RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 EXOSC10Q01780 885 aaKnown RBP9.31□□□□□ -0.92
SSBP2-213ENST00000509743 NFIXQ14938 502 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 ALX1Q15699 326 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 KLHL40Q2TBA0 621 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 SLFNL1Q499Z3 407 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 MCTP1Q6DN14 999 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 Q6ZUG5 572 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 STOX1Q6ZVD7 989 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 FBXL16Q8N461 479 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 CNBD1Q8NA66 436 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 AIDAQ96BJ3 306 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 AGXT2Q9BYV1 514 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 LRRC4BQ9NT99 713 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 DENND2AQ9ULE3 1009 aa9.31□□□□□ -0.92
SSBP2-213ENST00000509743 ZNF213O14771 459 aa9.3□□□□□ -0.92
SSBP2-213ENST00000509743 FOXP2O15409 715 aa9.3□□□□□ -0.92
SSBP2-213ENST00000509743 FGAP02671 866 aa9.3□□□□□ -0.92
SSBP2-213ENST00000509743 SYT1P21579 422 aa9.3□□□□□ -0.92
SSBP2-213ENST00000509743 BCAMP50895 628 aa9.3□□□□□ -0.92
SSBP2-213ENST00000509743 L1TD1Q5T7N2 865 aaKnown RBP9.3□□□□□ -0.92
SSBP2-213ENST00000509743 RALYLQ86SE5 291 aaKnown RBP9.3□□□□□ -0.92
SSBP2-213ENST00000509743 AMIGO3Q86WK7 504 aa9.3□□□□□ -0.92
SSBP2-213ENST00000509743 VPS37DQ86XT2 251 aa9.3□□□□□ -0.92
SSBP2-213ENST00000509743 CELF1Q92879 486 aaKnown RBP9.3□□□□□ -0.92
SSBP2-213ENST00000509743 GTF3C6Q969F1 213 aa9.3□□□□□ -0.92
SSBP2-213ENST00000509743 LARP6Q9BRS8 491 aaKnown RBP9.3□□□□□ -0.92
SSBP2-213ENST00000509743 LLPHQ9BRT6 129 aaKnown RBP9.3□□□□□ -0.92
SSBP2-213ENST00000509743 WWC3Q9ULE0 1092 aa9.3□□□□□ -0.92
SSBP2-213ENST00000509743 KIF3AQ9Y496 699 aa9.3□□□□□ -0.92
SSBP2-213ENST00000509743 PNPLA7Q6ZV29 1317 aa9.3□□□□□ -0.92
SSBP2-213ENST00000509743 SNAP23O00161 211 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 PFKFB2O60825 505 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 TRIM37O94972 964 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 MBD3O95983 291 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 MCM5P33992 734 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 ST5P78524 1137 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 ST3GAL1Q11201 340 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 TRDNQ13061 729 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 GRAPQ13588 217 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 CSPP1Q1MSJ5 1256 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 TTLL5Q6EMB2 1281 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 SMIM5Q71RC9 77 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 FBXO33Q7Z6M2 555 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 MAGEB6Q8N7X4 407 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 NECAB1Q8N987 351 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 NCOA7Q8NI08 942 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 GRAPLQ8TC17 118 aaPredicted RBP9.29□□□□□ -0.92
SSBP2-213ENST00000509743 BRF1Q92994 677 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 STRBPQ96SI9 672 aaKnown RBP9.29□□□□□ -0.92
SSBP2-213ENST00000509743 LMBRD1Q9NUN5 540 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 LRP2BPQ9P2M1 347 aa9.29□□□□□ -0.92
SSBP2-213ENST00000509743 DDX49Q9Y6V7 483 aaKnown RBP9.29□□□□□ -0.92
SSBP2-213ENST00000509743 MYH14Q7Z406 1995 aaKnown RBP9.29□□□□□ -0.92
SSBP2-213ENST00000509743 MBD4O95243 580 aa9.28□□□□□ -0.92
SSBP2-213ENST00000509743 F13A1P00488 732 aa9.28□□□□□ -0.92
SSBP2-213ENST00000509743 APPP05067 770 aa9.28□□□□□ -0.92
SSBP2-213ENST00000509743 GYS1P13807 737 aa9.28□□□□□ -0.92
SSBP2-213ENST00000509743 TM4SF1P30408 202 aa9.28□□□□□ -0.92
SSBP2-213ENST00000509743 EVCP57679 992 aa9.28□□□□□ -0.92
SSBP2-213ENST00000509743 HMGN5P82970 282 aaKnown RBP9.28□□□□□ -0.92
SSBP2-213ENST00000509743 TXNRD1Q16881 649 aa9.28□□□□□ -0.92
SSBP2-213ENST00000509743 LARP1BQ659C4 914 aaKnown RBP9.28□□□□□ -0.92
SSBP2-213ENST00000509743 PRR5LQ6MZQ0 368 aa9.28□□□□□ -0.92
SSBP2-213ENST00000509743 MB21D2Q8IYB1 491 aaPredicted RBP9.28□□□□□ -0.92
SSBP2-213ENST00000509743 TMEM87AQ8NBN3 555 aa9.28□□□□□ -0.92
SSBP2-213ENST00000509743 RPGRQ92834 1020 aaKnown RBP9.28□□□□□ -0.92
SSBP2-213ENST00000509743 ZNF274Q96GC6 653 aaPredicted RBP9.28□□□□□ -0.92
SSBP2-213ENST00000509743 TCEANC2Q96MN5 208 aa9.28□□□□□ -0.92
SSBP2-213ENST00000509743 NACAP1Q9BZK3 213 aa9.28□□□□□ -0.92
SSBP2-213ENST00000509743 MYH3P11055 1940 aa9.27□□□□□ -0.93
SSBP2-213ENST00000509743 GOLGA6L3A6NEY3 463 aa9.27□□□□□ -0.93
SSBP2-213ENST00000509743 PATL2C9JE40 543 aaKnown RBP9.27□□□□□ -0.93
SSBP2-213ENST00000509743 PLSCR1O15162 318 aa9.27□□□□□ -0.93
SSBP2-213ENST00000509743 NCLP19338 710 aaKnown RBP9.27□□□□□ -0.93
SSBP2-213ENST00000509743 HIBADHP31937 336 aaKnown RBP9.27□□□□□ -0.93
SSBP2-213ENST00000509743 GYG1P46976 350 aa9.27□□□□□ -0.93
SSBP2-213ENST00000509743 COL9A3Q14050 684 aaPredicted RBP9.27□□□□□ -0.93
SSBP2-213ENST00000509743 CRY2Q49AN0 593 aa9.27□□□□□ -0.93
SSBP2-213ENST00000509743 FOXD4L5Q5VV16 416 aaPredicted RBP9.27□□□□□ -0.93
SSBP2-213ENST00000509743 TMC4Q7Z404 712 aa9.27□□□□□ -0.93
SSBP2-213ENST00000509743 FLAD1Q8NFF5 587 aa9.27□□□□□ -0.93
SSBP2-213ENST00000509743 FOXD4L4Q8WXT5 416 aaPredicted RBP9.27□□□□□ -0.93
SSBP2-213ENST00000509743 FAM84BQ96KN1 310 aaPredicted RBP9.27□□□□□ -0.93
SSBP2-213ENST00000509743 NAPBQ9H115 298 aa9.27□□□□□ -0.93
SSBP2-213ENST00000509743 GZF1Q9H116 711 aaPredicted RBP9.27□□□□□ -0.93
SSBP2-213ENST00000509743 CNNM2Q9H8M5 875 aa9.27□□□□□ -0.93
SSBP2-213ENST00000509743 MTMR6Q9Y217 621 aa9.27□□□□□ -0.93
SSBP2-213ENST00000509743 LEMD3Q9Y2U8 911 aa9.27□□□□□ -0.93
SSBP2-213ENST00000509743 XDHP47989 1333 aa9.27□□□□□ -0.93
SSBP2-213ENST00000509743 VPS37CA5D8V6 355 aaPredicted RBP9.26□□□□□ -0.93
SSBP2-213ENST00000509743 PRC1O43663 620 aa9.26□□□□□ -0.93
SSBP2-213ENST00000509743 DHX16O60231 1041 aaKnown RBP9.26□□□□□ -0.93
SSBP2-213ENST00000509743 PRPF40AO75400 957 aaKnown RBP9.26□□□□□ -0.93
SSBP2-213ENST00000509743 SERPINB2P05120 415 aa9.26□□□□□ -0.93
SSBP2-213ENST00000509743 CYP7A1P22680 504 aa9.26□□□□□ -0.93
SSBP2-213ENST00000509743 HAND2P61296 217 aa9.26□□□□□ -0.93
SSBP2-213ENST00000509743 STK3Q13188 491 aa9.26□□□□□ -0.93
SSBP2-213ENST00000509743 SPTY2D1Q68D10 685 aaPredicted RBP9.26□□□□□ -0.93
SSBP2-213ENST00000509743 C15orf52Q6ZUT6 534 aaKnown RBP9.26□□□□□ -0.93
SSBP2-213ENST00000509743 SMARCC2Q8TAQ2 1214 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms