RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 IGFBP4P22692 258 aa7.48□□□□□ -1.21
HMGB1P44-201ENST00000508597 HIRAP54198 1017 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P44-201ENST00000508597 GRIN2CQ14957 1233 aa7.48□□□□□ -1.21
HMGB1P44-201ENST00000508597 LRRC69Q6ZNQ3 347 aa7.48□□□□□ -1.21
HMGB1P44-201ENST00000508597 SSH2Q76I76 1423 aa7.48□□□□□ -1.21
HMGB1P44-201ENST00000508597 ALDH16A1Q8IZ83 802 aa7.48□□□□□ -1.21
HMGB1P44-201ENST00000508597 STAG2Q8N3U4 1231 aa7.48□□□□□ -1.21
HMGB1P44-201ENST00000508597 KCTD17Q8N5Z5 321 aa7.48□□□□□ -1.21
HMGB1P44-201ENST00000508597 WHAMMQ8TF30 809 aa7.48□□□□□ -1.21
HMGB1P44-201ENST00000508597 HSH2DQ96JZ2 352 aa7.48□□□□□ -1.21
HMGB1P44-201ENST00000508597 POLR3GLQ9BT43 218 aa7.48□□□□□ -1.21
HMGB1P44-201ENST00000508597 SPATA31A3Q5VYP0 1347 aa7.48□□□□□ -1.21
HMGB1P44-201ENST00000508597 A0A1W2PP64 1363 aa7.47□□□□□ -1.21
HMGB1P44-201ENST00000508597 TRPM3Q9HCF6 1732 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P44-201ENST00000508597 TNS3Q68CZ2 1445 aa7.47□□□□□ -1.21
HMGB1P44-201ENST00000508597 C2CD2LO14523 706 aa7.47□□□□□ -1.21
HMGB1P44-201ENST00000508597 CTBSQ01459 385 aa7.47□□□□□ -1.21
HMGB1P44-201ENST00000508597 PANK3Q9H999 370 aa7.47□□□□□ -1.21
HMGB1P44-201ENST00000508597 STRN4Q9NRL3 753 aa7.47□□□□□ -1.21
HMGB1P44-201ENST00000508597 BCS1LQ9Y276 419 aa7.47□□□□□ -1.21
HMGB1P44-201ENST00000508597 COL16A1Q07092 1604 aaPredicted RBP7.47□□□□□ -1.21
HMGB1P44-201ENST00000508597 CGNL1Q0VF96 1302 aa7.47□□□□□ -1.21
HMGB1P44-201ENST00000508597 TTC21BQ7Z4L5 1316 aa7.47□□□□□ -1.21
HMGB1P44-201ENST00000508597 NSD2O96028 1365 aa7.46□□□□□ -1.21
HMGB1P44-201ENST00000508597 JCADQ9P266 1359 aa7.46□□□□□ -1.21
HMGB1P44-201ENST00000508597 TATP17735 454 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P44-201ENST00000508597 HSPA1LP34931 641 aa7.46□□□□□ -1.22
HMGB1P44-201ENST00000508597 SWI5Q1ZZU3 235 aa7.46□□□□□ -1.22
HMGB1P44-201ENST00000508597 BICDL1Q6ZP65 573 aa7.46□□□□□ -1.22
HMGB1P44-201ENST00000508597 NLRP13Q86W25 1043 aa7.46□□□□□ -1.22
HMGB1P44-201ENST00000508597 PGBD3Q8N328 593 aa7.46□□□□□ -1.22
HMGB1P44-201ENST00000508597 ABTB2Q8N961 1025 aa7.46□□□□□ -1.22
HMGB1P44-201ENST00000508597 C1orf216Q8TAB5 229 aa7.46□□□□□ -1.22
HMGB1P44-201ENST00000508597 GMCL1Q96IK5 515 aa7.46□□□□□ -1.22
HMGB1P44-201ENST00000508597 QTRT2Q9H974 415 aaKnown RBP7.46□□□□□ -1.22
HMGB1P44-201ENST00000508597 KNSTRNQ9Y448 316 aa7.46□□□□□ -1.22
HMGB1P44-201ENST00000508597 NRKQ7Z2Y5 1582 aa7.46□□□□□ -1.22
HMGB1P44-201ENST00000508597 USP31Q70CQ4 1352 aa7.46□□□□□ -1.22
HMGB1P44-201ENST00000508597 NPC1L1Q9UHC9 1359 aa7.46□□□□□ -1.22
HMGB1P44-201ENST00000508597 SHPRHQ149N8 1683 aa7.45□□□□□ -1.22
HMGB1P44-201ENST00000508597 ALS2Q96Q42 1657 aa7.45□□□□□ -1.22
HMGB1P44-201ENST00000508597 EFHC2Q5JST6 749 aa7.45□□□□□ -1.22
HMGB1P44-201ENST00000508597 CLP1Q92989 425 aaKnown RBP7.45□□□□□ -1.22
HMGB1P44-201ENST00000508597 SAP130Q9H0E3 1048 aa7.45□□□□□ -1.22
HMGB1P44-201ENST00000508597 KLK14Q9P0G3 267 aa7.45□□□□□ -1.22
HMGB1P44-201ENST00000508597 LRFN2Q9ULH4 789 aa7.45□□□□□ -1.22
HMGB1P44-201ENST00000508597 SPATA31A6Q5VVP1 1343 aa7.45□□□□□ -1.22
HMGB1P44-201ENST00000508597 COL22A1Q8NFW1 1626 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P44-201ENST00000508597 USP54Q70EL1 1684 aa7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 NSD3Q9BZ95 1437 aa7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 DCDC2BA2VCK2 349 aa7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 XPCQ01831 940 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 TNP2Q05952 138 aa7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 FAM26DQ5JW98 314 aa7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 C1orf53Q5VUE5 145 aa7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 NLRP8Q86W28 1048 aa7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 KCNH5Q8NCM2 988 aa7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 RHPN1Q8TCX5 695 aa7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 DDX17Q92841 729 aaKnown RBP7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 SUSD3Q96L08 255 aa7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 MKNK1Q9BUB5 465 aa7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 CXXC1Q9P0U4 656 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 PCDHGC4Q9Y5F7 938 aa7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 PNPLA6Q8IY17 1366 aa7.44□□□□□ -1.22
HMGB1P44-201ENST00000508597 KIF20BQ96Q89 1820 aa7.43□□□□□ -1.22
HMGB1P44-201ENST00000508597 MED1Q15648 1581 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P44-201ENST00000508597 PATL2C9JE40 543 aaKnown RBP7.43□□□□□ -1.22
HMGB1P44-201ENST00000508597 FYB1O15117 783 aa7.43□□□□□ -1.22
HMGB1P44-201ENST00000508597 ATXN7O15265 892 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P44-201ENST00000508597 BRD1O95696 1058 aa7.43□□□□□ -1.22
HMGB1P44-201ENST00000508597 MAPTP10636 758 aaKnown RBP7.43□□□□□ -1.22
HMGB1P44-201ENST00000508597 LBRQ14739 615 aaKnown RBP7.43□□□□□ -1.22
HMGB1P44-201ENST00000508597 NAA30Q147X3 362 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P44-201ENST00000508597 PHLDB3Q6NSJ2 640 aa7.43□□□□□ -1.22
HMGB1P44-201ENST00000508597 COG3Q96JB2 828 aa7.43□□□□□ -1.22
HMGB1P44-201ENST00000508597 CFHR5Q9BXR6 569 aa7.43□□□□□ -1.22
HMGB1P44-201ENST00000508597 USP19O94966 1318 aa7.43□□□□□ -1.22
HMGB1P44-201ENST00000508597 PIK3C2AO00443 1686 aa7.42□□□□□ -1.22
HMGB1P44-201ENST00000508597 ZBTB7CA1YPR0 619 aa7.42□□□□□ -1.22
HMGB1P44-201ENST00000508597 KHNYNO15037 678 aaKnown RBP7.42□□□□□ -1.22
HMGB1P44-201ENST00000508597 ADAMTS2O95450 1211 aa7.42□□□□□ -1.22
HMGB1P44-201ENST00000508597 CD33P20138 364 aa7.42□□□□□ -1.22
HMGB1P44-201ENST00000508597 SFSWAPQ12872 951 aaKnown RBP7.42□□□□□ -1.22
HMGB1P44-201ENST00000508597 DDX10Q13206 875 aaKnown RBP7.42□□□□□ -1.22
HMGB1P44-201ENST00000508597 COX20Q5RI15 118 aa7.42□□□□□ -1.22
HMGB1P44-201ENST00000508597 LYPD4Q6UWN0 246 aa7.42□□□□□ -1.22
HMGB1P44-201ENST00000508597 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.42□□□□□ -1.22
HMGB1P44-201ENST00000508597 SEPT3Q9UH03 358 aa7.42□□□□□ -1.22
HMGB1P44-201ENST00000508597 DMGDHQ9UI17 866 aaKnown RBP7.42□□□□□ -1.22
HMGB1P44-201ENST00000508597 ANKRD26Q9UPS8 1709 aa7.41□□□□□ -1.22
HMGB1P44-201ENST00000508597 EFSO43281 561 aa7.41□□□□□ -1.22
HMGB1P44-201ENST00000508597 SLURP2P0DP57 97 aa7.41□□□□□ -1.22
HMGB1P44-201ENST00000508597 GRNP28799 593 aaKnown RBP7.41□□□□□ -1.22
HMGB1P44-201ENST00000508597 KCNA1Q09470 495 aa7.41□□□□□ -1.22
HMGB1P44-201ENST00000508597 B4GALNT3Q6L9W6 998 aa7.41□□□□□ -1.22
HMGB1P44-201ENST00000508597 FOXR1Q6PIV2 292 aa7.41□□□□□ -1.22
HMGB1P44-201ENST00000508597 NME9Q86XW9 330 aa7.41□□□□□ -1.22
HMGB1P44-201ENST00000508597 TRERF1Q96PN7 1200 aa7.41□□□□□ -1.22
HMGB1P44-201ENST00000508597 MBIPQ9NS73 344 aa7.41□□□□□ -1.22
HMGB1P44-201ENST00000508597 CHMP3Q9Y3E7 222 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms