RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 FLIIQ13045 1269 aa12.75□□□□□ -0.37
SH3D21-206ENST00000508854 IFIT5Q13325 482 aaKnown RBP12.75□□□□□ -0.37
SH3D21-206ENST00000508854 FKBP5Q13451 457 aaPredicted RBP12.75□□□□□ -0.37
SH3D21-206ENST00000508854 TSR2Q969E8 191 aaKnown RBP12.75□□□□□ -0.37
SH3D21-206ENST00000508854 CACNA1FO60840 1977 aa12.74□□□□□ -0.37
SH3D21-206ENST00000508854 IL1R1P14778 569 aa12.74□□□□□ -0.37
SH3D21-206ENST00000508854 IREB2P48200 963 aaKnown RBP12.74□□□□□ -0.37
SH3D21-206ENST00000508854 G2E3Q7L622 706 aa12.74□□□□□ -0.37
SH3D21-206ENST00000508854 IFNL1Q8IU54 200 aa12.74□□□□□ -0.37
SH3D21-206ENST00000508854 WWC1Q8IX03 1113 aa12.74□□□□□ -0.37
SH3D21-206ENST00000508854 ERO1AQ96HE7 468 aa12.74□□□□□ -0.37
SH3D21-206ENST00000508854 ZNF646O15015 1829 aaPredicted RBP12.74□□□□□ -0.37
SH3D21-206ENST00000508854 KLRK1P26718 216 aa12.73□□□□□ -0.37
SH3D21-206ENST00000508854 CASP7P55210 303 aa12.73□□□□□ -0.37
SH3D21-206ENST00000508854 TNFAIP1Q13829 316 aa12.73□□□□□ -0.37
SH3D21-206ENST00000508854 ARHGEF6Q15052 776 aa12.73□□□□□ -0.37
SH3D21-206ENST00000508854 WNK4Q96J92 1243 aa12.73□□□□□ -0.37
SH3D21-206ENST00000508854 TRIM17Q9Y577 477 aa12.73□□□□□ -0.37
SH3D21-206ENST00000508854 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
SH3D21-206ENST00000508854 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
SH3D21-206ENST00000508854 CCDC57Q2TAC2 916 aa12.72□□□□□ -0.37
SH3D21-206ENST00000508854 CFAP100Q494V2 611 aa12.72□□□□□ -0.37
SH3D21-206ENST00000508854 TAF7LQ5H9L4 462 aa12.72□□□□□ -0.37
SH3D21-206ENST00000508854 ANKRD13AQ8IZ07 590 aa12.72□□□□□ -0.37
SH3D21-206ENST00000508854 CHMP3Q9Y3E7 222 aa12.72□□□□□ -0.37
SH3D21-206ENST00000508854 TAF5LO75529 589 aa12.71□□□□□ -0.37
SH3D21-206ENST00000508854 RBM5P52756 815 aaKnown RBP eCLIP12.71□□□□□ -0.37
SH3D21-206ENST00000508854 CERS5Q8N5B7 392 aa12.71□□□□□ -0.37
SH3D21-206ENST00000508854 VEZTQ9HBM0 779 aa12.71□□□□□ -0.37
SH3D21-206ENST00000508854 ECM29Q5VYK3 1845 aa12.71□□□□□ -0.38
SH3D21-206ENST00000508854 F8W031 263 aaPredicted RBP12.7□□□□□ -0.38
SH3D21-206ENST00000508854 WDHD1O75717 1129 aaPredicted RBP12.7□□□□□ -0.38
SH3D21-206ENST00000508854 LDHAL6AQ6ZMR3 332 aa12.7□□□□□ -0.38
SH3D21-206ENST00000508854 OTOP1Q7RTM1 612 aa12.7□□□□□ -0.38
SH3D21-206ENST00000508854 WDR63Q8IWG1 891 aa12.7□□□□□ -0.38
SH3D21-206ENST00000508854 HELBQ8NG08 1087 aaPredicted RBP12.7□□□□□ -0.38
SH3D21-206ENST00000508854 PRMT6Q96LA8 375 aaPredicted RBP12.7□□□□□ -0.38
SH3D21-206ENST00000508854 R3HDMLQ9H3Y0 253 aa12.7□□□□□ -0.38
SH3D21-206ENST00000508854 CNNM1Q9NRU3 951 aa12.7□□□□□ -0.38
SH3D21-206ENST00000508854 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
SH3D21-206ENST00000508854 FAM205AQ6ZU69 1335 aa12.69□□□□□ -0.38
SH3D21-206ENST00000508854 IRS2Q9Y4H2 1338 aa12.69□□□□□ -0.38
SH3D21-206ENST00000508854 CLRN2A0PK11 232 aa12.69□□□□□ -0.38
SH3D21-206ENST00000508854 TESPA1A2RU30 521 aaPredicted RBP12.69□□□□□ -0.38
SH3D21-206ENST00000508854 USP2O75604 605 aaPredicted RBP12.69□□□□□ -0.38
SH3D21-206ENST00000508854 TNNI2P48788 182 aa12.69□□□□□ -0.38
SH3D21-206ENST00000508854 FOXO4P98177 505 aa12.69□□□□□ -0.38
SH3D21-206ENST00000508854 RASA3Q14644 834 aa12.69□□□□□ -0.38
SH3D21-206ENST00000508854 NBPF12Q5TAG4 269 aaPredicted RBP12.69□□□□□ -0.38
SH3D21-206ENST00000508854 CLMNQ96JQ2 1002 aa12.69□□□□□ -0.38
SH3D21-206ENST00000508854 EFCC1Q9HA90 598 aa12.69□□□□□ -0.38
SH3D21-206ENST00000508854 SERPINA10Q9UK55 444 aa12.69□□□□□ -0.38
SH3D21-206ENST00000508854 PTPN22Q9Y2R2 807 aa12.69□□□□□ -0.38
SH3D21-206ENST00000508854 IGF2BP3O00425 579 aaKnown RBP eCLIP12.68□□□□□ -0.38
SH3D21-206ENST00000508854 PLIN1O60240 522 aa12.68□□□□□ -0.38
SH3D21-206ENST00000508854 VAMP4O75379 141 aa12.68□□□□□ -0.38
SH3D21-206ENST00000508854 SP3Q02447 781 aa12.68□□□□□ -0.38
SH3D21-206ENST00000508854 UBE4AQ14139 1066 aa12.68□□□□□ -0.38
SH3D21-206ENST00000508854 BEND3Q5T5X7 828 aa12.68□□□□□ -0.38
SH3D21-206ENST00000508854 LMBR1LQ6UX01 489 aa12.68□□□□□ -0.38
SH3D21-206ENST00000508854 C9orf78Q9NZ63 289 aaPredicted RBP12.68□□□□□ -0.38
SH3D21-206ENST00000508854 FZD1Q9UP38 647 aa12.68□□□□□ -0.38
SH3D21-206ENST00000508854 FANCIQ9NVI1 1328 aa12.67□□□□□ -0.38
SH3D21-206ENST00000508854 LAMB1P07942 1786 aa12.67□□□□□ -0.38
SH3D21-206ENST00000508854 SNAP23O00161 211 aa12.67□□□□□ -0.38
SH3D21-206ENST00000508854 GRM8O00222 908 aa12.67□□□□□ -0.38
SH3D21-206ENST00000508854 HIBADHP31937 336 aaKnown RBP12.67□□□□□ -0.38
SH3D21-206ENST00000508854 CRHR2Q13324 411 aa12.67□□□□□ -0.38
SH3D21-206ENST00000508854 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
SH3D21-206ENST00000508854 MFSD14BQ5SR56 506 aa12.67□□□□□ -0.38
SH3D21-206ENST00000508854 NBPF11Q86T75 865 aa12.67□□□□□ -0.38
SH3D21-206ENST00000508854 TMEM106CQ9BVX2 250 aa12.67□□□□□ -0.38
SH3D21-206ENST00000508854 SSC5DA1L4H1 1573 aa12.66□□□□□ -0.38
SH3D21-206ENST00000508854 GTF2A2P52657 109 aa12.66□□□□□ -0.38
SH3D21-206ENST00000508854 VPS37DQ86XT2 251 aa12.66□□□□□ -0.38
SH3D21-206ENST00000508854 TDRD7Q8NHU6 1098 aaKnown RBP12.66□□□□□ -0.38
SH3D21-206ENST00000508854 CD99L2Q8TCZ2 262 aa12.66□□□□□ -0.38
SH3D21-206ENST00000508854 ARMC5Q96C12 935 aa12.66□□□□□ -0.38
SH3D21-206ENST00000508854 OPTNQ96CV9 577 aa12.66□□□□□ -0.38
SH3D21-206ENST00000508854 HOOK2Q96ED9 719 aa12.66□□□□□ -0.38
SH3D21-206ENST00000508854 ZFYVE28Q9HCC9 887 aa12.66□□□□□ -0.38
SH3D21-206ENST00000508854 ZNF70Q9UC06 446 aaPredicted RBP12.66□□□□□ -0.38
SH3D21-206ENST00000508854 TTF2Q9UNY4 1162 aaKnown RBP12.66□□□□□ -0.38
SH3D21-206ENST00000508854 CSADQ9Y600 493 aa12.66□□□□□ -0.38
SH3D21-206ENST00000508854 ALDH1L1O75891 902 aa12.65□□□□□ -0.38
SH3D21-206ENST00000508854 MAP3K9P80192 1104 aa12.65□□□□□ -0.38
SH3D21-206ENST00000508854 HDLBPQ00341 1268 aaKnown RBP12.65□□□□□ -0.38
SH3D21-206ENST00000508854 DZIP1LQ8IYY4 767 aaKnown RBP12.65□□□□□ -0.38
SH3D21-206ENST00000508854 TBC1D22AQ8WUA7 517 aa12.65□□□□□ -0.38
SH3D21-206ENST00000508854 PCDHAC2Q9Y5I4 1007 aa12.65□□□□□ -0.38
SH3D21-206ENST00000508854 MROH5Q6ZUA9 1318 aa12.64□□□□□ -0.39
SH3D21-206ENST00000508854 F6X3S4 739 aa12.64□□□□□ -0.39
SH3D21-206ENST00000508854 EXOSC9Q06265 439 aaKnown RBP12.64□□□□□ -0.39
SH3D21-206ENST00000508854 CAVIN4Q5BKX8 364 aa12.64□□□□□ -0.39
SH3D21-206ENST00000508854 ZNF594Q96JF6 807 aaPredicted RBP12.64□□□□□ -0.39
SH3D21-206ENST00000508854 PTPN18Q99952 460 aa12.64□□□□□ -0.39
SH3D21-206ENST00000508854 TDRD3Q9H7E2 651 aaKnown RBP12.64□□□□□ -0.39
SH3D21-206ENST00000508854 ELP3Q9H9T3 547 aa12.64□□□□□ -0.39
SH3D21-206ENST00000508854 ZCCHC17Q9NP64 241 aaKnown RBP12.64□□□□□ -0.39
SH3D21-206ENST00000508854 JAG2Q9Y219 1238 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms