RNA–Protein interactions for RNA: ENST00000508075.1

NEDD4-207, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 965 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-207ENST00000508075 PAPPA2Q9BXP8 1791 aa18.17■□□□□ 0.5
NEDD4-207ENST00000508075 ECM29Q5VYK3 1845 aa18.17■□□□□ 0.5
NEDD4-207ENST00000508075 CLRN2A0PK11 232 aa18.17■□□□□ 0.5
NEDD4-207ENST00000508075 ZNF804AQ7Z570 1209 aa18.17■□□□□ 0.5
NEDD4-207ENST00000508075 USP44Q9H0E7 712 aa18.17■□□□□ 0.5
NEDD4-207ENST00000508075 UTYO14607 1347 aa18.17■□□□□ 0.5
NEDD4-207ENST00000508075 MYO3BQ8WXR4 1341 aa18.17■□□□□ 0.5
NEDD4-207ENST00000508075 BRPF1P55201 1214 aaPredicted RBP18.16■□□□□ 0.5
NEDD4-207ENST00000508075 NOGQ13253 232 aa18.16■□□□□ 0.5
NEDD4-207ENST00000508075 GRIK5Q16478 980 aa18.16■□□□□ 0.5
NEDD4-207ENST00000508075 RASAL3Q86YV0 1011 aa18.16■□□□□ 0.5
NEDD4-207ENST00000508075 SLC10A3P09131 477 aa18.15■□□□□ 0.5
NEDD4-207ENST00000508075 IL1R1P14778 569 aa18.15■□□□□ 0.5
NEDD4-207ENST00000508075 C15orf52Q6ZUT6 534 aaKnown RBP18.15■□□□□ 0.5
NEDD4-207ENST00000508075 HDAC9Q9UKV0 1011 aa18.15■□□□□ 0.5
NEDD4-207ENST00000508075 NOB1Q9ULX3 412 aaKnown RBP18.15■□□□□ 0.5
NEDD4-207ENST00000508075 RIPOR2Q9Y4F9 1068 aa18.15■□□□□ 0.5
NEDD4-207ENST00000508075 PTPRCP08575 1304 aa18.15■□□□□ 0.5
NEDD4-207ENST00000508075 PITPNM2Q9BZ72 1349 aa18.15■□□□□ 0.5
NEDD4-207ENST00000508075 CHAF1AQ13111 956 aaPredicted RBP18.14■□□□□ 0.49
NEDD4-207ENST00000508075 DLGAP5Q15398 846 aa18.14■□□□□ 0.49
NEDD4-207ENST00000508075 RABL6Q3YEC7 729 aaPredicted RBP18.14■□□□□ 0.49
NEDD4-207ENST00000508075 CFAP100Q494V2 611 aa18.14■□□□□ 0.49
NEDD4-207ENST00000508075 TRMT2AQ8IZ69 625 aaKnown RBP18.14■□□□□ 0.49
NEDD4-207ENST00000508075 ZBED3Q96IU2 234 aaPredicted RBP18.14■□□□□ 0.49
NEDD4-207ENST00000508075 FAM84BQ96KN1 310 aaPredicted RBP18.14■□□□□ 0.49
NEDD4-207ENST00000508075 PRMT6Q96LA8 375 aaPredicted RBP18.14■□□□□ 0.49
NEDD4-207ENST00000508075 TNNQ9UQP3 1299 aa18.14■□□□□ 0.49
NEDD4-207ENST00000508075 TRPA1O75762 1119 aa18.13■□□□□ 0.49
NEDD4-207ENST00000508075 RBM5P52756 815 aaKnown RBP eCLIP18.13■□□□□ 0.49
NEDD4-207ENST00000508075 METTL24Q5JXM2 366 aa18.13■□□□□ 0.49
NEDD4-207ENST00000508075 ABHD8Q96I13 439 aa18.13■□□□□ 0.49
NEDD4-207ENST00000508075 CSRNP1Q96S65 589 aa18.13■□□□□ 0.49
NEDD4-207ENST00000508075 VEZTQ9HBM0 779 aa18.13■□□□□ 0.49
NEDD4-207ENST00000508075 CCDC102AQ96A19 550 aa18.12■□□□□ 0.49
NEDD4-207ENST00000508075 RNF186Q9NXI6 227 aa18.12■□□□□ 0.49
NEDD4-207ENST00000508075 ARAP2Q8WZ64 1704 aa18.12■□□□□ 0.49
NEDD4-207ENST00000508075 HIBADHP31937 336 aaKnown RBP18.11■□□□□ 0.49
NEDD4-207ENST00000508075 PTPN12Q05209 780 aaKnown RBP18.11■□□□□ 0.49
NEDD4-207ENST00000508075 UBE4AQ14139 1066 aa18.11■□□□□ 0.49
NEDD4-207ENST00000508075 MFSD14BQ5SR56 506 aa18.11■□□□□ 0.49
NEDD4-207ENST00000508075 TDRD7Q8NHU6 1098 aaKnown RBP18.11■□□□□ 0.49
NEDD4-207ENST00000508075 MYH13Q9UKX3 1938 aa18.1■□□□□ 0.49
NEDD4-207ENST00000508075 SSC5DA1L4H1 1573 aa18.1■□□□□ 0.49
NEDD4-207ENST00000508075 CCER2I3L3R5 266 aa18.1■□□□□ 0.49
NEDD4-207ENST00000508075 RFX5P48382 616 aaPredicted RBP18.1■□□□□ 0.49
NEDD4-207ENST00000508075 BCAMP50895 628 aa18.1■□□□□ 0.49
NEDD4-207ENST00000508075 ALDH1L2Q3SY69 923 aa18.1■□□□□ 0.49
NEDD4-207ENST00000508075 SIL1Q9H173 461 aa18.1■□□□□ 0.49
NEDD4-207ENST00000508075 ANGEL1Q9UNK9 670 aaKnown RBP18.1■□□□□ 0.49
NEDD4-207ENST00000508075 TTF2Q9UNY4 1162 aaKnown RBP18.1■□□□□ 0.49
NEDD4-207ENST00000508075 MROH5Q6ZUA9 1318 aa18.09■□□□□ 0.49
NEDD4-207ENST00000508075 APOBEC3FQ8IUX4 373 aaKnown RBP18.09■□□□□ 0.49
NEDD4-207ENST00000508075 CDAN1Q8IWY9 1227 aa18.09■□□□□ 0.49
NEDD4-207ENST00000508075 MIER1Q8N108 512 aa18.09■□□□□ 0.49
NEDD4-207ENST00000508075 VGLL2Q8N8G2 317 aa18.09■□□□□ 0.49
NEDD4-207ENST00000508075 DEFB129Q9H1M3 183 aa18.09■□□□□ 0.49
NEDD4-207ENST00000508075 TDRD3Q9H7E2 651 aaKnown RBP18.09■□□□□ 0.49
NEDD4-207ENST00000508075 FAM205AQ6ZU69 1335 aa18.08■□□□□ 0.49
NEDD4-207ENST00000508075 SPDYE2BA6NHP3 402 aa18.08■□□□□ 0.48
NEDD4-207ENST00000508075 CCDC85CA6NKD9 419 aa18.08■□□□□ 0.48
NEDD4-207ENST00000508075 SPDYE6P0CI01 402 aa18.08■□□□□ 0.48
NEDD4-207ENST00000508075 DGKZQ13574 1117 aa18.08■□□□□ 0.48
NEDD4-207ENST00000508075 NBPF12Q5TAG4 269 aaPredicted RBP18.08■□□□□ 0.48
NEDD4-207ENST00000508075 CLMNQ96JQ2 1002 aa18.08■□□□□ 0.48
NEDD4-207ENST00000508075 MCOLN1Q9GZU1 580 aa18.08■□□□□ 0.48
NEDD4-207ENST00000508075 PA2G4Q9UQ80 394 aaKnown RBP18.08■□□□□ 0.48
NEDD4-207ENST00000508075 PDE8BO95263 885 aa18.07■□□□□ 0.48
NEDD4-207ENST00000508075 NF2P35240 595 aa18.07■□□□□ 0.48
NEDD4-207ENST00000508075 RARSP54136 660 aaKnown RBP18.07■□□□□ 0.48
NEDD4-207ENST00000508075 FBXO33Q7Z6M2 555 aa18.07■□□□□ 0.48
NEDD4-207ENST00000508075 VPS37DQ86XT2 251 aa18.07■□□□□ 0.48
NEDD4-207ENST00000508075 MEIS3Q99687 375 aa18.07■□□□□ 0.48
NEDD4-207ENST00000508075 LRRFIP2Q9Y608 721 aaKnown RBP18.07■□□□□ 0.48
NEDD4-207ENST00000508075 OTOFQ9HC10 1997 aa18.06■□□□□ 0.48
NEDD4-207ENST00000508075 CA12O43570 354 aa18.06■□□□□ 0.48
NEDD4-207ENST00000508075 FRAT2O75474 233 aaPredicted RBP18.06■□□□□ 0.48
NEDD4-207ENST00000508075 TBC1D8O95759 1140 aa18.06■□□□□ 0.48
NEDD4-207ENST00000508075 UBTFL1P0CB47 393 aaPredicted RBP18.06■□□□□ 0.48
NEDD4-207ENST00000508075 CACNB3P54284 484 aa18.06■□□□□ 0.48
NEDD4-207ENST00000508075 FKBP1BP68106 108 aa18.06■□□□□ 0.48
NEDD4-207ENST00000508075 TCP10L2B9ZVM9 353 aa18.05■□□□□ 0.48
NEDD4-207ENST00000508075 ATG9AQ7Z3C6 839 aa18.05■□□□□ 0.48
NEDD4-207ENST00000508075 ARMC9Q7Z3E5 817 aa18.05■□□□□ 0.48
NEDD4-207ENST00000508075 MTMR14Q8NCE2 650 aa18.05■□□□□ 0.48
NEDD4-207ENST00000508075 ZNF70Q9UC06 446 aaPredicted RBP18.05■□□□□ 0.48
NEDD4-207ENST00000508075 EYA2O00167 538 aa18.04■□□□□ 0.48
NEDD4-207ENST00000508075 BCAR3O75815 825 aa18.04■□□□□ 0.48
NEDD4-207ENST00000508075 CRKP46108 304 aa18.04■□□□□ 0.48
NEDD4-207ENST00000508075 FKBP1AP62942 108 aaKnown RBP18.04■□□□□ 0.48
NEDD4-207ENST00000508075 RASA3Q14644 834 aa18.04■□□□□ 0.48
NEDD4-207ENST00000508075 R3HDMLQ9H3Y0 253 aa18.04■□□□□ 0.48
NEDD4-207ENST00000508075 COL1A1P02452 1464 aaPredicted RBP18.03■□□□□ 0.48
NEDD4-207ENST00000508075 MYO1BO43795 1136 aa18.03■□□□□ 0.48
NEDD4-207ENST00000508075 FGFR2P21802 821 aa18.03■□□□□ 0.48
NEDD4-207ENST00000508075 CAVIN4Q5BKX8 364 aa18.03■□□□□ 0.48
NEDD4-207ENST00000508075 DZIP1LQ8IYY4 767 aaKnown RBP18.03■□□□□ 0.48
NEDD4-207ENST00000508075 FRAT1Q92837 279 aaPredicted RBP18.03■□□□□ 0.48
NEDD4-207ENST00000508075 CLUAP1Q96AJ1 413 aa18.03■□□□□ 0.48
NEDD4-207ENST00000508075 PUM3Q15397 648 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms