RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 CALM2P0DP24 149 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 CALM3P0DP25 149 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 IL27Q8NEV9 243 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 ZNF853P0CG23 659 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 STK38Q15208 465 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 ILDR1Q86SU0 546 aaPredicted RBP5.99□□□□□ -1.45
PHF3-210ENST00000509876 MYO3BQ8WXR4 1341 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 PPP1R12BO60237 982 aaPredicted RBP5.99□□□□□ -1.45
PHF3-210ENST00000509876 HAND2P61296 217 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 PABPC4Q13310 644 aaKnown RBP eCLIP5.99□□□□□ -1.45
PHF3-210ENST00000509876 BMP2KLQ5H9B9 411 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 ARMC9Q7Z3E5 817 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 GOPCQ9HD26 462 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 RBM19Q9Y4C8 960 aaKnown RBP5.99□□□□□ -1.45
PHF3-210ENST00000509876 ABCC4O15439 1325 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 AOX1Q06278 1338 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 BAG4O95429 457 aaKnown RBP5.99□□□□□ -1.45
PHF3-210ENST00000509876 TIMM10P62072 90 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 SKOR2Q2VWA4 1001 aaPredicted RBP5.99□□□□□ -1.45
PHF3-210ENST00000509876 DEFB132Q7Z7B7 95 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 BSDC1Q9NW68 430 aaPredicted RBP5.99□□□□□ -1.45
PHF3-210ENST00000509876 IFT172Q9UG01 1749 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 KDM2BQ8NHM5 1336 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 PRKG1Q13976 671 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 RAB3GAP1Q15042 981 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 TSR1Q2NL82 804 aaKnown RBP5.99□□□□□ -1.45
PHF3-210ENST00000509876 SUPT20HL1Q3ZLR7 823 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 TSHZ3Q63HK5 1081 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 KLHDC4Q8TBB5 520 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 SCLT1Q96NL6 688 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.99□□□□□ -1.45
PHF3-210ENST00000509876 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.99□□□□□ -1.45
PHF3-210ENST00000509876 IQCA1LA6NCM1 817 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 TPM1P09493 284 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 NMIQ13287 307 aaPredicted RBP5.99□□□□□ -1.45
PHF3-210ENST00000509876 NEK1Q96PY6 1258 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 COA1Q9GZY4 146 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 SH2B1Q9NRF2 756 aaPredicted RBP5.99□□□□□ -1.45
PHF3-210ENST00000509876 FMN2Q9NZ56 1722 aa5.99□□□□□ -1.45
PHF3-210ENST00000509876 USP17L3A6NCW0 530 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 USP17L4A6NCW7 530 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 NLRP5P59047 1200 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 USP17L1Q7RTZ2 530 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 BMP2KQ9NSY1 1161 aaPredicted RBP5.98□□□□□ -1.45
PHF3-210ENST00000509876 AATFQ9NY61 560 aaKnown RBP eCLIP5.98□□□□□ -1.45
PHF3-210ENST00000509876 NFIXQ14938 502 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 SYNE4Q8N205 404 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 DBNDD2Q9BQY9 259 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 CHMP5Q9NZZ3 219 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 CCDC171Q6TFL3 1326 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 CDHR2Q9BYE9 1310 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 CHMP4BP1P59074 171 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 TMEM266Q2M3C6 531 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 RAB34Q9BZG1 259 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 VAT1LQ9HCJ6 419 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 FAM13BQ9NYF5 915 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 CCDC194A0A1B0GVG4 234 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 GYG1P46976 350 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 METAP2P50579 478 aaKnown RBP eCLIP5.98□□□□□ -1.45
PHF3-210ENST00000509876 HLFQ16534 295 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 KIAA0825Q8IV33 1275 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 CEP89Q96ST8 783 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 DBNDD1Q9H9R9 158 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 CCDC148Q8NFR7 591 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 GOLGA6L19H0YKK7 550 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 SDSP20132 328 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 EPS15P42566 896 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 PCMTD1Q96MG8 357 aaPredicted RBP5.98□□□□□ -1.45
PHF3-210ENST00000509876 TANGO6Q9C0B7 1094 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 ABT1Q9ULW3 272 aaKnown RBP5.98□□□□□ -1.45
PHF3-210ENST00000509876 IVNS1ABPQ9Y6Y0 642 aa5.98□□□□□ -1.45
PHF3-210ENST00000509876 BECN2A8MW95 431 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 TCP10L2B9ZVM9 353 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 TPM3P06753 285 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 LARP1BQ659C4 914 aaKnown RBP5.97□□□□□ -1.45
PHF3-210ENST00000509876 STYK1Q6J9G0 422 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 OLFM4Q6UX06 510 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 NOC3LQ8WTT2 800 aaKnown RBP5.97□□□□□ -1.45
PHF3-210ENST00000509876 ARMT1Q9H993 441 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 RBM27Q9P2N5 1060 aaKnown RBP5.97□□□□□ -1.45
PHF3-210ENST00000509876 ROBO1Q9Y6N7 1651 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 PDE8BO95263 885 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 HMGN5P82970 282 aaKnown RBP5.97□□□□□ -1.45
PHF3-210ENST00000509876 TCP10Q12799 353 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 VTI1AQ96AJ9 217 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 RRP36Q96EU6 259 aaKnown RBP5.97□□□□□ -1.45
PHF3-210ENST00000509876 GPR108Q9NPR9 543 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 ARPP21Q9UBL0 812 aaPredicted RBP5.97□□□□□ -1.45
PHF3-210ENST00000509876 IRX3P78415 501 aaPredicted RBP5.97□□□□□ -1.45
PHF3-210ENST00000509876 SP8Q8IXZ3 490 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 APPBP2Q92624 585 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 SEC31BQ9NQW1 1179 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 SLC5A4Q9NY91 659 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 MED1Q15648 1581 aaPredicted RBP5.97□□□□□ -1.45
PHF3-210ENST00000509876 RLBP1P12271 317 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 K7ELQ4 463 aaPredicted RBP5.97□□□□□ -1.45
PHF3-210ENST00000509876 ZBED4O75132 1171 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 BCAMP50895 628 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 SCNN1DP51172 638 aa5.97□□□□□ -1.45
PHF3-210ENST00000509876 SMARCC2Q8TAQ2 1214 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms