RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 NXPE4Q6UWF7 544 aa5.12□□□□□ -1.59
GYPB-207ENST00000506679 TMC4Q7Z404 712 aa5.12□□□□□ -1.59
GYPB-207ENST00000506679 FBXO11Q86XK2 927 aa5.12□□□□□ -1.59
GYPB-207ENST00000506679 MAP4K3Q8IVH8 894 aa5.12□□□□□ -1.59
GYPB-207ENST00000506679 WNT8BQ93098 351 aa5.12□□□□□ -1.59
GYPB-207ENST00000506679 SOX17Q9H6I2 414 aaPredicted RBP5.12□□□□□ -1.59
GYPB-207ENST00000506679 PODXL2Q9NZ53 605 aa5.12□□□□□ -1.59
GYPB-207ENST00000506679 PARP2Q9UGN5 583 aa5.12□□□□□ -1.59
GYPB-207ENST00000506679 SPG7Q9UQ90 795 aa5.12□□□□□ -1.59
GYPB-207ENST00000506679 LINC01387J3KSC0 135 aa5.11□□□□□ -1.59
GYPB-207ENST00000506679 DLL1O00548 723 aa5.11□□□□□ -1.59
GYPB-207ENST00000506679 B3GALT4O96024 378 aa5.11□□□□□ -1.59
GYPB-207ENST00000506679 SPATA31C1P0DKV0 1188 aa5.11□□□□□ -1.59
GYPB-207ENST00000506679 ESRRAP11474 423 aaPredicted RBP5.11□□□□□ -1.59
GYPB-207ENST00000506679 ZNF16P17020 682 aaPredicted RBP5.11□□□□□ -1.59
GYPB-207ENST00000506679 PIP4K2BP78356 416 aa5.11□□□□□ -1.59
GYPB-207ENST00000506679 RPS26P11Q5JNZ5 115 aaPredicted RBP5.11□□□□□ -1.59
GYPB-207ENST00000506679 ASAP3Q8TDY4 903 aa5.11□□□□□ -1.59
GYPB-207ENST00000506679 GIPC2Q8TF65 315 aa5.11□□□□□ -1.59
GYPB-207ENST00000506679 CLEC4MQ9H2X3 399 aaPredicted RBP5.11□□□□□ -1.59
GYPB-207ENST00000506679 AK5Q9Y6K8 562 aa5.11□□□□□ -1.59
GYPB-207ENST00000506679 FAM229AH3BQW9 127 aa5.1□□□□□ -1.59
GYPB-207ENST00000506679 SOX1O00570 391 aaPredicted RBP5.1□□□□□ -1.59
GYPB-207ENST00000506679 FSCN2O14926 492 aa5.1□□□□□ -1.59
GYPB-207ENST00000506679 ELNP15502 786 aa5.1□□□□□ -1.59
GYPB-207ENST00000506679 CABP4P57796 275 aa5.1□□□□□ -1.59
GYPB-207ENST00000506679 RAC1P63000 192 aa5.1□□□□□ -1.59
GYPB-207ENST00000506679 RASSF7Q02833 373 aa5.1□□□□□ -1.59
GYPB-207ENST00000506679 PCDH1Q08174 1060 aa5.1□□□□□ -1.59
GYPB-207ENST00000506679 ZNF423Q2M1K9 1284 aa5.1□□□□□ -1.59
GYPB-207ENST00000506679 PRRT3Q5FWE3 981 aa5.1□□□□□ -1.59
GYPB-207ENST00000506679 GALNT11Q8NCW6 608 aa5.1□□□□□ -1.59
GYPB-207ENST00000506679 DCAF5Q96JK2 942 aa5.1□□□□□ -1.59
GYPB-207ENST00000506679 NRSN2Q9GZP1 204 aa5.1□□□□□ -1.59
GYPB-207ENST00000506679 OSGEPQ9NPF4 335 aa5.1□□□□□ -1.59
GYPB-207ENST00000506679 FAM8A1Q9UBU6 413 aa5.1□□□□□ -1.59
GYPB-207ENST00000506679 KRBA1A5PL33 1030 aa5.09□□□□□ -1.59
GYPB-207ENST00000506679 SELPP16109 830 aa5.09□□□□□ -1.59
GYPB-207ENST00000506679 EIF4BP23588 611 aaKnown RBP5.09□□□□□ -1.59
GYPB-207ENST00000506679 GSTT1P30711 240 aa5.09□□□□□ -1.59
GYPB-207ENST00000506679 FCGRTP55899 365 aa5.09□□□□□ -1.59
GYPB-207ENST00000506679 FAAP100Q0VG06 881 aa5.09□□□□□ -1.59
GYPB-207ENST00000506679 TRIM28Q13263 835 aaKnown RBP5.09□□□□□ -1.59
GYPB-207ENST00000506679 IKBKEQ14164 716 aa5.09□□□□□ -1.59
GYPB-207ENST00000506679 MRPL58Q14197 206 aaKnown RBP5.09□□□□□ -1.59
GYPB-207ENST00000506679 FOXD4L6Q3SYB3 417 aaPredicted RBP5.09□□□□□ -1.59
GYPB-207ENST00000506679 ZNF326Q5BKZ1 582 aaKnown RBP5.09□□□□□ -1.59
GYPB-207ENST00000506679 HGSNATQ68CP4 663 aa5.09□□□□□ -1.59
GYPB-207ENST00000506679 TXNDC11Q6PKC3 985 aa5.09□□□□□ -1.59
GYPB-207ENST00000506679 FOXD4L3Q6VB84 417 aaPredicted RBP5.09□□□□□ -1.59
GYPB-207ENST00000506679 KLHL23Q8NBE8 558 aa5.09□□□□□ -1.59
GYPB-207ENST00000506679 DCAF11Q8TEB1 546 aa5.09□□□□□ -1.59
GYPB-207ENST00000506679 ZFYVE1Q9HBF4 777 aa5.09□□□□□ -1.59
GYPB-207ENST00000506679 SEC31BQ9NQW1 1179 aa5.09□□□□□ -1.59
GYPB-207ENST00000506679 PPM1HQ9ULR3 514 aa5.09□□□□□ -1.59
GYPB-207ENST00000506679 FAM177BA6PVY3 158 aa5.08□□□□□ -1.6
GYPB-207ENST00000506679 ADAM11O75078 769 aa5.08□□□□□ -1.6
GYPB-207ENST00000506679 ITGB2P05107 769 aa5.08□□□□□ -1.6
GYPB-207ENST00000506679 CTSHP09668 335 aa5.08□□□□□ -1.6
GYPB-207ENST00000506679 USP17L7P0C7H9 530 aa5.08□□□□□ -1.6
GYPB-207ENST00000506679 C19orf57Q0VDD7 668 aa5.08□□□□□ -1.6
GYPB-207ENST00000506679 FAM117BQ6P1L5 589 aa5.08□□□□□ -1.6
GYPB-207ENST00000506679 IGF2-ASQ6U949 168 aa5.08□□□□□ -1.6
GYPB-207ENST00000506679 DTHD1Q6ZMT9 781 aa5.08□□□□□ -1.6
GYPB-207ENST00000506679 KLHDC7BQ96G42 594 aa5.08□□□□□ -1.6
GYPB-207ENST00000506679 FAM161BQ96MY7 647 aa5.08□□□□□ -1.6
GYPB-207ENST00000506679 CARD10Q9BWT7 1032 aa5.08□□□□□ -1.6
GYPB-207ENST00000506679 PPP4R2Q9NY27 417 aa5.08□□□□□ -1.6
GYPB-207ENST00000506679 CD68P34810 354 aaPredicted RBP5.07□□□□□ -1.6
GYPB-207ENST00000506679 XPCQ01831 940 aaPredicted RBP5.07□□□□□ -1.6
GYPB-207ENST00000506679 PSMD2Q13200 908 aa5.07□□□□□ -1.6
GYPB-207ENST00000506679 SUZ12Q15022 739 aaKnown RBP5.07□□□□□ -1.6
GYPB-207ENST00000506679 GRIK4Q16099 956 aa5.07□□□□□ -1.6
GYPB-207ENST00000506679 LDLRAD1Q5T700 205 aa5.07□□□□□ -1.6
GYPB-207ENST00000506679 FOXD4L4Q8WXT5 416 aaPredicted RBP5.07□□□□□ -1.6
GYPB-207ENST00000506679 LENG1Q96BZ8 264 aaPredicted RBP5.07□□□□□ -1.6
GYPB-207ENST00000506679 TRIM56Q9BRZ2 755 aaKnown RBP5.07□□□□□ -1.6
GYPB-207ENST00000506679 KCNK4Q9NYG8 393 aa5.07□□□□□ -1.6
GYPB-207ENST00000506679 SORBS3O60504 671 aa5.06□□□□□ -1.6
GYPB-207ENST00000506679 EIF4EBP3O60516 100 aaPredicted RBP5.06□□□□□ -1.6
GYPB-207ENST00000506679 VAMP1P23763 118 aa5.06□□□□□ -1.6
GYPB-207ENST00000506679 CDC25BP30305 580 aa5.06□□□□□ -1.6
GYPB-207ENST00000506679 CHRNA4P43681 627 aa5.06□□□□□ -1.6
GYPB-207ENST00000506679 SHISA2Q6UWI4 295 aa5.06□□□□□ -1.6
GYPB-207ENST00000506679 CRELD1Q96HD1 420 aa5.06□□□□□ -1.6
GYPB-207ENST00000506679 NECAB3Q96P71 396 aaPredicted RBP5.06□□□□□ -1.6
GYPB-207ENST00000506679 NACC1Q96RE7 527 aa5.06□□□□□ -1.6
GYPB-207ENST00000506679 C9orf172C9J069 976 aa5.05□□□□□ -1.6
GYPB-207ENST00000506679 ENC1O14682 589 aa5.05□□□□□ -1.6
GYPB-207ENST00000506679 DDX3YO15523 660 aaKnown RBP5.05□□□□□ -1.6
GYPB-207ENST00000506679 WISP1O95388 367 aa5.05□□□□□ -1.6
GYPB-207ENST00000506679 GDF11O95390 407 aa5.05□□□□□ -1.6
GYPB-207ENST00000506679 ARL4DP49703 201 aa5.05□□□□□ -1.6
GYPB-207ENST00000506679 ST13P50502 369 aaKnown RBP5.05□□□□□ -1.6
GYPB-207ENST00000506679 ADGRE1Q14246 886 aa5.05□□□□□ -1.6
GYPB-207ENST00000506679 Q6ZS46 218 aa5.05□□□□□ -1.6
GYPB-207ENST00000506679 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.05□□□□□ -1.6
GYPB-207ENST00000506679 CD163Q86VB7 1156 aa5.05□□□□□ -1.6
GYPB-207ENST00000506679 TMEM130Q8N3G9 435 aa5.05□□□□□ -1.6
GYPB-207ENST00000506679 SLC7A3Q8WY07 619 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms