RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CYP4F12Q9HCS2 524 aa7.24□□□□□ -1.25
NIPBL-206ENST00000509429 USP20Q9Y2K6 914 aa7.24□□□□□ -1.25
NIPBL-206ENST00000509429 FAM177BA6PVY3 158 aa7.23□□□□□ -1.25
NIPBL-206ENST00000509429 YIPF2Q9BWQ6 316 aa7.23□□□□□ -1.25
NIPBL-206ENST00000509429 TMPRSS13Q9BYE2 586 aa7.23□□□□□ -1.25
NIPBL-206ENST00000509429 NPIPB6E9PJ23 425 aa7.22□□□□□ -1.25
NIPBL-206ENST00000509429 KRTAP10-2P60368 255 aa7.22□□□□□ -1.25
NIPBL-206ENST00000509429 WASHC4Q2M389 1173 aa7.22□□□□□ -1.25
NIPBL-206ENST00000509429 CMTR1Q8N1G2 835 aaKnown RBP7.22□□□□□ -1.25
NIPBL-206ENST00000509429 LIN37Q96GY3 246 aaPredicted RBP7.22□□□□□ -1.25
NIPBL-206ENST00000509429 ZMYND15Q9H091 742 aa7.22□□□□□ -1.25
NIPBL-206ENST00000509429 H3BRJ5 948 aa7.21□□□□□ -1.26
NIPBL-206ENST00000509429 PTPRAP18433 802 aa7.21□□□□□ -1.26
NIPBL-206ENST00000509429 RASA1P20936 1047 aa7.21□□□□□ -1.26
NIPBL-206ENST00000509429 DGKZQ13574 1117 aa7.21□□□□□ -1.26
NIPBL-206ENST00000509429 DEPDC4Q8N2C3 294 aa7.21□□□□□ -1.26
NIPBL-206ENST00000509429 GTF3C3Q9Y5Q9 886 aa7.21□□□□□ -1.26
NIPBL-206ENST00000509429 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.2□□□□□ -1.26
NIPBL-206ENST00000509429 CLDN10P78369 228 aa7.2□□□□□ -1.26
NIPBL-206ENST00000509429 CIAPIN1Q6FI81 312 aa7.2□□□□□ -1.26
NIPBL-206ENST00000509429 RASSF4Q9H2L5 321 aa7.2□□□□□ -1.26
NIPBL-206ENST00000509429 CRIM1Q9NZV1 1036 aa7.2□□□□□ -1.26
NIPBL-206ENST00000509429 CABP4P57796 275 aa7.19□□□□□ -1.26
NIPBL-206ENST00000509429 HYAL2Q12891 473 aa7.19□□□□□ -1.26
NIPBL-206ENST00000509429 COL13A1Q5TAT6 717 aaPredicted RBP7.19□□□□□ -1.26
NIPBL-206ENST00000509429 KCNMB2Q9Y691 235 aa7.19□□□□□ -1.26
NIPBL-206ENST00000509429 USP17L5A8MUK1 530 aa7.18□□□□□ -1.26
NIPBL-206ENST00000509429 IGHA2P01877 340 aa7.18□□□□□ -1.26
NIPBL-206ENST00000509429 DRD2P14416 443 aa7.18□□□□□ -1.26
NIPBL-206ENST00000509429 SYN1P17600 705 aa7.18□□□□□ -1.26
NIPBL-206ENST00000509429 NPM2Q86SE8 214 aaKnown RBP7.18□□□□□ -1.26
NIPBL-206ENST00000509429 RGL4Q8IZJ4 473 aa7.18□□□□□ -1.26
NIPBL-206ENST00000509429 LARGE2Q8N3Y3 721 aa7.18□□□□□ -1.26
NIPBL-206ENST00000509429 OR13H1Q8NG92 308 aa7.18□□□□□ -1.26
NIPBL-206ENST00000509429 BORCS6Q96GS4 357 aa7.18□□□□□ -1.26
NIPBL-206ENST00000509429 VAV3Q9UKW4 847 aa7.18□□□□□ -1.26
NIPBL-206ENST00000509429 PRR23BQ6ZRT6 265 aa7.17□□□□□ -1.26
NIPBL-206ENST00000509429 NLRP13Q86W25 1043 aa7.17□□□□□ -1.26
NIPBL-206ENST00000509429 C2CD4AQ8NCU7 369 aaPredicted RBP7.17□□□□□ -1.26
NIPBL-206ENST00000509429 PBX4Q9BYU1 374 aa7.17□□□□□ -1.26
NIPBL-206ENST00000509429 PARD6AQ9NPB6 346 aa7.17□□□□□ -1.26
NIPBL-206ENST00000509429 PALM3A6NDB9 673 aaPredicted RBP7.16□□□□□ -1.26
NIPBL-206ENST00000509429 KCNA10Q16322 511 aa7.16□□□□□ -1.26
NIPBL-206ENST00000509429 MAP7Q14244 749 aa7.15□□□□□ -1.26
NIPBL-206ENST00000509429 C11orf91Q3C1V1 193 aa7.15□□□□□ -1.26
NIPBL-206ENST00000509429 BCL11AQ9H165 835 aa7.15□□□□□ -1.26
NIPBL-206ENST00000509429 CD320Q9NPF0 282 aa7.15□□□□□ -1.26
NIPBL-206ENST00000509429 ARL4DP49703 201 aa7.14□□□□□ -1.27
NIPBL-206ENST00000509429 PRKCQQ04759 706 aa7.14□□□□□ -1.27
NIPBL-206ENST00000509429 SLC23A3Q6PIS1 610 aa7.14□□□□□ -1.27
NIPBL-206ENST00000509429 SIX5Q8N196 739 aa7.14□□□□□ -1.27
NIPBL-206ENST00000509429 NETO1Q8TDF5 533 aa7.14□□□□□ -1.27
NIPBL-206ENST00000509429 SLC7A3Q8WY07 619 aa7.14□□□□□ -1.27
NIPBL-206ENST00000509429 POP1Q99575 1024 aaKnown RBP7.14□□□□□ -1.27
NIPBL-206ENST00000509429 RBM19Q9Y4C8 960 aaKnown RBP7.14□□□□□ -1.27
NIPBL-206ENST00000509429 SUV39H1O43463 412 aa7.13□□□□□ -1.27
NIPBL-206ENST00000509429 TMEM253P0C7T8 217 aa7.13□□□□□ -1.27
NIPBL-206ENST00000509429 CD96P40200 585 aa7.13□□□□□ -1.27
NIPBL-206ENST00000509429 NFKB2Q00653 900 aa7.13□□□□□ -1.27
NIPBL-206ENST00000509429 OGFOD3Q6PK18 319 aa7.13□□□□□ -1.27
NIPBL-206ENST00000509429 PLD6Q8N2A8 252 aaKnown RBP7.13□□□□□ -1.27
NIPBL-206ENST00000509429 FBXO15Q8NCQ5 510 aaPredicted RBP7.13□□□□□ -1.27
NIPBL-206ENST00000509429 A0A0G2JLL6 359 aaPredicted RBP7.12□□□□□ -1.27
NIPBL-206ENST00000509429 NFICP08651 508 aa7.12□□□□□ -1.27
NIPBL-206ENST00000509429 SOX4Q06945 474 aaPredicted RBP7.12□□□□□ -1.27
NIPBL-206ENST00000509429 C19orf57Q0VDD7 668 aa7.12□□□□□ -1.27
NIPBL-206ENST00000509429 MPZL3Q6UWV2 235 aa7.12□□□□□ -1.27
NIPBL-206ENST00000509429 PRRT2Q7Z6L0 340 aaPredicted RBP7.12□□□□□ -1.27
NIPBL-206ENST00000509429 OGFOD1Q8N543 542 aa7.12□□□□□ -1.27
NIPBL-206ENST00000509429 EXOSC6Q5RKV6 272 aaKnown RBP7.11□□□□□ -1.27
NIPBL-206ENST00000509429 QTRT2Q9H974 415 aaKnown RBP7.11□□□□□ -1.27
NIPBL-206ENST00000509429 DKK1O94907 266 aa7.1□□□□□ -1.27
NIPBL-206ENST00000509429 KIF4AO95239 1232 aa7.1□□□□□ -1.27
NIPBL-206ENST00000509429 SCNN1AP37088 669 aa7.1□□□□□ -1.27
NIPBL-206ENST00000509429 ZCCHC4Q9H5U6 513 aa7.1□□□□□ -1.27
NIPBL-206ENST00000509429 LOC100289279A0A1B0GTE1 492 aa7.09□□□□□ -1.27
NIPBL-206ENST00000509429 GLI1P08151 1106 aa7.09□□□□□ -1.27
NIPBL-206ENST00000509429 ABL2P42684 1182 aa7.09□□□□□ -1.27
NIPBL-206ENST00000509429 NFIXQ14938 502 aa7.09□□□□□ -1.27
NIPBL-206ENST00000509429 ATG14Q6ZNE5 492 aa7.09□□□□□ -1.27
NIPBL-206ENST00000509429 USP26Q9BXU7 913 aa7.09□□□□□ -1.27
NIPBL-206ENST00000509429 SEMA6CQ9H3T2 930 aa7.09□□□□□ -1.27
NIPBL-206ENST00000509429 PITPNM2Q9BZ72 1349 aa7.08□□□□□ -1.28
NIPBL-206ENST00000509429 NUAK1O60285 661 aa7.08□□□□□ -1.28
NIPBL-206ENST00000509429 DLGAP3O95886 979 aa7.08□□□□□ -1.28
NIPBL-206ENST00000509429 CYP27C1Q4G0S4 372 aa7.08□□□□□ -1.28
NIPBL-206ENST00000509429 ANGEL2Q5VTE6 544 aaKnown RBP7.08□□□□□ -1.28
NIPBL-206ENST00000509429 TREML1Q86YW5 311 aa7.08□□□□□ -1.28
NIPBL-206ENST00000509429 PLEKHM2Q8IWE5 1019 aa7.08□□□□□ -1.28
NIPBL-206ENST00000509429 CEP120Q8N960 986 aa7.08□□□□□ -1.28
NIPBL-206ENST00000509429 TCAF2A6NFQ2 919 aa7.07□□□□□ -1.28
NIPBL-206ENST00000509429 IGFBP4P22692 258 aa7.07□□□□□ -1.28
NIPBL-206ENST00000509429 AFMP43652 599 aa7.07□□□□□ -1.28
NIPBL-206ENST00000509429 AOC3Q16853 763 aa7.07□□□□□ -1.28
NIPBL-206ENST00000509429 HGSNATQ68CP4 663 aa7.07□□□□□ -1.28
NIPBL-206ENST00000509429 MYO19Q96H55 970 aa7.07□□□□□ -1.28
NIPBL-206ENST00000509429 GDPD2Q9HCC8 539 aa7.07□□□□□ -1.28
NIPBL-206ENST00000509429 C1GALT1Q9NS00 363 aa7.07□□□□□ -1.28
NIPBL-206ENST00000509429 ADRB1P08588 477 aa7.06□□□□□ -1.28
NIPBL-206ENST00000509429 MED14OSP0DP75 135 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms