RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 DACT2Q5SW24 774 aa9.54□□□□□ -0.88
VCAN-207ENST00000507162 LHX8Q68G74 356 aa9.54□□□□□ -0.88
VCAN-207ENST00000507162 KIAA0825Q8IV33 1275 aa9.54□□□□□ -0.88
VCAN-207ENST00000507162 ANKRD13AQ8IZ07 590 aa9.54□□□□□ -0.88
VCAN-207ENST00000507162 C7orf61Q8IZ16 206 aa9.54□□□□□ -0.88
VCAN-207ENST00000507162 TDHQ8IZJ6 230 aa9.54□□□□□ -0.88
VCAN-207ENST00000507162 FAM43AQ8N2R8 423 aa9.54□□□□□ -0.88
VCAN-207ENST00000507162 PNISRQ8TF01 805 aaKnown RBP9.54□□□□□ -0.88
VCAN-207ENST00000507162 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
VCAN-207ENST00000507162 SEC31BQ9NQW1 1179 aa9.54□□□□□ -0.88
VCAN-207ENST00000507162 SPTBN5Q9NRC6 3674 aaKnown RBP9.53□□□□□ -0.88
VCAN-207ENST00000507162 UNCXA6NJT0 531 aa9.53□□□□□ -0.88
VCAN-207ENST00000507162 HTATSF1O43719 755 aaKnown RBP9.53□□□□□ -0.88
VCAN-207ENST00000507162 SGPL1O95470 568 aa9.53□□□□□ -0.88
VCAN-207ENST00000507162 GTF2A2P52657 109 aa9.53□□□□□ -0.88
VCAN-207ENST00000507162 NBPF12Q5TAG4 269 aaPredicted RBP9.53□□□□□ -0.88
VCAN-207ENST00000507162 XAGE3Q8WTP9 111 aa9.53□□□□□ -0.88
VCAN-207ENST00000507162 SYMPKQ92797 1274 aaKnown RBP9.53□□□□□ -0.88
VCAN-207ENST00000507162 GUCD1Q96NT3 240 aa9.53□□□□□ -0.88
VCAN-207ENST00000507162 UBE2OQ9C0C9 1292 aaKnown RBP9.53□□□□□ -0.88
VCAN-207ENST00000507162 UNC93B1Q9H1C4 597 aa9.53□□□□□ -0.88
VCAN-207ENST00000507162 SRRDQ9UH36 339 aa9.53□□□□□ -0.88
VCAN-207ENST00000507162 LAMA2P24043 3122 aaKnown RBP9.52□□□□□ -0.89
VCAN-207ENST00000507162 TMEM265A0A087WTH1 108 aa9.52□□□□□ -0.89
VCAN-207ENST00000507162 PITPNM1O00562 1244 aa9.52□□□□□ -0.89
VCAN-207ENST00000507162 TLR2O60603 784 aa9.52□□□□□ -0.89
VCAN-207ENST00000507162 ATP2B4P23634 1241 aa9.52□□□□□ -0.89
VCAN-207ENST00000507162 MAGEA10P43363 369 aaPredicted RBP9.52□□□□□ -0.89
VCAN-207ENST00000507162 PDIA6Q15084 440 aa9.52□□□□□ -0.89
VCAN-207ENST00000507162 DLGAP5Q15398 846 aa9.52□□□□□ -0.89
VCAN-207ENST00000507162 TTLL5Q6EMB2 1281 aa9.52□□□□□ -0.89
VCAN-207ENST00000507162 PAWRQ96IZ0 340 aaKnown RBP9.52□□□□□ -0.89
VCAN-207ENST00000507162 VEZTQ9HBM0 779 aa9.52□□□□□ -0.89
VCAN-207ENST00000507162 KDM3BQ7LBC6 1761 aa9.52□□□□□ -0.89
VCAN-207ENST00000507162 ANKRD36CQ5JPF3 1778 aa9.51□□□□□ -0.89
VCAN-207ENST00000507162 CLRN2A0PK11 232 aa9.51□□□□□ -0.89
VCAN-207ENST00000507162 ATP5J2-PTCD1G3V325 749 aa9.51□□□□□ -0.89
VCAN-207ENST00000507162 IRS4O14654 1257 aaPredicted RBP9.51□□□□□ -0.89
VCAN-207ENST00000507162 U2AF1L5P0DN76 240 aaPredicted RBP9.51□□□□□ -0.89
VCAN-207ENST00000507162 OSBPP22059 807 aa9.51□□□□□ -0.89
VCAN-207ENST00000507162 U2AF1Q01081 240 aaKnown RBP eCLIP9.51□□□□□ -0.89
VCAN-207ENST00000507162 STRIP1Q5VSL9 837 aa9.51□□□□□ -0.89
VCAN-207ENST00000507162 LRP10Q7Z4F1 713 aa9.51□□□□□ -0.89
VCAN-207ENST00000507162 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
VCAN-207ENST00000507162 CPA4Q9UI42 421 aa9.51□□□□□ -0.89
VCAN-207ENST00000507162 MYPNQ86TC9 1320 aa9.51□□□□□ -0.89
VCAN-207ENST00000507162 MYO3BQ8WXR4 1341 aa9.51□□□□□ -0.89
VCAN-207ENST00000507162 LAMB2P55268 1798 aa9.5□□□□□ -0.89
VCAN-207ENST00000507162 MYCNP04198 464 aaPredicted RBP9.5□□□□□ -0.89
VCAN-207ENST00000507162 CTGFP29279 349 aa9.5□□□□□ -0.89
VCAN-207ENST00000507162 MMP14P50281 582 aa9.5□□□□□ -0.89
VCAN-207ENST00000507162 NECAB2Q7Z6G3 386 aa9.5□□□□□ -0.89
VCAN-207ENST00000507162 MAFAQ8NHW3 353 aaPredicted RBP9.5□□□□□ -0.89
VCAN-207ENST00000507162 DEFB118Q96PH6 123 aa9.5□□□□□ -0.89
VCAN-207ENST00000507162 NUDCQ9Y266 331 aa9.5□□□□□ -0.89
VCAN-207ENST00000507162 BTBD19C9JJ37 291 aa9.49□□□□□ -0.89
VCAN-207ENST00000507162 POTEB2H3BUK9 544 aa9.49□□□□□ -0.89
VCAN-207ENST00000507162 TNFRSF10AO00220 468 aa9.49□□□□□ -0.89
VCAN-207ENST00000507162 MYO1BO43795 1136 aa9.49□□□□□ -0.89
VCAN-207ENST00000507162 HSPA5P11021 654 aaKnown RBP9.49□□□□□ -0.89
VCAN-207ENST00000507162 GTF2IP78347 998 aa9.49□□□□□ -0.89
VCAN-207ENST00000507162 DIS3LQ8TF46 1054 aaKnown RBP9.49□□□□□ -0.89
VCAN-207ENST00000507162 ZBED3Q96IU2 234 aaPredicted RBP9.49□□□□□ -0.89
VCAN-207ENST00000507162 PCDHAC2Q9Y5I4 1007 aa9.49□□□□□ -0.89
VCAN-207ENST00000507162 PPP2R3BQ9Y5P8 575 aa9.49□□□□□ -0.89
VCAN-207ENST00000507162 EYSQ5T1H1 3165 aa9.49□□□□□ -0.89
VCAN-207ENST00000507162 XDHP47989 1333 aa9.49□□□□□ -0.89
VCAN-207ENST00000507162 F8W031 263 aaPredicted RBP9.48□□□□□ -0.89
VCAN-207ENST00000507162 CETPP11597 493 aa9.48□□□□□ -0.89
VCAN-207ENST00000507162 MAP3K9P80192 1104 aa9.48□□□□□ -0.89
VCAN-207ENST00000507162 PRKCZQ05513 592 aa9.48□□□□□ -0.89
VCAN-207ENST00000507162 RASA3Q14644 834 aa9.48□□□□□ -0.89
VCAN-207ENST00000507162 FAM109BQ6ICB4 259 aaPredicted RBP9.48□□□□□ -0.89
VCAN-207ENST00000507162 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.48□□□□□ -0.89
VCAN-207ENST00000507162 ANKRD18AQ8IVF6 992 aa9.48□□□□□ -0.89
VCAN-207ENST00000507162 HELBQ8NG08 1087 aaPredicted RBP9.48□□□□□ -0.89
VCAN-207ENST00000507162 CFAP53Q96M91 514 aa9.48□□□□□ -0.89
VCAN-207ENST00000507162 CDX2Q99626 313 aaPredicted RBP9.48□□□□□ -0.89
VCAN-207ENST00000507162 COA1Q9GZY4 146 aa9.48□□□□□ -0.89
VCAN-207ENST00000507162 LRRC37AA6NMS7 1700 aa9.48□□□□□ -0.89
VCAN-207ENST00000507162 DDX60Q8IY21 1712 aaKnown RBP9.48□□□□□ -0.89
VCAN-207ENST00000507162 ADCY3O60266 1144 aa9.47□□□□□ -0.89
VCAN-207ENST00000507162 RBM5P52756 815 aaKnown RBP eCLIP9.47□□□□□ -0.89
VCAN-207ENST00000507162 EIF4G2P78344 907 aaKnown RBP eCLIP9.47□□□□□ -0.89
VCAN-207ENST00000507162 ZNF697Q5TEC3 545 aa9.47□□□□□ -0.89
VCAN-207ENST00000507162 C17orf99Q6UX52 265 aa9.47□□□□□ -0.89
VCAN-207ENST00000507162 SLAIN1Q8ND83 568 aa9.47□□□□□ -0.89
VCAN-207ENST00000507162 GABRQQ9UN88 632 aa9.47□□□□□ -0.89
VCAN-207ENST00000507162 CSADQ9Y600 493 aa9.47□□□□□ -0.89
VCAN-207ENST00000507162 NCOR1O75376 2440 aa9.47□□□□□ -0.89
VCAN-207ENST00000507162 SSC5DA1L4H1 1573 aa9.46□□□□□ -0.89
VCAN-207ENST00000507162 COL4A1P02462 1669 aa9.46□□□□□ -0.89
VCAN-207ENST00000507162 INHAP05111 366 aa9.46□□□□□ -0.9
VCAN-207ENST00000507162 ELNP15502 786 aa9.46□□□□□ -0.9
VCAN-207ENST00000507162 MAP3K12Q12852 859 aa9.46□□□□□ -0.9
VCAN-207ENST00000507162 VGLL4Q14135 290 aa9.46□□□□□ -0.9
VCAN-207ENST00000507162 CFAP100Q494V2 611 aa9.46□□□□□ -0.9
VCAN-207ENST00000507162 CCDC152Q4G0S7 254 aa9.46□□□□□ -0.9
VCAN-207ENST00000507162 TXNRD3Q86VQ6 643 aa9.46□□□□□ -0.9
VCAN-207ENST00000507162 JARID2Q92833 1246 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms