RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 SEC31BQ9NQW1 1179 aa6.72□□□□□ -1.33
LINC01088-202ENST00000505149 F8W735 103 aaPredicted RBP6.71□□□□□ -1.34
LINC01088-202ENST00000505149 POLR3DP05423 398 aaPredicted RBP6.71□□□□□ -1.34
LINC01088-202ENST00000505149 ITPKAP23677 461 aa6.71□□□□□ -1.34
LINC01088-202ENST00000505149 PLCB3Q01970 1234 aa6.71□□□□□ -1.34
LINC01088-202ENST00000505149 ENOX2Q16206 610 aaKnown RBP6.71□□□□□ -1.34
LINC01088-202ENST00000505149 FOXD4L6Q3SYB3 417 aaPredicted RBP6.71□□□□□ -1.34
LINC01088-202ENST00000505149 FOXD4L3Q6VB84 417 aaPredicted RBP6.71□□□□□ -1.34
LINC01088-202ENST00000505149 WFDC12Q8WWY7 111 aa6.71□□□□□ -1.34
LINC01088-202ENST00000505149 LIN7BQ9HAP6 207 aa6.71□□□□□ -1.34
LINC01088-202ENST00000505149 NPHS2Q9NP85 383 aa6.71□□□□□ -1.34
LINC01088-202ENST00000505149 USP21Q9UK80 565 aa6.71□□□□□ -1.34
LINC01088-202ENST00000505149 COL19A1Q14993 1142 aa6.7□□□□□ -1.34
LINC01088-202ENST00000505149 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.7□□□□□ -1.34
LINC01088-202ENST00000505149 DZIP1LQ8IYY4 767 aaKnown RBP6.7□□□□□ -1.34
LINC01088-202ENST00000505149 FBF1Q8TES7 1133 aa6.7□□□□□ -1.34
LINC01088-202ENST00000505149 AKTIPQ9H8T0 292 aa6.7□□□□□ -1.34
LINC01088-202ENST00000505149 A0A096LPE4 126 aa6.69□□□□□ -1.34
LINC01088-202ENST00000505149 A0A1W2PPZ6 126 aa6.69□□□□□ -1.34
LINC01088-202ENST00000505149 H2AFB1P0C5Y9 115 aa6.69□□□□□ -1.34
LINC01088-202ENST00000505149 H2AFB2P0C5Z0 115 aa6.69□□□□□ -1.34
LINC01088-202ENST00000505149 ESRRAP11474 423 aaPredicted RBP6.69□□□□□ -1.34
LINC01088-202ENST00000505149 NOS3P29474 1203 aa6.69□□□□□ -1.34
LINC01088-202ENST00000505149 ARL4DP49703 201 aa6.69□□□□□ -1.34
LINC01088-202ENST00000505149 C19orf57Q0VDD7 668 aa6.69□□□□□ -1.34
LINC01088-202ENST00000505149 IKBKEQ14164 716 aa6.69□□□□□ -1.34
LINC01088-202ENST00000505149 NKAPLQ5M9Q1 402 aa6.69□□□□□ -1.34
LINC01088-202ENST00000505149 KRTAP4-12Q9BQ66 201 aa6.69□□□□□ -1.34
LINC01088-202ENST00000505149 CLEC4MQ9H2X3 399 aaPredicted RBP6.69□□□□□ -1.34
LINC01088-202ENST00000505149 TPSG1Q9NRR2 321 aa6.69□□□□□ -1.34
LINC01088-202ENST00000505149 TRAK1Q9UPV9 953 aa6.69□□□□□ -1.34
LINC01088-202ENST00000505149 SOX1O00570 391 aaPredicted RBP6.68□□□□□ -1.34
LINC01088-202ENST00000505149 ADAM11O75078 769 aa6.68□□□□□ -1.34
LINC01088-202ENST00000505149 GRIA4P48058 902 aa6.68□□□□□ -1.34
LINC01088-202ENST00000505149 RPS26P11Q5JNZ5 115 aaPredicted RBP6.68□□□□□ -1.34
LINC01088-202ENST00000505149 TXNDC11Q6PKC3 985 aa6.68□□□□□ -1.34
LINC01088-202ENST00000505149 AEBP1Q8IUX7 1158 aa6.68□□□□□ -1.34
LINC01088-202ENST00000505149 GLIS3Q8NEA6 775 aa6.68□□□□□ -1.34
LINC01088-202ENST00000505149 ASAP3Q8TDY4 903 aa6.68□□□□□ -1.34
LINC01088-202ENST00000505149 FOXD4L4Q8WXT5 416 aaPredicted RBP6.68□□□□□ -1.34
LINC01088-202ENST00000505149 KLHDC7BQ96G42 594 aa6.68□□□□□ -1.34
LINC01088-202ENST00000505149 EHD4Q9H223 541 aa6.68□□□□□ -1.34
LINC01088-202ENST00000505149 ABCB6Q9NP58 842 aa6.68□□□□□ -1.34
LINC01088-202ENST00000505149 KCNK4Q9NYG8 393 aa6.68□□□□□ -1.34
LINC01088-202ENST00000505149 ADAM23O75077 832 aa6.67□□□□□ -1.34
LINC01088-202ENST00000505149 IREB2P48200 963 aaKnown RBP6.67□□□□□ -1.34
LINC01088-202ENST00000505149 RSPO4Q2I0M5 234 aaPredicted RBP6.67□□□□□ -1.34
LINC01088-202ENST00000505149 CARD10Q9BWT7 1032 aa6.67□□□□□ -1.34
LINC01088-202ENST00000505149 NRSN2Q9GZP1 204 aa6.67□□□□□ -1.34
LINC01088-202ENST00000505149 ZNF576Q9H609 170 aa6.67□□□□□ -1.34
LINC01088-202ENST00000505149 ZFYVE1Q9HBF4 777 aa6.67□□□□□ -1.34
LINC01088-202ENST00000505149 PNMA6FA0A0J9YX94 578 aa6.66□□□□□ -1.34
LINC01088-202ENST00000505149 MEGF11A6BM72 1044 aa6.66□□□□□ -1.34
LINC01088-202ENST00000505149 METTL12A8MUP2 240 aa6.66□□□□□ -1.34
LINC01088-202ENST00000505149 WISP1O95388 367 aa6.66□□□□□ -1.34
LINC01088-202ENST00000505149 B3GALT4O96024 378 aa6.66□□□□□ -1.34
LINC01088-202ENST00000505149 XRCC5P13010 732 aaKnown RBP6.66□□□□□ -1.34
LINC01088-202ENST00000505149 PCDH1Q08174 1060 aa6.66□□□□□ -1.34
LINC01088-202ENST00000505149 DOC2BQ14184 412 aa6.66□□□□□ -1.34
LINC01088-202ENST00000505149 GRM2Q14416 872 aa6.66□□□□□ -1.34
LINC01088-202ENST00000505149 ALG1LQ6GMV1 187 aa6.66□□□□□ -1.34
LINC01088-202ENST00000505149 KIAA1211Q6ZU35 1233 aa6.66□□□□□ -1.34
LINC01088-202ENST00000505149 SRCIN1Q9C0H9 1055 aa6.66□□□□□ -1.34
LINC01088-202ENST00000505149 TMEM238LA0A1B0GVL6 79 aa6.65□□□□□ -1.34
LINC01088-202ENST00000505149 K7ELQ4 463 aaPredicted RBP6.65□□□□□ -1.34
LINC01088-202ENST00000505149 GIPC1O14908 333 aa6.65□□□□□ -1.34
LINC01088-202ENST00000505149 DUOXA2Q1HG44 320 aa6.65□□□□□ -1.34
LINC01088-202ENST00000505149 ZNF423Q2M1K9 1284 aa6.65□□□□□ -1.34
LINC01088-202ENST00000505149 SPRED3Q2MJR0 410 aa6.65□□□□□ -1.34
LINC01088-202ENST00000505149 UVSSAQ2YD98 709 aa6.65□□□□□ -1.34
LINC01088-202ENST00000505149 EPS8L3Q8TE67 593 aaKnown RBP6.65□□□□□ -1.34
LINC01088-202ENST00000505149 MEGF10Q96KG7 1140 aa6.65□□□□□ -1.34
LINC01088-202ENST00000505149 NLRP2Q9NX02 1062 aa6.65□□□□□ -1.34
LINC01088-202ENST00000505149 GADD45BO75293 160 aaPredicted RBP6.64□□□□□ -1.35
LINC01088-202ENST00000505149 FURINP09958 794 aa6.64□□□□□ -1.35
LINC01088-202ENST00000505149 CDC25BP30305 580 aa6.64□□□□□ -1.35
LINC01088-202ENST00000505149 ACAD11Q709F0 780 aa6.64□□□□□ -1.35
LINC01088-202ENST00000505149 ANKRD24Q8TF21 1146 aa6.64□□□□□ -1.35
LINC01088-202ENST00000505149 SLC7A3Q8WY07 619 aa6.64□□□□□ -1.35
LINC01088-202ENST00000505149 CEP41Q9BYV8 373 aa6.64□□□□□ -1.35
LINC01088-202ENST00000505149 RNF208Q9H0X6 261 aa6.64□□□□□ -1.35
LINC01088-202ENST00000505149 DDX3YO15523 660 aaKnown RBP6.63□□□□□ -1.35
LINC01088-202ENST00000505149 FGD1P98174 961 aa6.63□□□□□ -1.35
LINC01088-202ENST00000505149 HGSNATQ68CP4 663 aa6.63□□□□□ -1.35
LINC01088-202ENST00000505149 ANKRD34AQ69YU3 496 aa6.63□□□□□ -1.35
LINC01088-202ENST00000505149 DNAJC14Q6Y2X3 702 aaPredicted RBP6.63□□□□□ -1.35
LINC01088-202ENST00000505149 DDX54Q8TDD1 881 aaKnown RBP6.63□□□□□ -1.35
LINC01088-202ENST00000505149 UBASH3BQ8TF42 649 aa6.63□□□□□ -1.35
LINC01088-202ENST00000505149 FRMD6Q96NE9 622 aa6.63□□□□□ -1.35
LINC01088-202ENST00000505149 SUGCTQ9HAC7 445 aa6.63□□□□□ -1.35
LINC01088-202ENST00000505149 PPP4R2Q9NY27 417 aa6.63□□□□□ -1.35
LINC01088-202ENST00000505149 LOC100289279A0A1B0GTE1 492 aa6.62□□□□□ -1.35
LINC01088-202ENST00000505149 DYRK3O43781 588 aa6.62□□□□□ -1.35
LINC01088-202ENST00000505149 ALX3O95076 343 aa6.62□□□□□ -1.35
LINC01088-202ENST00000505149 P4HBP07237 508 aaKnown RBP6.62□□□□□ -1.35
LINC01088-202ENST00000505149 ERCC3P19447 782 aa6.62□□□□□ -1.35
LINC01088-202ENST00000505149 ATP2B2Q01814 1243 aa6.62□□□□□ -1.35
LINC01088-202ENST00000505149 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.62□□□□□ -1.35
LINC01088-202ENST00000505149 SLC51AQ86UW1 340 aa6.62□□□□□ -1.35
LINC01088-202ENST00000505149 TP53INP1Q96A56 240 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms