RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 MRS2Q9HD23 443 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 AK5Q9Y6K8 562 aa2.93□□□□□ -1.94
SMN2-208ENST00000508258 CPNE3O75131 537 aaKnown RBP2.92□□□□□ -1.94
SMN2-208ENST00000508258 DEAF1O75398 565 aaPredicted RBP2.92□□□□□ -1.94
SMN2-208ENST00000508258 TNFRSF21O75509 655 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 SOX18P35713 384 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 ATP11AP98196 1134 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 PRSS36Q5K4E3 855 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 NKAPLQ5M9Q1 402 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 XP32Q5T750 250 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 PDE12Q6L8Q7 609 aaKnown RBP2.92□□□□□ -1.94
SMN2-208ENST00000508258 IGF2-ASQ6U949 168 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 OR13H1Q8NG92 308 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 WFDC12Q8WWY7 111 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 TTC9Q92623 222 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 RNF34Q969K3 372 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 TGIF2Q9GZN2 237 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 AKTIPQ9H8T0 292 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 ZFYVE28Q9HCC9 887 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 ABI2Q9NYB9 513 aaPredicted RBP2.92□□□□□ -1.94
SMN2-208ENST00000508258 KANSL3Q9P2N6 904 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 VTI1BQ9UEU0 232 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 PPME1Q9Y570 386 aa2.92□□□□□ -1.94
SMN2-208ENST00000508258 LINC01387J3KSC0 135 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 GIPC1O14908 333 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 ALX3O95076 343 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 CYP2E1P05181 493 aaPredicted RBP2.91□□□□□ -1.94
SMN2-208ENST00000508258 GLB1P16278 677 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 NOS3P29474 1203 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 CDC27P30260 824 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 ZNF76P36508 570 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 PTPN12Q05209 780 aaKnown RBP2.91□□□□□ -1.94
SMN2-208ENST00000508258 COL13A1Q5TAT6 717 aaPredicted RBP2.91□□□□□ -1.94
SMN2-208ENST00000508258 USPL1Q5W0Q7 1092 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 FAM117BQ6P1L5 589 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 SLC43A3Q8NBI5 491 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 DCAF11Q8TEB1 546 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 CCDC74AQ96AQ1 378 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 CRELD1Q96HD1 420 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 TINF2Q9BSI4 451 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 OSBPL7Q9BZF2 842 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 MUC3BQ9H195 1237 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 RASSF4Q9H2L5 321 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 ELP3Q9H9T3 547 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 TMEM63CQ9P1W3 806 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 FOXD3Q9UJU5 478 aaPredicted RBP2.91□□□□□ -1.94
SMN2-208ENST00000508258 SPG7Q9UQ90 795 aa2.91□□□□□ -1.94
SMN2-208ENST00000508258 USP31Q70CQ4 1352 aa2.9□□□□□ -1.94
SMN2-208ENST00000508258 H2AFB1P0C5Y9 115 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 H2AFB2P0C5Z0 115 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 CES1P23141 567 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 EIF4BP23588 611 aaKnown RBP2.9□□□□□ -1.95
SMN2-208ENST00000508258 ITGB7P26010 798 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 CABP4P57796 275 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 SF3A1Q15459 793 aaKnown RBP2.9□□□□□ -1.95
SMN2-208ENST00000508258 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.9□□□□□ -1.95
SMN2-208ENST00000508258 PI16Q6UXB8 463 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 NBPF11Q86T75 865 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 MAP4K3Q8IVH8 894 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 AGGF1Q8N302 714 aaeCLIP2.9□□□□□ -1.95
SMN2-208ENST00000508258 EPS8L3Q8TE67 593 aaKnown RBP2.9□□□□□ -1.95
SMN2-208ENST00000508258 SNX29Q8TEQ0 813 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 UBXN4Q92575 508 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 MEGF10Q96KG7 1140 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 GMLQ99445 158 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 CARD10Q9BWT7 1032 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 MRPL18Q9H0U6 180 aaKnown RBP2.9□□□□□ -1.95
SMN2-208ENST00000508258 CHRDQ9H2X0 955 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 C12orf49Q9H741 205 aa2.9□□□□□ -1.95
SMN2-208ENST00000508258 SRA1Q9HD15 236 aaKnown RBP2.9□□□□□ -1.95
SMN2-208ENST00000508258 SH2B1Q9NRF2 756 aaPredicted RBP2.9□□□□□ -1.95
SMN2-208ENST00000508258 DDX41Q9UJV9 622 aaKnown RBP2.9□□□□□ -1.95
SMN2-208ENST00000508258 F8W735 103 aaPredicted RBP2.89□□□□□ -1.95
SMN2-208ENST00000508258 DLL1O00548 723 aa2.89□□□□□ -1.95
SMN2-208ENST00000508258 HOXD8P13378 290 aaPredicted RBP2.89□□□□□ -1.95
SMN2-208ENST00000508258 PTPRAP18433 802 aa2.89□□□□□ -1.95
SMN2-208ENST00000508258 CD68P34810 354 aaPredicted RBP2.89□□□□□ -1.95
SMN2-208ENST00000508258 ST13P50502 369 aaKnown RBP2.89□□□□□ -1.95
SMN2-208ENST00000508258 RACK1P63244 317 aaKnown RBP2.89□□□□□ -1.95
SMN2-208ENST00000508258 SETDB1Q15047 1291 aa2.89□□□□□ -1.95
SMN2-208ENST00000508258 ACAD11Q709F0 780 aa2.89□□□□□ -1.95
SMN2-208ENST00000508258 GALNT12Q8IXK2 581 aa2.89□□□□□ -1.95
SMN2-208ENST00000508258 CACTIN-AS1Q8N1I8 211 aa2.89□□□□□ -1.95
SMN2-208ENST00000508258 C1orf127Q8N9H9 656 aa2.89□□□□□ -1.95
SMN2-208ENST00000508258 SLC7A3Q8WY07 619 aa2.89□□□□□ -1.95
SMN2-208ENST00000508258 PBX4Q9BYU1 374 aa2.89□□□□□ -1.95
SMN2-208ENST00000508258 SRCIN1Q9C0H9 1055 aa2.89□□□□□ -1.95
SMN2-208ENST00000508258 ACBD3Q9H3P7 528 aa2.89□□□□□ -1.95
SMN2-208ENST00000508258 ZFP64Q9NPA5 681 aa2.89□□□□□ -1.95
SMN2-208ENST00000508258 NLRP2Q9NX02 1062 aa2.89□□□□□ -1.95
SMN2-208ENST00000508258 CNTN3Q9P232 1028 aa2.89□□□□□ -1.95
SMN2-208ENST00000508258 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.89□□□□□ -1.95
SMN2-208ENST00000508258 FSCN2O14926 492 aa2.88□□□□□ -1.95
SMN2-208ENST00000508258 EREGO14944 169 aa2.88□□□□□ -1.95
SMN2-208ENST00000508258 SART1O43290 800 aaKnown RBP2.88□□□□□ -1.95
SMN2-208ENST00000508258 PHACTR2O75167 634 aa2.88□□□□□ -1.95
SMN2-208ENST00000508258 TRPA1O75762 1119 aa2.88□□□□□ -1.95
SMN2-208ENST00000508258 WISP1O95388 367 aa2.88□□□□□ -1.95
SMN2-208ENST00000508258 ACPPP15309 386 aa2.88□□□□□ -1.95
SMN2-208ENST00000508258 EPHA1P21709 976 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms