RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 NOP58Q9Y2X3 529 aaKnown RBP22.6■■□□□ 1.21
PDLIM7-216ENST00000506537 COL1A1P02452 1464 aaPredicted RBP22.6■■□□□ 1.21
PDLIM7-216ENST00000506537 SURF6O75683 361 aaKnown RBP22.59■■□□□ 1.21
PDLIM7-216ENST00000506537 USP17L8P0C7I0 530 aa22.59■■□□□ 1.21
PDLIM7-216ENST00000506537 VPS37DQ86XT2 251 aa22.59■■□□□ 1.21
PDLIM7-216ENST00000506537 CHMP4BQ9H444 224 aaKnown RBP22.59■■□□□ 1.21
PDLIM7-216ENST00000506537 TIMM10P62072 90 aa22.58■■□□□ 1.21
PDLIM7-216ENST00000506537 KIF4BQ2VIQ3 1234 aa22.58■■□□□ 1.21
PDLIM7-216ENST00000506537 MYH13Q9UKX3 1938 aa22.58■■□□□ 1.21
PDLIM7-216ENST00000506537 A0A1B0GUL7 405 aa22.57■■□□□ 1.2
PDLIM7-216ENST00000506537 ITGBL1O95965 494 aaPredicted RBP22.57■■□□□ 1.2
PDLIM7-216ENST00000506537 FKBP1AP62942 108 aaKnown RBP22.57■■□□□ 1.2
PDLIM7-216ENST00000506537 RBM26Q5T8P6 1007 aaKnown RBP22.57■■□□□ 1.2
PDLIM7-216ENST00000506537 KIAA0825Q8IV33 1275 aa22.57■■□□□ 1.2
PDLIM7-216ENST00000506537 RPAP2Q8IXW5 612 aaPredicted RBP22.57■■□□□ 1.2
PDLIM7-216ENST00000506537 PGAP2Q9UHJ9 254 aa22.57■■□□□ 1.2
PDLIM7-216ENST00000506537 PHKA1P46020 1223 aa22.56■■□□□ 1.2
PDLIM7-216ENST00000506537 MYOZ2Q9NPC6 264 aa22.56■■□□□ 1.2
PDLIM7-216ENST00000506537 EXOC6BQ9Y2D4 811 aa22.56■■□□□ 1.2
PDLIM7-216ENST00000506537 AKAP2Q9Y2D5 859 aa22.56■■□□□ 1.2
PDLIM7-216ENST00000506537 ASTN2O75129 1339 aaPredicted RBP22.56■■□□□ 1.2
PDLIM7-216ENST00000506537 PASKQ96RG2 1323 aa22.56■■□□□ 1.2
PDLIM7-216ENST00000506537 CHAF1AQ13111 956 aaPredicted RBP22.55■■□□□ 1.2
PDLIM7-216ENST00000506537 OS9Q13438 667 aaPredicted RBP22.55■■□□□ 1.2
PDLIM7-216ENST00000506537 MFSD14BQ5SR56 506 aa22.55■■□□□ 1.2
PDLIM7-216ENST00000506537 CNTROBQ8N137 903 aa22.55■■□□□ 1.2
PDLIM7-216ENST00000506537 XAGE2Q96GT9 111 aa22.55■■□□□ 1.2
PDLIM7-216ENST00000506537 GRIK5Q16478 980 aa22.54■■□□□ 1.2
PDLIM7-216ENST00000506537 ZC3H15Q8WU90 426 aaKnown RBP22.54■■□□□ 1.2
PDLIM7-216ENST00000506537 CRBNQ96SW2 442 aa22.54■■□□□ 1.2
PDLIM7-216ENST00000506537 CCDC102BQ68D86 513 aa22.53■■□□□ 1.2
PDLIM7-216ENST00000506537 GPR108Q9NPR9 543 aa22.53■■□□□ 1.2
PDLIM7-216ENST00000506537 F8W031 263 aaPredicted RBP22.52■■□□□ 1.2
PDLIM7-216ENST00000506537 FRAT2O75474 233 aaPredicted RBP22.52■■□□□ 1.2
PDLIM7-216ENST00000506537 FMR1Q06787 632 aaKnown RBP eCLIP22.52■■□□□ 1.2
PDLIM7-216ENST00000506537 TNNI3KQ59H18 835 aa22.52■■□□□ 1.2
PDLIM7-216ENST00000506537 OGFOD1Q8N543 542 aa22.52■■□□□ 1.2
PDLIM7-216ENST00000506537 NEUROD6Q96NK8 337 aa22.52■■□□□ 1.2
PDLIM7-216ENST00000506537 FPGT-TNNI3KV9GXZ4 949 aa22.52■■□□□ 1.2
PDLIM7-216ENST00000506537 TRAF5O00463 557 aa22.51■■□□□ 1.19
PDLIM7-216ENST00000506537 HMMRO75330 724 aa22.51■■□□□ 1.19
PDLIM7-216ENST00000506537 APLP1P51693 650 aa22.51■■□□□ 1.19
PDLIM7-216ENST00000506537 SCARF1Q14162 830 aa22.51■■□□□ 1.19
PDLIM7-216ENST00000506537 ZBED3Q96IU2 234 aaPredicted RBP22.51■■□□□ 1.19
PDLIM7-216ENST00000506537 GLIS2Q9BZE0 524 aaPredicted RBP22.51■■□□□ 1.19
PDLIM7-216ENST00000506537 GGA3Q9NZ52 723 aa22.51■■□□□ 1.19
PDLIM7-216ENST00000506537 HTRA3P83110 453 aa22.5■■□□□ 1.19
PDLIM7-216ENST00000506537 NBPF9Q3BBW0 867 aa22.5■■□□□ 1.19
PDLIM7-216ENST00000506537 GNL3LQ9NVN8 582 aaKnown RBP22.5■■□□□ 1.19
PDLIM7-216ENST00000506537 HDAC9Q9UKV0 1011 aa22.5■■□□□ 1.19
PDLIM7-216ENST00000506537 PCDHAC2Q9Y5I4 1007 aa22.5■■□□□ 1.19
PDLIM7-216ENST00000506537 POLR2AP24928 1970 aaKnown RBP22.5■■□□□ 1.19
PDLIM7-216ENST00000506537 WNT10BO00744 389 aa22.49■■□□□ 1.19
PDLIM7-216ENST00000506537 ZBTB22O15209 634 aa22.49■■□□□ 1.19
PDLIM7-216ENST00000506537 MMP14P50281 582 aa22.49■■□□□ 1.19
PDLIM7-216ENST00000506537 RASGRF1Q13972 1273 aa22.49■■□□□ 1.19
PDLIM7-216ENST00000506537 TBC1D22AQ8WUA7 517 aa22.49■■□□□ 1.19
PDLIM7-216ENST00000506537 SEMA3EO15041 775 aa22.48■■□□□ 1.19
PDLIM7-216ENST00000506537 ANGEL2Q5VTE6 544 aaKnown RBP22.48■■□□□ 1.19
PDLIM7-216ENST00000506537 DLK2Q6UY11 383 aa22.48■■□□□ 1.19
PDLIM7-216ENST00000506537 ERC1Q8IUD2 1116 aa22.48■■□□□ 1.19
PDLIM7-216ENST00000506537 DBNDD2Q9BQY9 259 aa22.48■■□□□ 1.19
PDLIM7-216ENST00000506537 TLR7Q9NYK1 1049 aaKnown RBP22.48■■□□□ 1.19
PDLIM7-216ENST00000506537 TTF2Q9UNY4 1162 aaKnown RBP22.48■■□□□ 1.19
PDLIM7-216ENST00000506537 PCDHB15Q9Y5E8 787 aa22.48■■□□□ 1.19
PDLIM7-216ENST00000506537 AOX1Q06278 1338 aa22.48■■□□□ 1.19
PDLIM7-216ENST00000506537 MTMR14Q8NCE2 650 aa22.47■■□□□ 1.19
PDLIM7-216ENST00000506537 RHPN1Q8TCX5 695 aa22.47■■□□□ 1.19
PDLIM7-216ENST00000506537 EAF2Q96CJ1 260 aaPredicted RBP22.47■■□□□ 1.19
PDLIM7-216ENST00000506537 DBNLQ9UJU6 430 aaKnown RBP22.47■■□□□ 1.19
PDLIM7-216ENST00000506537 DENND2AQ9ULE3 1009 aa22.47■■□□□ 1.19
PDLIM7-216ENST00000506537 SUPT16HQ9Y5B9 1047 aaKnown RBP22.47■■□□□ 1.19
PDLIM7-216ENST00000506537 ECM29Q5VYK3 1845 aa22.47■■□□□ 1.19
PDLIM7-216ENST00000506537 TRPM7Q96QT4 1865 aa22.47■■□□□ 1.19
PDLIM7-216ENST00000506537 ADM5C9JUS6 153 aa22.46■■□□□ 1.19
PDLIM7-216ENST00000506537 ARID4AP29374 1257 aaPredicted RBP22.46■■□□□ 1.19
PDLIM7-216ENST00000506537 CFAP100Q494V2 611 aa22.46■■□□□ 1.19
PDLIM7-216ENST00000506537 HSP90AB4PQ58FF6 505 aa22.46■■□□□ 1.19
PDLIM7-216ENST00000506537 CDC37L1Q7L3B6 337 aa22.46■■□□□ 1.19
PDLIM7-216ENST00000506537 KRT26Q7Z3Y9 468 aa22.46■■□□□ 1.19
PDLIM7-216ENST00000506537 USP48Q86UV5 1035 aa22.46■■□□□ 1.19
PDLIM7-216ENST00000506537 WDR66Q8TBY9 1149 aa22.46■■□□□ 1.19
PDLIM7-216ENST00000506537 APBB1O00213 710 aa22.45■■□□□ 1.18
PDLIM7-216ENST00000506537 DLGAP5Q15398 846 aa22.45■■□□□ 1.18
PDLIM7-216ENST00000506537 GORABQ5T7V8 394 aa22.45■■□□□ 1.18
PDLIM7-216ENST00000506537 PI16Q6UXB8 463 aa22.45■■□□□ 1.18
PDLIM7-216ENST00000506537 DCPSQ96C86 337 aaKnown RBP22.45■■□□□ 1.18
PDLIM7-216ENST00000506537 CCDC8Q9H0W5 538 aaPredicted RBP22.45■■□□□ 1.18
PDLIM7-216ENST00000506537 IL1RAPL2Q9NP60 686 aa22.45■■□□□ 1.18
PDLIM7-216ENST00000506537 SCAF8Q9UPN6 1271 aaKnown RBP22.45■■□□□ 1.18
PDLIM7-216ENST00000506537 PDS5AQ29RF7 1337 aaKnown RBP22.45■■□□□ 1.18
PDLIM7-216ENST00000506537 PITPNM2Q9BZ72 1349 aa22.45■■□□□ 1.18
PDLIM7-216ENST00000506537 SALL1Q9NSC2 1324 aa22.45■■□□□ 1.18
PDLIM7-216ENST00000506537 SPDYE2BA6NHP3 402 aa22.44■■□□□ 1.18
PDLIM7-216ENST00000506537 SPDYE6P0CI01 402 aa22.44■■□□□ 1.18
PDLIM7-216ENST00000506537 HMG20BQ9P0W2 317 aa22.44■■□□□ 1.18
PDLIM7-216ENST00000506537 SERPINA10Q9UK55 444 aa22.44■■□□□ 1.18
PDLIM7-216ENST00000506537 AKAP11Q9UKA4 1901 aa22.43■■□□□ 1.18
PDLIM7-216ENST00000506537 PRDX5P30044 214 aa22.43■■□□□ 1.18
PDLIM7-216ENST00000506537 MCAMP43121 646 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms