RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 ZAP70P43403 619 aa13.38□□□□□ -0.27
BRCC3P1-201ENST00000508559 BMP2KLQ5H9B9 411 aa13.38□□□□□ -0.27
BRCC3P1-201ENST00000508559 PODNQ7Z5L7 613 aa13.38□□□□□ -0.27
BRCC3P1-201ENST00000508559 TDRD7Q8NHU6 1098 aaKnown RBP13.38□□□□□ -0.27
BRCC3P1-201ENST00000508559 WDR66Q8TBY9 1149 aa13.38□□□□□ -0.27
BRCC3P1-201ENST00000508559 EVI5LQ96CN4 794 aa13.38□□□□□ -0.27
BRCC3P1-201ENST00000508559 FSD1Q9BTV5 496 aa13.38□□□□□ -0.27
BRCC3P1-201ENST00000508559 HMG20BQ9P0W2 317 aa13.38□□□□□ -0.27
BRCC3P1-201ENST00000508559 ABCF2Q9UG63 623 aa13.38□□□□□ -0.27
BRCC3P1-201ENST00000508559 NDUFB9Q9Y6M9 179 aa13.38□□□□□ -0.27
BRCC3P1-201ENST00000508559 BRCA1P38398 1863 aaKnown RBP13.38□□□□□ -0.27
BRCC3P1-201ENST00000508559 LTBP3Q9NS15 1303 aa13.38□□□□□ -0.27
BRCC3P1-201ENST00000508559 IL1R1P14778 569 aa13.37□□□□□ -0.27
BRCC3P1-201ENST00000508559 YBX3P16989 372 aaKnown RBP eCLIP13.37□□□□□ -0.27
BRCC3P1-201ENST00000508559 GTF2IP78347 998 aa13.37□□□□□ -0.27
BRCC3P1-201ENST00000508559 SCARF1Q14162 830 aa13.37□□□□□ -0.27
BRCC3P1-201ENST00000508559 SPTY2D1Q68D10 685 aaPredicted RBP13.37□□□□□ -0.27
BRCC3P1-201ENST00000508559 CASC1Q6TDU7 716 aa13.37□□□□□ -0.27
BRCC3P1-201ENST00000508559 PI16Q6UXB8 463 aa13.37□□□□□ -0.27
BRCC3P1-201ENST00000508559 ZGPATQ8N5A5 531 aaKnown RBP13.37□□□□□ -0.27
BRCC3P1-201ENST00000508559 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.37□□□□□ -0.27
BRCC3P1-201ENST00000508559 LRP2BPQ9P2M1 347 aa13.37□□□□□ -0.27
BRCC3P1-201ENST00000508559 JAG2Q9Y219 1238 aa13.37□□□□□ -0.27
BRCC3P1-201ENST00000508559 IRS2Q9Y4H2 1338 aa13.37□□□□□ -0.27
BRCC3P1-201ENST00000508559 ARAP2Q8WZ64 1704 aa13.36□□□□□ -0.27
BRCC3P1-201ENST00000508559 IDH1O75874 414 aaKnown RBP13.36□□□□□ -0.27
BRCC3P1-201ENST00000508559 SDSP20132 328 aa13.36□□□□□ -0.27
BRCC3P1-201ENST00000508559 LMNB1P20700 586 aa13.36□□□□□ -0.27
BRCC3P1-201ENST00000508559 TTLL5Q6EMB2 1281 aa13.36□□□□□ -0.27
BRCC3P1-201ENST00000508559 ZSCAN25Q6NSZ9 544 aa13.36□□□□□ -0.27
BRCC3P1-201ENST00000508559 TBC1D22AQ8WUA7 517 aa13.36□□□□□ -0.27
BRCC3P1-201ENST00000508559 RAI14Q9P0K7 980 aa13.36□□□□□ -0.27
BRCC3P1-201ENST00000508559 ZNRF3Q9ULT6 936 aa13.36□□□□□ -0.27
BRCC3P1-201ENST00000508559 DUOX1Q9NRD9 1551 aa13.36□□□□□ -0.27
BRCC3P1-201ENST00000508559 ARFGEF1Q9Y6D6 1849 aa13.35□□□□□ -0.27
BRCC3P1-201ENST00000508559 USP17L3A6NCW0 530 aa13.35□□□□□ -0.27
BRCC3P1-201ENST00000508559 USP17L4A6NCW7 530 aa13.35□□□□□ -0.27
BRCC3P1-201ENST00000508559 GSPT1P15170 499 aaKnown RBP13.35□□□□□ -0.27
BRCC3P1-201ENST00000508559 EIF6P56537 245 aaKnown RBP13.35□□□□□ -0.27
BRCC3P1-201ENST00000508559 MAP3K12Q12852 859 aa13.35□□□□□ -0.27
BRCC3P1-201ENST00000508559 USP17L1Q7RTZ2 530 aa13.35□□□□□ -0.27
BRCC3P1-201ENST00000508559 EDC3Q96F86 508 aaKnown RBP13.35□□□□□ -0.27
BRCC3P1-201ENST00000508559 DIAPH3Q9NSV4 1193 aa13.35□□□□□ -0.27
BRCC3P1-201ENST00000508559 SNED1Q8TER0 1413 aa13.35□□□□□ -0.27
BRCC3P1-201ENST00000508559 LTBP1Q14766 1721 aa13.35□□□□□ -0.27
BRCC3P1-201ENST00000508559 PDS5AQ29RF7 1337 aaKnown RBP13.35□□□□□ -0.27
BRCC3P1-201ENST00000508559 HIP1O00291 1037 aa13.34□□□□□ -0.27
BRCC3P1-201ENST00000508559 CYP2E1P05181 493 aaPredicted RBP13.34□□□□□ -0.27
BRCC3P1-201ENST00000508559 LDHBP07195 334 aaKnown RBP13.34□□□□□ -0.27
BRCC3P1-201ENST00000508559 TNIP1Q15025 636 aa13.34□□□□□ -0.27
BRCC3P1-201ENST00000508559 MFSD14BQ5SR56 506 aa13.34□□□□□ -0.27
BRCC3P1-201ENST00000508559 TBC1D9Q6ZT07 1266 aa13.34□□□□□ -0.27
BRCC3P1-201ENST00000508559 ERICH6Q7L0X2 663 aa13.34□□□□□ -0.27
BRCC3P1-201ENST00000508559 DZIP1Q86YF9 867 aaKnown RBP13.34□□□□□ -0.27
BRCC3P1-201ENST00000508559 KBTBD3Q8NAB2 608 aa13.34□□□□□ -0.27
BRCC3P1-201ENST00000508559 RNF181Q9P0P0 153 aa13.34□□□□□ -0.27
BRCC3P1-201ENST00000508559 CDC45O75419 566 aa13.33□□□□□ -0.28
BRCC3P1-201ENST00000508559 RAD17O75943 681 aa13.33□□□□□ -0.28
BRCC3P1-201ENST00000508559 STRIP1Q5VSL9 837 aa13.33□□□□□ -0.28
BRCC3P1-201ENST00000508559 ANTXR1Q9H6X2 564 aa13.33□□□□□ -0.28
BRCC3P1-201ENST00000508559 PIH1D3Q9NQM4 214 aaKnown RBP13.33□□□□□ -0.28
BRCC3P1-201ENST00000508559 FAM205AQ6ZU69 1335 aa13.33□□□□□ -0.28
BRCC3P1-201ENST00000508559 FER1L6Q2WGJ9 1857 aa13.32□□□□□ -0.28
BRCC3P1-201ENST00000508559 SLC9C2Q5TAH2 1124 aa13.32□□□□□ -0.28
BRCC3P1-201ENST00000508559 C9orf131Q5VYM1 1079 aa13.32□□□□□ -0.28
BRCC3P1-201ENST00000508559 CIAPIN1Q6FI81 312 aa13.32□□□□□ -0.28
BRCC3P1-201ENST00000508559 RUFY2Q8WXA3 655 aa13.32□□□□□ -0.28
BRCC3P1-201ENST00000508559 NOL10Q9BSC4 688 aaKnown RBP13.32□□□□□ -0.28
BRCC3P1-201ENST00000508559 F8W031 263 aaPredicted RBP13.31□□□□□ -0.28
BRCC3P1-201ENST00000508559 ZBTB22O15209 634 aa13.31□□□□□ -0.28
BRCC3P1-201ENST00000508559 RNF113AO15541 343 aaKnown RBP13.31□□□□□ -0.28
BRCC3P1-201ENST00000508559 ZFYP08048 801 aaPredicted RBP13.31□□□□□ -0.28
BRCC3P1-201ENST00000508559 GSTO1P78417 241 aa13.31□□□□□ -0.28
BRCC3P1-201ENST00000508559 SLF2Q8IX21 1173 aa13.31□□□□□ -0.28
BRCC3P1-201ENST00000508559 KCNQ5Q9NR82 932 aa13.31□□□□□ -0.28
BRCC3P1-201ENST00000508559 GJA3Q9Y6H8 435 aa13.31□□□□□ -0.28
BRCC3P1-201ENST00000508559 MAST3O60307 1309 aa13.31□□□□□ -0.28
BRCC3P1-201ENST00000508559 YDJCA8MPS7 323 aa13.3□□□□□ -0.28
BRCC3P1-201ENST00000508559 PSMD14O00487 310 aa13.3□□□□□ -0.28
BRCC3P1-201ENST00000508559 EIF5BO60841 1220 aaKnown RBP13.3□□□□□ -0.28
BRCC3P1-201ENST00000508559 LDHCP07864 332 aa13.3□□□□□ -0.28
BRCC3P1-201ENST00000508559 CYP7A1P22680 504 aa13.3□□□□□ -0.28
BRCC3P1-201ENST00000508559 NAA16Q6N069 864 aaPredicted RBP13.3□□□□□ -0.28
BRCC3P1-201ENST00000508559 TICAM2Q86XR7 235 aa13.3□□□□□ -0.28
BRCC3P1-201ENST00000508559 MAGEB6Q8N7X4 407 aa13.3□□□□□ -0.28
BRCC3P1-201ENST00000508559 SUGT1Q9Y2Z0 365 aa13.3□□□□□ -0.28
BRCC3P1-201ENST00000508559 MYO3BQ8WXR4 1341 aa13.3□□□□□ -0.28
BRCC3P1-201ENST00000508559 SALL1Q9NSC2 1324 aa13.3□□□□□ -0.28
BRCC3P1-201ENST00000508559 COL1A1P02452 1464 aaPredicted RBP13.29□□□□□ -0.28
BRCC3P1-201ENST00000508559 MYH13Q9UKX3 1938 aa13.29□□□□□ -0.28
BRCC3P1-201ENST00000508559 PDE6AP16499 860 aa13.29□□□□□ -0.28
BRCC3P1-201ENST00000508559 PRDX5P30044 214 aa13.29□□□□□ -0.28
BRCC3P1-201ENST00000508559 RBM5P52756 815 aaKnown RBP eCLIP13.29□□□□□ -0.28
BRCC3P1-201ENST00000508559 FKBP1AP62942 108 aaKnown RBP13.29□□□□□ -0.28
BRCC3P1-201ENST00000508559 CXCL9Q07325 125 aa13.29□□□□□ -0.28
BRCC3P1-201ENST00000508559 DACT2Q5SW24 774 aa13.29□□□□□ -0.28
BRCC3P1-201ENST00000508559 RSBN1LQ6PCB5 846 aaPredicted RBP13.29□□□□□ -0.28
BRCC3P1-201ENST00000508559 OGFOD1Q8N543 542 aa13.29□□□□□ -0.28
BRCC3P1-201ENST00000508559 MXD3Q9BW11 206 aa13.29□□□□□ -0.28
BRCC3P1-201ENST00000508559 HDAC9Q9UKV0 1011 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms