RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 IL1R1P14778 569 aa10.59□□□□□ -0.71
USP46-207ENST00000508499 ARID4AP29374 1257 aaPredicted RBP10.59□□□□□ -0.71
USP46-207ENST00000508499 AACSQ86V21 672 aa10.59□□□□□ -0.71
USP46-207ENST00000508499 IFNLR1Q8IU57 520 aaPredicted RBP10.59□□□□□ -0.71
USP46-207ENST00000508499 KLHL34Q8N239 644 aa10.59□□□□□ -0.71
USP46-207ENST00000508499 HELBQ8NG08 1087 aaPredicted RBP10.59□□□□□ -0.71
USP46-207ENST00000508499 XAGE2Q96GT9 111 aa10.59□□□□□ -0.71
USP46-207ENST00000508499 BCS1LQ9Y276 419 aa10.59□□□□□ -0.71
USP46-207ENST00000508499 SCN9AQ15858 1988 aa10.59□□□□□ -0.71
USP46-207ENST00000508499 GOLGB1Q14789 3259 aaKnown RBP10.59□□□□□ -0.71
USP46-207ENST00000508499 NFKBIEO00221 500 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 GRIN3BO60391 1043 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 IFIT2P09913 472 aaKnown RBP10.58□□□□□ -0.72
USP46-207ENST00000508499 ATP5JP18859 108 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 MX1P20591 662 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 TIMM10P62072 90 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 WASHC4Q2M389 1173 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 CAVIN4Q5BKX8 364 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 PODNQ7Z5L7 613 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 GPATCH3Q96I76 525 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 FAM84BQ96KN1 310 aaPredicted RBP10.58□□□□□ -0.72
USP46-207ENST00000508499 COA1Q9GZY4 146 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 TAOK3Q9H2K8 898 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 IL1RAPL2Q9NP60 686 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 MAST2Q6P0Q8 1798 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 SMARCA5O60264 1052 aaPredicted RBP10.58□□□□□ -0.72
USP46-207ENST00000508499 UQCRFS1P1P0C7P4 283 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 KCNJ4P48050 445 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 PDE1AP54750 535 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 CCDC158Q5M9N0 1113 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 CCDC102BQ68D86 513 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 TMED8Q6PL24 325 aaPredicted RBP10.58□□□□□ -0.72
USP46-207ENST00000508499 OLFM4Q6UX06 510 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 ZNF804AQ7Z570 1209 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 PLEKHM2Q8IWE5 1019 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 TDRD7Q8NHU6 1098 aaKnown RBP10.58□□□□□ -0.72
USP46-207ENST00000508499 ZC3H12CQ9C0D7 883 aaKnown RBP10.58□□□□□ -0.72
USP46-207ENST00000508499 LNPKQ9C0E8 428 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 ECHDC1Q9NTX5 307 aa10.58□□□□□ -0.72
USP46-207ENST00000508499 ZC3H4Q9UPT8 1303 aaKnown RBP10.57□□□□□ -0.72
USP46-207ENST00000508499 MYO5AQ9Y4I1 1855 aaKnown RBP10.57□□□□□ -0.72
USP46-207ENST00000508499 C6orf229H3BNL8 230 aa10.57□□□□□ -0.72
USP46-207ENST00000508499 ERC2O15083 957 aa10.57□□□□□ -0.72
USP46-207ENST00000508499 YBX3P16989 372 aaKnown RBP eCLIP10.57□□□□□ -0.72
USP46-207ENST00000508499 PDE4AP27815 886 aa10.57□□□□□ -0.72
USP46-207ENST00000508499 HIBADHP31937 336 aaKnown RBP10.57□□□□□ -0.72
USP46-207ENST00000508499 SLC51AQ86UW1 340 aa10.57□□□□□ -0.72
USP46-207ENST00000508499 TXNRD3Q86VQ6 643 aa10.57□□□□□ -0.72
USP46-207ENST00000508499 PI4K2BQ8TCG2 481 aa10.57□□□□□ -0.72
USP46-207ENST00000508499 DBNDD2Q9BQY9 259 aa10.57□□□□□ -0.72
USP46-207ENST00000508499 GNL3LQ9NVN8 582 aaKnown RBP10.57□□□□□ -0.72
USP46-207ENST00000508499 SALL1Q9NSC2 1324 aa10.56□□□□□ -0.72
USP46-207ENST00000508499 COL4A5P29400 1685 aa10.56□□□□□ -0.72
USP46-207ENST00000508499 WTIPA6NIX2 430 aaPredicted RBP10.56□□□□□ -0.72
USP46-207ENST00000508499 SNAP23O00161 211 aa10.56□□□□□ -0.72
USP46-207ENST00000508499 APBB1O00213 710 aa10.56□□□□□ -0.72
USP46-207ENST00000508499 GLRX3O76003 335 aaKnown RBP10.56□□□□□ -0.72
USP46-207ENST00000508499 ADORA1P30542 326 aa10.56□□□□□ -0.72
USP46-207ENST00000508499 IARSP41252 1262 aaKnown RBP10.56□□□□□ -0.72
USP46-207ENST00000508499 FKBP1AP62942 108 aaKnown RBP10.56□□□□□ -0.72
USP46-207ENST00000508499 NEUROD6Q96NK8 337 aa10.56□□□□□ -0.72
USP46-207ENST00000508499 CCDC8Q9H0W5 538 aaPredicted RBP10.56□□□□□ -0.72
USP46-207ENST00000508499 CD209Q9NNX6 404 aa10.56□□□□□ -0.72
USP46-207ENST00000508499 TLR7Q9NYK1 1049 aaKnown RBP10.56□□□□□ -0.72
USP46-207ENST00000508499 TRPC6Q9Y210 931 aa10.56□□□□□ -0.72
USP46-207ENST00000508499 FAM205AQ6ZU69 1335 aa10.56□□□□□ -0.72
USP46-207ENST00000508499 LMNB1P20700 586 aa10.55□□□□□ -0.72
USP46-207ENST00000508499 KLRK1P26718 216 aa10.55□□□□□ -0.72
USP46-207ENST00000508499 PHKA1P46020 1223 aa10.55□□□□□ -0.72
USP46-207ENST00000508499 MMP14P50281 582 aa10.55□□□□□ -0.72
USP46-207ENST00000508499 C16orf71Q8IYS4 520 aaPredicted RBP10.55□□□□□ -0.72
USP46-207ENST00000508499 HAUS7Q99871 368 aa10.55□□□□□ -0.72
USP46-207ENST00000508499 DENND2AQ9ULE3 1009 aa10.55□□□□□ -0.72
USP46-207ENST00000508499 RFX7Q2KHR2 1363 aa10.55□□□□□ -0.72
USP46-207ENST00000508499 COL1A1P02452 1464 aaPredicted RBP10.54□□□□□ -0.72
USP46-207ENST00000508499 FZD9O00144 591 aa10.54□□□□□ -0.72
USP46-207ENST00000508499 SEC24BO95487 1268 aa10.54□□□□□ -0.72
USP46-207ENST00000508499 GYG1P46976 350 aa10.54□□□□□ -0.72
USP46-207ENST00000508499 BCAMP50895 628 aa10.54□□□□□ -0.72
USP46-207ENST00000508499 GORABQ5T7V8 394 aa10.54□□□□□ -0.72
USP46-207ENST00000508499 VPS37DQ86XT2 251 aa10.54□□□□□ -0.72
USP46-207ENST00000508499 OTUD7AQ8TE49 926 aaPredicted RBP10.54□□□□□ -0.72
USP46-207ENST00000508499 COLQQ9Y215 455 aaPredicted RBP10.54□□□□□ -0.72
USP46-207ENST00000508499 SUGT1Q9Y2Z0 365 aa10.54□□□□□ -0.72
USP46-207ENST00000508499 ECM29Q5VYK3 1845 aa10.53□□□□□ -0.72
USP46-207ENST00000508499 PPIP5K2O43314 1243 aa10.53□□□□□ -0.72
USP46-207ENST00000508499 MCAMP43121 646 aa10.53□□□□□ -0.72
USP46-207ENST00000508499 PRELPP51888 382 aa10.53□□□□□ -0.72
USP46-207ENST00000508499 RASGRF1Q13972 1273 aa10.53□□□□□ -0.72
USP46-207ENST00000508499 AOC3Q16853 763 aa10.53□□□□□ -0.72
USP46-207ENST00000508499 BMP2KLQ5H9B9 411 aa10.53□□□□□ -0.72
USP46-207ENST00000508499 TTC39AQ5SRH9 613 aa10.53□□□□□ -0.72
USP46-207ENST00000508499 IER5LQ5T953 404 aa10.53□□□□□ -0.72
USP46-207ENST00000508499 STRIP1Q5VSL9 837 aa10.53□□□□□ -0.72
USP46-207ENST00000508499 ZGPATQ8N5A5 531 aaKnown RBP10.53□□□□□ -0.72
USP46-207ENST00000508499 SPATA5Q8NB90 893 aa10.53□□□□□ -0.72
USP46-207ENST00000508499 WDR66Q8TBY9 1149 aa10.53□□□□□ -0.72
USP46-207ENST00000508499 TBC1D22AQ8WUA7 517 aa10.53□□□□□ -0.72
USP46-207ENST00000508499 ZNRF3Q9ULT6 936 aa10.53□□□□□ -0.72
USP46-207ENST00000508499 ECE2O60344 883 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms