 aaPredicted RBP3.45□□□□□ -1.86
CLOCK-209ENST00000511124 RGS2P41220 211 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 MFSD14BQ5SR56 506 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 EHMT1Q9H9B1 1298 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 TSHZ2Q9NRE2 1034 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 SERPINA10Q9UK55 444 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 NOD1Q9Y239 953 aa3.45□□□□□ -1.86
CLOCK-209ENST00000511124 USP16Q9Y5T5 823 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms