RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 NRBP1Q9UHY1 535 aa12.85□□□□□ -0.35
SEC31A-228ENST00000509142 UBR2Q8IWV8 1755 aa12.85□□□□□ -0.35
SEC31A-228ENST00000509142 LAMA4Q16363 1823 aa12.85□□□□□ -0.35
SEC31A-228ENST00000509142 PDIA3P30101 505 aaKnown RBP12.85□□□□□ -0.35
SEC31A-228ENST00000509142 TTF1Q15361 905 aaPredicted RBP12.85□□□□□ -0.35
SEC31A-228ENST00000509142 RBM43Q6ZSC3 357 aaKnown RBP12.85□□□□□ -0.35
SEC31A-228ENST00000509142 SMARCC2Q8TAQ2 1214 aa12.85□□□□□ -0.35
SEC31A-228ENST00000509142 ZNF274Q96GC6 653 aaPredicted RBP12.85□□□□□ -0.35
SEC31A-228ENST00000509142 TAOK2Q9UL54 1235 aa12.85□□□□□ -0.35
SEC31A-228ENST00000509142 PRC1O43663 620 aa12.85□□□□□ -0.35
SEC31A-228ENST00000509142 IL6STP40189 918 aaPredicted RBP12.85□□□□□ -0.35
SEC31A-228ENST00000509142 NCOA7Q8NI08 942 aa12.85□□□□□ -0.35
SEC31A-228ENST00000509142 MPHOSPH8Q99549 860 aa12.85□□□□□ -0.35
SEC31A-228ENST00000509142 CBX8Q9HC52 389 aa12.85□□□□□ -0.35
SEC31A-228ENST00000509142 DHX16O60231 1041 aaKnown RBP12.84□□□□□ -0.35
SEC31A-228ENST00000509142 ADD1P35611 737 aaKnown RBP12.84□□□□□ -0.35
SEC31A-228ENST00000509142 MCAMP43121 646 aa12.84□□□□□ -0.35
SEC31A-228ENST00000509142 ACSBG1Q96GR2 724 aa12.84□□□□□ -0.35
SEC31A-228ENST00000509142 ZNF396Q96N95 335 aaPredicted RBP12.84□□□□□ -0.35
SEC31A-228ENST00000509142 PDE8BO95263 885 aa12.84□□□□□ -0.35
SEC31A-228ENST00000509142 CTDNEP1O95476 244 aa12.84□□□□□ -0.35
SEC31A-228ENST00000509142 ANO6Q4KMQ2 910 aa12.84□□□□□ -0.35
SEC31A-228ENST00000509142 NAA16Q6N069 864 aaPredicted RBP12.84□□□□□ -0.35
SEC31A-228ENST00000509142 FAM200AQ8TCP9 573 aa12.84□□□□□ -0.35
SEC31A-228ENST00000509142 NUP188Q5SRE5 1749 aa12.84□□□□□ -0.35
SEC31A-228ENST00000509142 PTGS1P23219 599 aa12.84□□□□□ -0.35
SEC31A-228ENST00000509142 DNTTIP2Q5QJE6 756 aaKnown RBP12.84□□□□□ -0.35
SEC31A-228ENST00000509142 KLF18A0A0U1RQI7 1052 aa12.83□□□□□ -0.36
SEC31A-228ENST00000509142 ERVV-1B6SEH8 477 aa12.83□□□□□ -0.36
SEC31A-228ENST00000509142 GTF2F1P35269 517 aaKnown RBP eCLIP12.83□□□□□ -0.36
SEC31A-228ENST00000509142 LRMPQ12912 555 aa12.83□□□□□ -0.36
SEC31A-228ENST00000509142 DDB1Q16531 1140 aa12.83□□□□□ -0.36
SEC31A-228ENST00000509142 GLIPR1L2Q4G1C9 344 aa12.83□□□□□ -0.36
SEC31A-228ENST00000509142 RAB11FIP4Q86YS3 637 aa12.83□□□□□ -0.36
SEC31A-228ENST00000509142 GPHNQ9NQX3 736 aaPredicted RBP12.83□□□□□ -0.36
SEC31A-228ENST00000509142 BCL9O00512 1426 aa12.83□□□□□ -0.36
SEC31A-228ENST00000509142 GOLGA8BA8MQT2 603 aa12.83□□□□□ -0.36
SEC31A-228ENST00000509142 ATP6V1AP38606 617 aa12.83□□□□□ -0.36
SEC31A-228ENST00000509142 A0A087WWV3 80 aa12.83□□□□□ -0.36
SEC31A-228ENST00000509142 UQCRFS1P1P0C7P4 283 aa12.83□□□□□ -0.36
SEC31A-228ENST00000509142 CCDC102BQ68D86 513 aa12.82□□□□□ -0.36
SEC31A-228ENST00000509142 CCDC73Q6ZRK6 1079 aa12.82□□□□□ -0.36
SEC31A-228ENST00000509142 KLHL34Q8N239 644 aa12.82□□□□□ -0.36
SEC31A-228ENST00000509142 AGXT2Q9BYV1 514 aa12.82□□□□□ -0.36
SEC31A-228ENST00000509142 TJP1Q07157 1748 aa12.82□□□□□ -0.36
SEC31A-228ENST00000509142 PHKA1P46020 1223 aa12.82□□□□□ -0.36
SEC31A-228ENST00000509142 AIDAQ96BJ3 306 aa12.82□□□□□ -0.36
SEC31A-228ENST00000509142 STRCQ7RTU9 1775 aa12.82□□□□□ -0.36
SEC31A-228ENST00000509142 SLC5A1P13866 664 aa12.82□□□□□ -0.36
SEC31A-228ENST00000509142 ME1P48163 572 aa12.82□□□□□ -0.36
SEC31A-228ENST00000509142 PUM3Q15397 648 aaKnown RBP12.82□□□□□ -0.36
SEC31A-228ENST00000509142 SF3A1Q15459 793 aaKnown RBP12.82□□□□□ -0.36
SEC31A-228ENST00000509142 CLSTN2Q9H4D0 955 aa12.82□□□□□ -0.36
SEC31A-228ENST00000509142 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.81□□□□□ -0.36
SEC31A-228ENST00000509142 ADD2P35612 726 aa12.81□□□□□ -0.36
SEC31A-228ENST00000509142 LPIN2Q92539 896 aa12.81□□□□□ -0.36
SEC31A-228ENST00000509142 C8orf76Q96K31 380 aa12.81□□□□□ -0.36
SEC31A-228ENST00000509142 ABCC12Q96J65 1359 aa12.81□□□□□ -0.36
SEC31A-228ENST00000509142 NUTM2BA6NNL0 878 aaPredicted RBP12.81□□□□□ -0.36
SEC31A-228ENST00000509142 NUTM2EB1AL46 878 aaPredicted RBP12.81□□□□□ -0.36
SEC31A-228ENST00000509142 NUTM2AQ8IVF1 878 aaPredicted RBP12.81□□□□□ -0.36
SEC31A-228ENST00000509142 UTP14AQ9BVJ6 771 aaKnown RBP12.81□□□□□ -0.36
SEC31A-228ENST00000509142 CCDC87Q9NVE4 849 aa12.81□□□□□ -0.36
SEC31A-228ENST00000509142 ORC3Q9UBD5 711 aaPredicted RBP12.81□□□□□ -0.36
SEC31A-228ENST00000509142 DNAJC25Q9H1X3 360 aa12.81□□□□□ -0.36
SEC31A-228ENST00000509142 PIH1D3Q9NQM4 214 aaKnown RBP12.81□□□□□ -0.36
SEC31A-228ENST00000509142 ZNF532Q9HCE3 1301 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 GOLGA6L6A8MZA4 724 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
SEC31A-228ENST00000509142 PLA2G4DQ86XP0 818 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 CCAR1Q8IX12 1150 aaKnown RBP12.8□□□□□ -0.36
SEC31A-228ENST00000509142 DRC7Q8IY82 874 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 PRIMPOLQ96LW4 560 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 CDCA7Q9BWT1 371 aaPredicted RBP12.8□□□□□ -0.36
SEC31A-228ENST00000509142 GOLPH3LQ9H4A5 285 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 PAPPAQ13219 1627 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 CCDC144BQ3MJ40 725 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 CCDC144CPQ8IYA2 1237 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 UBN2Q6ZU65 1347 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 MROH5Q6ZUA9 1318 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 KINO60870 393 aaKnown RBP12.8□□□□□ -0.36
SEC31A-228ENST00000509142 IGHMBP2P38935 993 aaKnown RBP12.8□□□□□ -0.36
SEC31A-228ENST00000509142 MAP3K12Q12852 859 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 SUSD4Q5VX71 490 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 OTUD7BQ6GQQ9 843 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 NFXL1Q6ZNB6 911 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 CCDC186Q7Z3E2 898 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 ZNF34Q8IZ26 560 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 USP28Q96RU2 1077 aa12.8□□□□□ -0.36
SEC31A-228ENST00000509142 UBE3CQ15386 1083 aa12.79□□□□□ -0.36
SEC31A-228ENST00000509142 CPLX2Q6PUV4 134 aaKnown RBP12.79□□□□□ -0.36
SEC31A-228ENST00000509142 NIP7Q9Y221 180 aaKnown RBP eCLIP12.79□□□□□ -0.36
SEC31A-228ENST00000509142 RIC1Q4ADV7 1423 aa12.79□□□□□ -0.36
SEC31A-228ENST00000509142 MYH15Q9Y2K3 1946 aa12.79□□□□□ -0.36
SEC31A-228ENST00000509142 CARMIL3Q8ND23 1372 aa12.79□□□□□ -0.36
SEC31A-228ENST00000509142 TOGARAM1Q9Y4F4 1720 aa12.79□□□□□ -0.36
SEC31A-228ENST00000509142 PDE6AP16499 860 aa12.79□□□□□ -0.36
SEC31A-228ENST00000509142 CRKLP46109 303 aaKnown RBP12.79□□□□□ -0.36
SEC31A-228ENST00000509142 MB21D2Q8IYB1 491 aaPredicted RBP12.79□□□□□ -0.36
SEC31A-228ENST00000509142 TOMM22Q9NS69 142 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms