RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 MAP3K11Q16584 847 aa9.51□□□□□ -0.89
HERC4-213ENST00000506515 C20orf204Q6ZNR8 217 aa9.51□□□□□ -0.89
HERC4-213ENST00000506515 VN1R5Q7Z5H4 357 aa9.51□□□□□ -0.89
HERC4-213ENST00000506515 ZNF417Q8TAU3 575 aa9.51□□□□□ -0.89
HERC4-213ENST00000506515 ZNF775Q96BV0 537 aaPredicted RBP9.51□□□□□ -0.89
HERC4-213ENST00000506515 ZNF587Q96SQ5 575 aaPredicted RBP9.51□□□□□ -0.89
HERC4-213ENST00000506515 TRIM56Q9BRZ2 755 aaKnown RBP9.51□□□□□ -0.89
HERC4-213ENST00000506515 CLEC4MQ9H2X3 399 aaPredicted RBP9.51□□□□□ -0.89
HERC4-213ENST00000506515 SEC31BQ9NQW1 1179 aa9.51□□□□□ -0.89
HERC4-213ENST00000506515 SOX13Q9UN79 622 aa9.51□□□□□ -0.89
HERC4-213ENST00000506515 PCDHGB7Q9Y5F8 929 aa9.51□□□□□ -0.89
HERC4-213ENST00000506515 SHISA8B8ZZ34 492 aa9.5□□□□□ -0.89
HERC4-213ENST00000506515 F6X3S4 739 aa9.5□□□□□ -0.89
HERC4-213ENST00000506515 LILRB5O75023 590 aa9.5□□□□□ -0.89
HERC4-213ENST00000506515 EPHA1P21709 976 aa9.5□□□□□ -0.89
HERC4-213ENST00000506515 PCDH1Q08174 1060 aa9.5□□□□□ -0.89
HERC4-213ENST00000506515 KANK3Q6NY19 840 aa9.5□□□□□ -0.89
HERC4-213ENST00000506515 LYPD4Q6UWN0 246 aa9.5□□□□□ -0.89
HERC4-213ENST00000506515 USP48Q86UV5 1035 aa9.5□□□□□ -0.89
HERC4-213ENST00000506515 IL22RA1Q8N6P7 574 aa9.5□□□□□ -0.89
HERC4-213ENST00000506515 BTBD6Q96KE9 485 aa9.5□□□□□ -0.89
HERC4-213ENST00000506515 NOC4LQ9BVI4 516 aaKnown RBP9.5□□□□□ -0.89
HERC4-213ENST00000506515 CEP44Q9C0F1 390 aa9.5□□□□□ -0.89
HERC4-213ENST00000506515 COPRSQ9NQ92 184 aa9.5□□□□□ -0.89
HERC4-213ENST00000506515 CELA2BP08218 269 aaPredicted RBP9.49□□□□□ -0.89
HERC4-213ENST00000506515 CELA3AP09093 270 aa9.49□□□□□ -0.89
HERC4-213ENST00000506515 AFF1P51825 1210 aaKnown RBP9.49□□□□□ -0.89
HERC4-213ENST00000506515 CABP4P57796 275 aa9.49□□□□□ -0.89
HERC4-213ENST00000506515 MAP3K10Q02779 954 aa9.49□□□□□ -0.89
HERC4-213ENST00000506515 GRIK5Q16478 980 aa9.49□□□□□ -0.89
HERC4-213ENST00000506515 RPS26P11Q5JNZ5 115 aaPredicted RBP9.49□□□□□ -0.89
HERC4-213ENST00000506515 SV2BQ7L1I2 683 aa9.49□□□□□ -0.89
HERC4-213ENST00000506515 CCSER2Q9H7U1 834 aa9.49□□□□□ -0.89
HERC4-213ENST00000506515 ZC3H6P61129 1189 aaKnown RBP9.48□□□□□ -0.89
HERC4-213ENST00000506515 IKBKEQ14164 716 aa9.48□□□□□ -0.89
HERC4-213ENST00000506515 ZNF423Q2M1K9 1284 aa9.48□□□□□ -0.89
HERC4-213ENST00000506515 TXNDC11Q6PKC3 985 aa9.48□□□□□ -0.89
HERC4-213ENST00000506515 ERMP1Q7Z2K6 904 aa9.48□□□□□ -0.89
HERC4-213ENST00000506515 ANKRD24Q8TF21 1146 aa9.48□□□□□ -0.89
HERC4-213ENST00000506515 WHAMMQ8TF30 809 aa9.48□□□□□ -0.89
HERC4-213ENST00000506515 NECAB3Q96P71 396 aaPredicted RBP9.48□□□□□ -0.89
HERC4-213ENST00000506515 TGIF2Q9GZN2 237 aa9.48□□□□□ -0.89
HERC4-213ENST00000506515 KBTBD4Q9NVX7 518 aa9.48□□□□□ -0.89
HERC4-213ENST00000506515 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.48□□□□□ -0.89
HERC4-213ENST00000506515 ENC1O14682 589 aa9.47□□□□□ -0.89
HERC4-213ENST00000506515 RACK1P63244 317 aaKnown RBP9.47□□□□□ -0.89
HERC4-213ENST00000506515 RELL1Q8IUW5 271 aa9.47□□□□□ -0.89
HERC4-213ENST00000506515 CACTIN-AS1Q8N1I8 211 aa9.47□□□□□ -0.89
HERC4-213ENST00000506515 ACBD3Q9H3P7 528 aa9.47□□□□□ -0.89
HERC4-213ENST00000506515 TMEM39AQ9NV64 488 aa9.47□□□□□ -0.89
HERC4-213ENST00000506515 DDX41Q9UJV9 622 aaKnown RBP9.47□□□□□ -0.89
HERC4-213ENST00000506515 MINDY4BA8MYZ0 360 aa9.46□□□□□ -0.9
HERC4-213ENST00000506515 LINC01387J3KSC0 135 aa9.46□□□□□ -0.9
HERC4-213ENST00000506515 PAGE1O75459 146 aa9.46□□□□□ -0.9
HERC4-213ENST00000506515 ESRRAP11474 423 aaPredicted RBP9.46□□□□□ -0.9
HERC4-213ENST00000506515 PPP2R3AQ06190 1150 aa9.46□□□□□ -0.9
HERC4-213ENST00000506515 ZNF654Q8IZM8 581 aa9.46□□□□□ -0.9
HERC4-213ENST00000506515 SLC7A3Q8WY07 619 aa9.46□□□□□ -0.9
HERC4-213ENST00000506515 PPME1Q9Y570 386 aa9.46□□□□□ -0.9
HERC4-213ENST00000506515 H3BRJ5 948 aa9.45□□□□□ -0.9
HERC4-213ENST00000506515 B3GALT4O96024 378 aa9.45□□□□□ -0.9
HERC4-213ENST00000506515 GBP2P32456 591 aaPredicted RBP9.45□□□□□ -0.9
HERC4-213ENST00000506515 BAG6P46379 1132 aa9.45□□□□□ -0.9
HERC4-213ENST00000506515 NAALADL2Q58DX5 795 aa9.45□□□□□ -0.9
HERC4-213ENST00000506515 TREML4Q6UXN2 200 aa9.45□□□□□ -0.9
HERC4-213ENST00000506515 WFDC8Q8IUA0 241 aa9.45□□□□□ -0.9
HERC4-213ENST00000506515 RSRP1Q9BUV0 290 aa9.45□□□□□ -0.9
HERC4-213ENST00000506515 SRA1Q9HD15 236 aaKnown RBP9.45□□□□□ -0.9
HERC4-213ENST00000506515 LRRC4BQ9NT99 713 aa9.45□□□□□ -0.9
HERC4-213ENST00000506515 SOX1O00570 391 aaPredicted RBP9.44□□□□□ -0.9
HERC4-213ENST00000506515 PWP1Q13610 501 aa9.44□□□□□ -0.9
HERC4-213ENST00000506515 HGSNATQ68CP4 663 aa9.44□□□□□ -0.9
HERC4-213ENST00000506515 MSL1Q68DK7 614 aa9.44□□□□□ -0.9
HERC4-213ENST00000506515 TTBK2Q6IQ55 1244 aa9.44□□□□□ -0.9
HERC4-213ENST00000506515 RRAGCQ9HB90 399 aa9.44□□□□□ -0.9
HERC4-213ENST00000506515 CAPN10Q9HC96 672 aa9.44□□□□□ -0.9
HERC4-213ENST00000506515 TLR6Q9Y2C9 796 aa9.44□□□□□ -0.9
HERC4-213ENST00000506515 RLBP1P12271 317 aa9.43□□□□□ -0.9
HERC4-213ENST00000506515 TNNI2P48788 182 aa9.43□□□□□ -0.9
HERC4-213ENST00000506515 LIG3P49916 1009 aa9.43□□□□□ -0.9
HERC4-213ENST00000506515 FAM117BQ6P1L5 589 aa9.43□□□□□ -0.9
HERC4-213ENST00000506515 SVOPQ8N4V2 548 aa9.43□□□□□ -0.9
HERC4-213ENST00000506515 NEDD1Q8NHV4 660 aa9.43□□□□□ -0.9
HERC4-213ENST00000506515 TMEM74Q96NL1 305 aa9.43□□□□□ -0.9
HERC4-213ENST00000506515 C8orf37Q96NL8 207 aa9.43□□□□□ -0.9
HERC4-213ENST00000506515 GSTM4Q03013 218 aa9.42□□□□□ -0.9
HERC4-213ENST00000506515 PCNX4Q63HM2 1172 aa9.42□□□□□ -0.9
HERC4-213ENST00000506515 ZNF385CQ66K41 422 aaPredicted RBP9.42□□□□□ -0.9
HERC4-213ENST00000506515 DMRTC2Q8IXT2 367 aaPredicted RBP9.42□□□□□ -0.9
HERC4-213ENST00000506515 ARL4DP49703 201 aa9.41□□□□□ -0.9
HERC4-213ENST00000506515 DDX54Q8TDD1 881 aaKnown RBP9.41□□□□□ -0.9
HERC4-213ENST00000506515 CARD10Q9BWT7 1032 aa9.41□□□□□ -0.9
HERC4-213ENST00000506515 CBX8Q9HC52 389 aa9.41□□□□□ -0.9
HERC4-213ENST00000506515 PRDM6Q9NQX0 595 aa9.41□□□□□ -0.9
HERC4-213ENST00000506515 INPP5FQ9Y2H2 1132 aa9.41□□□□□ -0.9
HERC4-213ENST00000506515 SAMM50Q9Y512 469 aa9.41□□□□□ -0.9
HERC4-213ENST00000506515 FSCN2O14926 492 aa9.4□□□□□ -0.9
HERC4-213ENST00000506515 LMNB1P20700 586 aa9.4□□□□□ -0.9
HERC4-213ENST00000506515 NME2P22392 152 aa9.4□□□□□ -0.9
HERC4-213ENST00000506515 PIP4K2BP78356 416 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms