RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TXLNBQ8N3L3 684 aa20.57■□□□□ 0.88
NUP54-205ENST00000507257 MPHOSPH8Q99549 860 aa20.57■□□□□ 0.88
NUP54-205ENST00000507257 LRRC2Q9BYS8 371 aa20.57■□□□□ 0.88
NUP54-205ENST00000507257 GOLGA6L9A6NEM1 432 aa20.57■□□□□ 0.88
NUP54-205ENST00000507257 ZSCAN12O43309 604 aa20.57■□□□□ 0.88
NUP54-205ENST00000507257 FDPSP14324 419 aaKnown RBP20.57■□□□□ 0.88
NUP54-205ENST00000507257 KCNH5Q8NCM2 988 aa20.57■□□□□ 0.88
NUP54-205ENST00000507257 SEC62Q99442 399 aaKnown RBP20.57■□□□□ 0.88
NUP54-205ENST00000507257 METTL22Q9BUU2 404 aaPredicted RBP20.57■□□□□ 0.88
NUP54-205ENST00000507257 TUBE1Q9UJT0 475 aa20.57■□□□□ 0.88
NUP54-205ENST00000507257 ERICH4A6NGS2 130 aa20.56■□□□□ 0.88
NUP54-205ENST00000507257 SPTLC2O15270 562 aa20.56■□□□□ 0.88
NUP54-205ENST00000507257 CMA1P23946 247 aa20.56■□□□□ 0.88
NUP54-205ENST00000507257 EPHA10Q5JZY3 1008 aa20.56■□□□□ 0.88
NUP54-205ENST00000507257 RIC3Q7Z5B4 369 aa20.56■□□□□ 0.88
NUP54-205ENST00000507257 MNS1Q8NEH6 495 aa20.56■□□□□ 0.88
NUP54-205ENST00000507257 KLHDC4Q8TBB5 520 aa20.56■□□□□ 0.88
NUP54-205ENST00000507257 DDX60Q8IY21 1712 aaKnown RBP20.56■□□□□ 0.88
NUP54-205ENST00000507257 TMEM94Q12767 1356 aa20.56■□□□□ 0.88
NUP54-205ENST00000507257 E7EWF7 191 aa20.55■□□□□ 0.88
NUP54-205ENST00000507257 CDK11BP21127 795 aaKnown RBP20.55■□□□□ 0.88
NUP54-205ENST00000507257 TFCP2Q12800 502 aa20.55■□□□□ 0.88
NUP54-205ENST00000507257 SF3A1Q15459 793 aaKnown RBP20.55■□□□□ 0.88
NUP54-205ENST00000507257 REXO1L1PQ8IX06 675 aa20.55■□□□□ 0.88
NUP54-205ENST00000507257 NPHP1O15259 732 aa20.55■□□□□ 0.88
NUP54-205ENST00000507257 ZNF202O95125 648 aa20.55■□□□□ 0.88
NUP54-205ENST00000507257 HNRNPH2P55795 449 aaKnown RBP20.55■□□□□ 0.88
NUP54-205ENST00000507257 ZMYM1Q5SVZ6 1142 aa20.55■□□□□ 0.88
NUP54-205ENST00000507257 BCL11BQ9C0K0 894 aaPredicted RBP20.55■□□□□ 0.88
NUP54-205ENST00000507257 HSD3B7Q9H2F3 369 aa20.55■□□□□ 0.88
NUP54-205ENST00000507257 PARP3Q9Y6F1 533 aa20.55■□□□□ 0.88
NUP54-205ENST00000507257 FAM237AA0A1B0GTK4 181 aa20.54■□□□□ 0.88
NUP54-205ENST00000507257 CCT2P78371 535 aaKnown RBP20.54■□□□□ 0.88
NUP54-205ENST00000507257 MYSM1Q5VVJ2 828 aa20.54■□□□□ 0.88
NUP54-205ENST00000507257 GPR161Q8N6U8 529 aaKnown RBP20.54■□□□□ 0.88
NUP54-205ENST00000507257 GPR108Q9NPR9 543 aa20.54■□□□□ 0.88
NUP54-205ENST00000507257 C5P01031 1676 aa20.53■□□□□ 0.88
NUP54-205ENST00000507257 ARHGAP6O43182 974 aa20.53■□□□□ 0.88
NUP54-205ENST00000507257 DHX16O60231 1041 aaKnown RBP20.53■□□□□ 0.88
NUP54-205ENST00000507257 AXDND1Q5T1B0 1012 aaPredicted RBP20.53■□□□□ 0.88
NUP54-205ENST00000507257 FBXO18Q8NFZ0 1043 aa20.53■□□□□ 0.88
NUP54-205ENST00000507257 ERCC4Q92889 916 aaPredicted RBP20.53■□□□□ 0.88
NUP54-205ENST00000507257 DBNDD2Q9BQY9 259 aa20.53■□□□□ 0.88
NUP54-205ENST00000507257 VSTM4Q8IW00 320 aa20.53■□□□□ 0.88
NUP54-205ENST00000507257 NCOA5Q9HCD5 579 aaKnown RBP20.53■□□□□ 0.88
NUP54-205ENST00000507257 CLIC4Q9Y696 253 aa20.53■□□□□ 0.88
NUP54-205ENST00000507257 AFDNP55196 1824 aaKnown RBP20.52■□□□□ 0.88
NUP54-205ENST00000507257 PRAMEF22A3QJZ6 481 aa20.52■□□□□ 0.88
NUP54-205ENST00000507257 GPS2Q13227 327 aa20.52■□□□□ 0.88
NUP54-205ENST00000507257 CAPN2P17655 700 aa20.51■□□□□ 0.87
NUP54-205ENST00000507257 FOSBP53539 338 aa20.51■□□□□ 0.87
NUP54-205ENST00000507257 MYL5Q02045 173 aa20.51■□□□□ 0.87
NUP54-205ENST00000507257 DDX46Q7L014 1031 aaKnown RBP20.51■□□□□ 0.87
NUP54-205ENST00000507257 ANKRD24Q8TF21 1146 aa20.51■□□□□ 0.87
NUP54-205ENST00000507257 C8orf76Q96K31 380 aa20.51■□□□□ 0.87
NUP54-205ENST00000507257 PSD3Q9NYI0 1048 aa20.51■□□□□ 0.87
NUP54-205ENST00000507257 HSPD1P10809 573 aaKnown RBP20.51■□□□□ 0.87
NUP54-205ENST00000507257 MAP3K9P80192 1104 aa20.51■□□□□ 0.87
NUP54-205ENST00000507257 GUCY1B3Q02153 619 aa20.51■□□□□ 0.87
NUP54-205ENST00000507257 JAKMIP3Q5VZ66 844 aa20.51■□□□□ 0.87
NUP54-205ENST00000507257 CC2D1AQ6P1N0 951 aaPredicted RBP20.51■□□□□ 0.87
NUP54-205ENST00000507257 URI1O94763 535 aaPredicted RBP20.5■□□□□ 0.87
NUP54-205ENST00000507257 TBC1D8O95759 1140 aa20.5■□□□□ 0.87
NUP54-205ENST00000507257 PFKFB1P16118 471 aa20.5■□□□□ 0.87
NUP54-205ENST00000507257 UBASH3AP57075 661 aa20.5■□□□□ 0.87
NUP54-205ENST00000507257 AIMP1Q12904 312 aaKnown RBP20.5■□□□□ 0.87
NUP54-205ENST00000507257 ANO1Q5XXA6 986 aa20.5■□□□□ 0.87
NUP54-205ENST00000507257 ELOA2Q8IYF1 753 aaPredicted RBP20.5■□□□□ 0.87
NUP54-205ENST00000507257 CARD6Q9BX69 1037 aa20.5■□□□□ 0.87
NUP54-205ENST00000507257 PAG1Q9NWQ8 432 aa20.5■□□□□ 0.87
NUP54-205ENST00000507257 HPSEQ9Y251 543 aa20.5■□□□□ 0.87
NUP54-205ENST00000507257 SETD1BQ9UPS6 1966 aaKnown RBP20.5■□□□□ 0.87
NUP54-205ENST00000507257 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.49■□□□□ 0.87
NUP54-205ENST00000507257 ZBTB22O15209 634 aa20.49■□□□□ 0.87
NUP54-205ENST00000507257 FANCGO15287 622 aa20.49■□□□□ 0.87
NUP54-205ENST00000507257 LMOD1P29536 600 aaPredicted RBP20.49■□□□□ 0.87
NUP54-205ENST00000507257 SLC39A14Q15043 492 aa20.49■□□□□ 0.87
NUP54-205ENST00000507257 SYNE3Q6ZMZ3 975 aa20.49■□□□□ 0.87
NUP54-205ENST00000507257 RSRC2Q7L4I2 434 aaKnown RBP20.49■□□□□ 0.87
NUP54-205ENST00000507257 TMEM139Q8IV31 216 aa20.49■□□□□ 0.87
NUP54-205ENST00000507257 RABGGTAQ92696 567 aa20.49■□□□□ 0.87
NUP54-205ENST00000507257 WDR19Q8NEZ3 1342 aa20.49■□□□□ 0.87
NUP54-205ENST00000507257 VWA3AA6NCI4 1184 aa20.49■□□□□ 0.87
NUP54-205ENST00000507257 PPP6R2O75170 966 aa20.49■□□□□ 0.87
NUP54-205ENST00000507257 CHGBP05060 677 aa20.49■□□□□ 0.87
NUP54-205ENST00000507257 FBXW7Q969H0 707 aa20.49■□□□□ 0.87
NUP54-205ENST00000507257 PHF8Q9UPP1 1060 aa20.49■□□□□ 0.87
NUP54-205ENST00000507257 SCN11AQ9UI33 1791 aa20.48■□□□□ 0.87
NUP54-205ENST00000507257 MSL3Q8N5Y2 521 aaKnown RBP20.48■□□□□ 0.87
NUP54-205ENST00000507257 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.48■□□□□ 0.87
NUP54-205ENST00000507257 MYD88Q99836 296 aa20.48■□□□□ 0.87
NUP54-205ENST00000507257 MRFAP1Q9Y605 127 aa20.48■□□□□ 0.87
NUP54-205ENST00000507257 TOP1P11387 765 aaKnown RBP20.47■□□□□ 0.87
NUP54-205ENST00000507257 TBX2Q13207 712 aaPredicted RBP20.47■□□□□ 0.87
NUP54-205ENST00000507257 XAGE3Q8WTP9 111 aa20.47■□□□□ 0.87
NUP54-205ENST00000507257 PPP2R2CQ9Y2T4 447 aa20.47■□□□□ 0.87
NUP54-205ENST00000507257 ARFGEF2Q9Y6D5 1785 aa20.47■□□□□ 0.87
NUP54-205ENST00000507257 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
NUP54-205ENST00000507257 C4BP0C0L5 1744 aa20.47■□□□□ 0.87
NUP54-205ENST00000507257 STX10O60499 249 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms