RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ARHGAP27Q6ZUM4 889 aa17.31■□□□□ 0.36
RNF4-208ENST00000507247 HAUS7Q99871 368 aa17.31■□□□□ 0.36
RNF4-208ENST00000507247 COA1Q9GZY4 146 aa17.31■□□□□ 0.36
RNF4-208ENST00000507247 DBNDD1Q9H9R9 158 aa17.31■□□□□ 0.36
RNF4-208ENST00000507247 SNRKQ9NRH2 765 aa17.31■□□□□ 0.36
RNF4-208ENST00000507247 HMG20BQ9P0W2 317 aa17.31■□□□□ 0.36
RNF4-208ENST00000507247 MAP4K4O95819 1239 aaPredicted RBP17.3■□□□□ 0.36
RNF4-208ENST00000507247 EDC3Q96F86 508 aaKnown RBP17.3■□□□□ 0.36
RNF4-208ENST00000507247 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
RNF4-208ENST00000507247 MYH7P12883 1935 aa17.29■□□□□ 0.36
RNF4-208ENST00000507247 ZBTB22O15209 634 aa17.29■□□□□ 0.36
RNF4-208ENST00000507247 ECE2O60344 883 aa17.29■□□□□ 0.36
RNF4-208ENST00000507247 ZAP70P43403 619 aa17.29■□□□□ 0.36
RNF4-208ENST00000507247 LARGE2Q8N3Y3 721 aa17.29■□□□□ 0.36
RNF4-208ENST00000507247 SPATA5Q8NB90 893 aa17.29■□□□□ 0.36
RNF4-208ENST00000507247 DNAJC2Q99543 621 aaKnown RBP17.29■□□□□ 0.36
RNF4-208ENST00000507247 VPS33BQ9H267 617 aa17.29■□□□□ 0.36
RNF4-208ENST00000507247 YDJCA8MPS7 323 aa17.28■□□□□ 0.36
RNF4-208ENST00000507247 SEMA3EO15041 775 aa17.28■□□□□ 0.36
RNF4-208ENST00000507247 ANTXR1Q9H6X2 564 aa17.28■□□□□ 0.36
RNF4-208ENST00000507247 DENND2AQ9ULE3 1009 aa17.28■□□□□ 0.36
RNF4-208ENST00000507247 TIAM2Q8IVF5 1701 aa17.27■□□□□ 0.36
RNF4-208ENST00000507247 G3V3G9 751 aa17.27■□□□□ 0.36
RNF4-208ENST00000507247 CYP2E1P05181 493 aaPredicted RBP17.27■□□□□ 0.36
RNF4-208ENST00000507247 CHAF1AQ13111 956 aaPredicted RBP17.27■□□□□ 0.36
RNF4-208ENST00000507247 BMP2KLQ5H9B9 411 aa17.27■□□□□ 0.36
RNF4-208ENST00000507247 DCAF8Q5TAQ9 597 aa17.27■□□□□ 0.36
RNF4-208ENST00000507247 KCNQ5Q9NR82 932 aa17.27■□□□□ 0.36
RNF4-208ENST00000507247 JAG2Q9Y219 1238 aa17.27■□□□□ 0.36
RNF4-208ENST00000507247 PDS5AQ29RF7 1337 aaKnown RBP17.26■□□□□ 0.35
RNF4-208ENST00000507247 GOLIM4O00461 696 aa17.26■□□□□ 0.35
RNF4-208ENST00000507247 FRAT2O75474 233 aaPredicted RBP17.26■□□□□ 0.35
RNF4-208ENST00000507247 SDSP20132 328 aa17.26■□□□□ 0.35
RNF4-208ENST00000507247 PODNQ7Z5L7 613 aa17.26■□□□□ 0.35
RNF4-208ENST00000507247 PAG1Q9NWQ8 432 aa17.26■□□□□ 0.35
RNF4-208ENST00000507247 TRIM6-TRIM34B2RNG4 842 aa17.25■□□□□ 0.35
RNF4-208ENST00000507247 TBC1D9Q6ZT07 1266 aa17.25■□□□□ 0.35
RNF4-208ENST00000507247 NIM1KQ8IY84 436 aa17.25■□□□□ 0.35
RNF4-208ENST00000507247 PIH1D3Q9NQM4 214 aaKnown RBP17.25■□□□□ 0.35
RNF4-208ENST00000507247 MAST2Q6P0Q8 1798 aa17.25■□□□□ 0.35
RNF4-208ENST00000507247 FAM205AQ6ZU69 1335 aa17.24■□□□□ 0.35
RNF4-208ENST00000507247 GRIN3BO60391 1043 aa17.24■□□□□ 0.35
RNF4-208ENST00000507247 GTF2IP78347 998 aa17.24■□□□□ 0.35
RNF4-208ENST00000507247 CNTROBQ8N137 903 aa17.24■□□□□ 0.35
RNF4-208ENST00000507247 RILPL2Q969X0 211 aa17.24■□□□□ 0.35
RNF4-208ENST00000507247 EVI5LQ96CN4 794 aa17.24■□□□□ 0.35
RNF4-208ENST00000507247 LMNB1P20700 586 aa17.23■□□□□ 0.35
RNF4-208ENST00000507247 KBTBD3Q8NAB2 608 aa17.23■□□□□ 0.35
RNF4-208ENST00000507247 FBXW7Q969H0 707 aa17.23■□□□□ 0.35
RNF4-208ENST00000507247 ZNRF3Q9ULT6 936 aa17.23■□□□□ 0.35
RNF4-208ENST00000507247 SALL1Q9NSC2 1324 aa17.22■□□□□ 0.35
RNF4-208ENST00000507247 GRIK5Q16478 980 aa17.22■□□□□ 0.35
RNF4-208ENST00000507247 TTLL5Q6EMB2 1281 aa17.22■□□□□ 0.35
RNF4-208ENST00000507247 WDR66Q8TBY9 1149 aa17.22■□□□□ 0.35
RNF4-208ENST00000507247 JDP2Q8WYK2 163 aa17.22■□□□□ 0.35
RNF4-208ENST00000507247 MXD3Q9BW11 206 aa17.22■□□□□ 0.35
RNF4-208ENST00000507247 USP17L3A6NCW0 530 aa17.21■□□□□ 0.35
RNF4-208ENST00000507247 USP17L4A6NCW7 530 aa17.21■□□□□ 0.35
RNF4-208ENST00000507247 TTF1Q15361 905 aaPredicted RBP17.21■□□□□ 0.35
RNF4-208ENST00000507247 MFSD14BQ5SR56 506 aa17.21■□□□□ 0.35
RNF4-208ENST00000507247 DACT2Q5SW24 774 aa17.21■□□□□ 0.35
RNF4-208ENST00000507247 STRIP1Q5VSL9 837 aa17.21■□□□□ 0.35
RNF4-208ENST00000507247 USP17L1Q7RTZ2 530 aa17.21■□□□□ 0.35
RNF4-208ENST00000507247 CERS5Q8N5B7 392 aa17.21■□□□□ 0.35
RNF4-208ENST00000507247 FSD1Q9BTV5 496 aa17.21■□□□□ 0.35
RNF4-208ENST00000507247 ABCF2Q9UG63 623 aa17.21■□□□□ 0.35
RNF4-208ENST00000507247 MYH2Q9UKX2 1941 aa17.2■□□□□ 0.34
RNF4-208ENST00000507247 FZD9O00144 591 aa17.2■□□□□ 0.34
RNF4-208ENST00000507247 RAD17O75943 681 aa17.2■□□□□ 0.34
RNF4-208ENST00000507247 CHGBP05060 677 aa17.2■□□□□ 0.34
RNF4-208ENST00000507247 PRDX5P30044 214 aa17.2■□□□□ 0.34
RNF4-208ENST00000507247 CXCL9Q07325 125 aa17.2■□□□□ 0.34
RNF4-208ENST00000507247 RNF181Q9P0P0 153 aa17.2■□□□□ 0.34
RNF4-208ENST00000507247 ADAMTSL1Q8N6G6 1762 aa17.2■□□□□ 0.34
RNF4-208ENST00000507247 RFX7Q2KHR2 1363 aa17.19■□□□□ 0.34
RNF4-208ENST00000507247 PSMD14O00487 310 aa17.19■□□□□ 0.34
RNF4-208ENST00000507247 IDH1O75874 414 aaKnown RBP17.19■□□□□ 0.34
RNF4-208ENST00000507247 SLFNL1Q499Z3 407 aa17.19■□□□□ 0.34
RNF4-208ENST00000507247 C9orf131Q5VYM1 1079 aa17.19■□□□□ 0.34
RNF4-208ENST00000507247 TBC1D22AQ8WUA7 517 aa17.19■□□□□ 0.34
RNF4-208ENST00000507247 ZNF541Q9H0D2 1346 aa17.19■□□□□ 0.34
RNF4-208ENST00000507247 VIL1P09327 827 aaKnown RBP17.18■□□□□ 0.34
RNF4-208ENST00000507247 FKBP1AP62942 108 aaKnown RBP17.18■□□□□ 0.34
RNF4-208ENST00000507247 CIAPIN1Q6FI81 312 aa17.18■□□□□ 0.34
RNF4-208ENST00000507247 ERICH6Q7L0X2 663 aa17.18■□□□□ 0.34
RNF4-208ENST00000507247 ZGPATQ8N5A5 531 aaKnown RBP17.18■□□□□ 0.34
RNF4-208ENST00000507247 ZNF384Q8TF68 577 aa17.18■□□□□ 0.34
RNF4-208ENST00000507247 LRP2BPQ9P2M1 347 aa17.18■□□□□ 0.34
RNF4-208ENST00000507247 RAI14Q9P0K7 980 aa17.17■□□□□ 0.34
RNF4-208ENST00000507247 CDC45O75419 566 aa17.16■□□□□ 0.34
RNF4-208ENST00000507247 LDHBP07195 334 aaKnown RBP17.16■□□□□ 0.34
RNF4-208ENST00000507247 PDE6AP16499 860 aa17.16■□□□□ 0.34
RNF4-208ENST00000507247 CHMLP26374 656 aa17.16■□□□□ 0.34
RNF4-208ENST00000507247 ADD2P35612 726 aa17.16■□□□□ 0.34
RNF4-208ENST00000507247 EIF6P56537 245 aaKnown RBP17.16■□□□□ 0.34
RNF4-208ENST00000507247 MECOMQ03112 1051 aa17.16■□□□□ 0.34
RNF4-208ENST00000507247 MAP3K12Q12852 859 aa17.16■□□□□ 0.34
RNF4-208ENST00000507247 SPTY2D1Q68D10 685 aaPredicted RBP17.16■□□□□ 0.34
RNF4-208ENST00000507247 RSBN1LQ6PCB5 846 aaPredicted RBP17.16■□□□□ 0.34
RNF4-208ENST00000507247 NSUN4Q96CB9 384 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms