RNA–Protein interactions for RNA: ENST00000506491.5

KLHL3-207, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-207ENST00000506491 PLCG2P16885 1265 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 CALML3P27482 149 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 WDR44Q5JSH3 913 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 MIGA1Q8NAN2 632 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 PRPF31Q8WWY3 499 aaKnown RBP12.59□□□□□ -0.39
KLHL3-207ENST00000506491 CCDC42Q96M95 316 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 ARFGAP3Q9NP61 516 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 RTL1A6NKG5 1358 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 TRIM75PA6NK02 468 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 SYT1P21579 422 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 SLC8A3P57103 927 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 SEL1L2Q5TEA6 688 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 NBPF14Q5TI25 921 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 TCEANC2Q96MN5 208 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 RBM8AQ9Y5S9 174 aaKnown RBP12.59□□□□□ -0.39
KLHL3-207ENST00000506491 FNBP1Q96RU3 617 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 FRMD4BQ9Y2L6 1034 aa12.59□□□□□ -0.39
KLHL3-207ENST00000506491 GOLGA1Q92805 767 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 ZBTB9Q96C00 473 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 SKILP12757 684 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 BIRC3Q13489 604 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 PPP1R9BQ96SB3 815 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 ZNF408Q9H9D4 720 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 MTRF1LQ9UGC7 380 aaKnown RBP12.58□□□□□ -0.4
KLHL3-207ENST00000506491 UBAP1LF5GYI3 381 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 DAPK3O43293 454 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 SATB1Q01826 763 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 INF2Q27J81 1249 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 JAKMIP2Q96AA8 810 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 JAG2Q9Y219 1238 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 MSH6P52701 1360 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 TLDC2A0PJX2 215 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 GNAT2P19087 354 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 DZIP3Q86Y13 1208 aaKnown RBP12.58□□□□□ -0.4
KLHL3-207ENST00000506491 GUCA1BQ9UMX6 200 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 COPS6Q7L5N1 327 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 FAM204AQ9H8W3 233 aa12.58□□□□□ -0.4
KLHL3-207ENST00000506491 NSFL1CQ9UNZ2 370 aaKnown RBP12.58□□□□□ -0.4
KLHL3-207ENST00000506491 STX17P56962 302 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 RAB3GAP1Q15042 981 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
KLHL3-207ENST00000506491 PAG1Q9NWQ8 432 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 TMOD4Q9NZQ9 345 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 MTUS1Q9ULD2 1270 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 RTCBQ9Y3I0 505 aaKnown RBP12.57□□□□□ -0.4
KLHL3-207ENST00000506491 STX10O60499 249 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 TMX3Q96JJ7 454 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 EYA3Q99504 573 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 SLC39A6Q13433 755 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 VPS52Q8N1B4 723 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 EPSTI1Q96J88 318 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 PICK1Q9NRD5 415 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 SAP30BPQ9UHR5 308 aaKnown RBP12.57□□□□□ -0.4
KLHL3-207ENST00000506491 SNAPC4Q5SXM2 1469 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 LDHBP07195 334 aaKnown RBP12.57□□□□□ -0.4
KLHL3-207ENST00000506491 KMT5BQ4FZB7 885 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 DTHD1Q6ZMT9 781 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 UBLCP1Q8WVY7 318 aaPredicted RBP12.57□□□□□ -0.4
KLHL3-207ENST00000506491 ZNF710Q8N1W2 664 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 KIFAP3Q92845 792 aa12.57□□□□□ -0.4
KLHL3-207ENST00000506491 GNA11P29992 359 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 LMBR1LQ6UX01 489 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 TPTE2Q6XPS3 522 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 CHST3Q7LGC8 479 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 KARSQ15046 597 aaKnown RBP12.56□□□□□ -0.4
KLHL3-207ENST00000506491 SETDB1Q15047 1291 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 DDB1Q16531 1140 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 FBXO31Q5XUX0 539 aaPredicted RBP12.56□□□□□ -0.4
KLHL3-207ENST00000506491 CPLX4Q7Z7G2 160 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 DNAJC25Q9H1X3 360 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 PARP1P09874 1014 aaKnown RBP12.56□□□□□ -0.4
KLHL3-207ENST00000506491 LEO1Q8WVC0 666 aaPredicted RBP12.56□□□□□ -0.4
KLHL3-207ENST00000506491 MRC2Q9UBG0 1479 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.56□□□□□ -0.4
KLHL3-207ENST00000506491 CCDC169A6NNP5 214 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 IL15P40933 162 aaPredicted RBP12.56□□□□□ -0.4
KLHL3-207ENST00000506491 CALCOCO2Q13137 446 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 CUL4BQ13620 913 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 USP48Q86UV5 1035 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 CADPS2Q86UW7 1296 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 RBM17Q96I25 401 aaKnown RBP12.56□□□□□ -0.4
KLHL3-207ENST00000506491 NACA2Q9H009 215 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 PPANQ9NQ55 473 aaKnown RBP12.56□□□□□ -0.4
KLHL3-207ENST00000506491 TTC36A6NLP5 189 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 CHMP2AO43633 222 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 EPB41P11171 864 aaKnown RBP12.56□□□□□ -0.4
KLHL3-207ENST00000506491 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
KLHL3-207ENST00000506491 CCDC110Q8TBZ0 833 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 EFCAB5A4FU69 1503 aa12.56□□□□□ -0.4
KLHL3-207ENST00000506491 CIB2O75838 187 aa12.55□□□□□ -0.4
KLHL3-207ENST00000506491 IVLP07476 585 aa12.55□□□□□ -0.4
KLHL3-207ENST00000506491 DNAJC21Q5F1R6 531 aaKnown RBP12.55□□□□□ -0.4
KLHL3-207ENST00000506491 BMP2KLQ5H9B9 411 aa12.55□□□□□ -0.4
KLHL3-207ENST00000506491 ACEP12821 1306 aa12.55□□□□□ -0.4
KLHL3-207ENST00000506491 ERCC5P28715 1186 aaPredicted RBP12.55□□□□□ -0.4
KLHL3-207ENST00000506491 CD109Q6YHK3 1445 aa12.55□□□□□ -0.4
KLHL3-207ENST00000506491 TSGA10Q9BZW7 698 aa12.55□□□□□ -0.4
KLHL3-207ENST00000506491 TRIM6Q9C030 488 aaPredicted RBP12.55□□□□□ -0.4
KLHL3-207ENST00000506491 SPTLC2O15270 562 aa12.55□□□□□ -0.4
KLHL3-207ENST00000506491 ZEB2O60315 1214 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms