RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 TMEM87AQ8NBN3 555 aa11.39□□□□□ -0.59
CSF1R-203ENST00000504875 FTOQ9C0B1 505 aaKnown RBP eCLIP11.39□□□□□ -0.59
CSF1R-203ENST00000504875 PUS7LQ9H0K6 701 aaKnown RBP11.39□□□□□ -0.59
CSF1R-203ENST00000504875 LRP2BPQ9P2M1 347 aa11.39□□□□□ -0.59
CSF1R-203ENST00000504875 SLC5A1P13866 664 aa11.38□□□□□ -0.59
CSF1R-203ENST00000504875 TDO2P48775 406 aa11.38□□□□□ -0.59
CSF1R-203ENST00000504875 CCDC82Q8N4S0 544 aa11.38□□□□□ -0.59
CSF1R-203ENST00000504875 TTLL11Q8NHH1 800 aa11.38□□□□□ -0.59
CSF1R-203ENST00000504875 NAPBQ9H115 298 aa11.38□□□□□ -0.59
CSF1R-203ENST00000504875 ZSCAN16Q9H4T2 348 aaPredicted RBP11.38□□□□□ -0.59
CSF1R-203ENST00000504875 NIP7Q9Y221 180 aaKnown RBP eCLIP11.38□□□□□ -0.59
CSF1R-203ENST00000504875 PDE8AO60658 829 aa11.38□□□□□ -0.59
CSF1R-203ENST00000504875 TYRO3Q06418 890 aa11.38□□□□□ -0.59
CSF1R-203ENST00000504875 ANO6Q4KMQ2 910 aa11.38□□□□□ -0.59
CSF1R-203ENST00000504875 USPL1Q5W0Q7 1092 aa11.38□□□□□ -0.59
CSF1R-203ENST00000504875 LUZP1Q86V48 1076 aa11.38□□□□□ -0.59
CSF1R-203ENST00000504875 CCAR1Q8IX12 1150 aaKnown RBP11.38□□□□□ -0.59
CSF1R-203ENST00000504875 DDX19AQ9NUU7 478 aaKnown RBP11.38□□□□□ -0.59
CSF1R-203ENST00000504875 PHKA1P46020 1223 aa11.38□□□□□ -0.59
CSF1R-203ENST00000504875 TRIM29Q14134 588 aa11.38□□□□□ -0.59
CSF1R-203ENST00000504875 UVSSAQ2YD98 709 aa11.38□□□□□ -0.59
CSF1R-203ENST00000504875 NOL7Q9UMY1 257 aaKnown RBP11.38□□□□□ -0.59
CSF1R-203ENST00000504875 COL15A1P39059 1388 aa11.38□□□□□ -0.59
CSF1R-203ENST00000504875 ATP2B1P20020 1258 aa11.37□□□□□ -0.59
CSF1R-203ENST00000504875 FSIP1Q8NA03 581 aa11.37□□□□□ -0.59
CSF1R-203ENST00000504875 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.37□□□□□ -0.59
CSF1R-203ENST00000504875 DYNC1I1O14576 645 aa11.37□□□□□ -0.59
CSF1R-203ENST00000504875 PFKFB2O60825 505 aa11.37□□□□□ -0.59
CSF1R-203ENST00000504875 DMTNQ08495 405 aa11.37□□□□□ -0.59
CSF1R-203ENST00000504875 MAP3K12Q12852 859 aa11.37□□□□□ -0.59
CSF1R-203ENST00000504875 TTF1Q15361 905 aaPredicted RBP11.37□□□□□ -0.59
CSF1R-203ENST00000504875 NSUN7Q8NE18 718 aaKnown RBP11.37□□□□□ -0.59
CSF1R-203ENST00000504875 C5P01031 1676 aa11.37□□□□□ -0.59
CSF1R-203ENST00000504875 SCN11AQ9UI33 1791 aa11.37□□□□□ -0.59
CSF1R-203ENST00000504875 NR1I2O75469 434 aa11.37□□□□□ -0.59
CSF1R-203ENST00000504875 TSGA10IPQ3SY00 556 aa11.37□□□□□ -0.59
CSF1R-203ENST00000504875 MAGEB6Q8N7X4 407 aa11.37□□□□□ -0.59
CSF1R-203ENST00000504875 CCDC94Q9BW85 323 aaPredicted RBP11.37□□□□□ -0.59
CSF1R-203ENST00000504875 DNAJC25Q9H1X3 360 aa11.37□□□□□ -0.59
CSF1R-203ENST00000504875 AFDNP55196 1824 aaKnown RBP11.36□□□□□ -0.59
CSF1R-203ENST00000504875 PDIA3P30101 505 aaKnown RBP11.36□□□□□ -0.59
CSF1R-203ENST00000504875 MCAMP43121 646 aa11.36□□□□□ -0.59
CSF1R-203ENST00000504875 UTP14AQ9BVJ6 771 aaKnown RBP11.36□□□□□ -0.59
CSF1R-203ENST00000504875 RAI14Q9P0K7 980 aa11.36□□□□□ -0.59
CSF1R-203ENST00000504875 ZNF532Q9HCE3 1301 aa11.36□□□□□ -0.59
CSF1R-203ENST00000504875 B4E1Z4 1266 aa11.36□□□□□ -0.59
CSF1R-203ENST00000504875 CYP19A1P11511 503 aaPredicted RBP11.36□□□□□ -0.59
CSF1R-203ENST00000504875 ZNF165P49910 485 aa11.36□□□□□ -0.59
CSF1R-203ENST00000504875 KCNQ4P56696 695 aa11.36□□□□□ -0.59
CSF1R-203ENST00000504875 CCDC102BQ68D86 513 aa11.36□□□□□ -0.59
CSF1R-203ENST00000504875 MIGA1Q8NAN2 632 aa11.36□□□□□ -0.59
CSF1R-203ENST00000504875 PHRF1Q9P1Y6 1649 aaKnown RBP11.36□□□□□ -0.59
CSF1R-203ENST00000504875 MINDY4BA8MYZ0 360 aa11.36□□□□□ -0.59
CSF1R-203ENST00000504875 HS1BP3Q53T59 392 aa11.36□□□□□ -0.59
CSF1R-203ENST00000504875 C17orf53Q8N3J3 647 aaPredicted RBP11.36□□□□□ -0.59
CSF1R-203ENST00000504875 FAM200AQ8TCP9 573 aa11.36□□□□□ -0.59
CSF1R-203ENST00000504875 NUP133Q8WUM0 1156 aa11.36□□□□□ -0.59
CSF1R-203ENST00000504875 ERCC4Q92889 916 aaPredicted RBP11.36□□□□□ -0.59
CSF1R-203ENST00000504875 SEC31BQ9NQW1 1179 aa11.36□□□□□ -0.59
CSF1R-203ENST00000504875 ALS2Q96Q42 1657 aa11.35□□□□□ -0.59
CSF1R-203ENST00000504875 ERICH2A1L162 156 aa11.35□□□□□ -0.59
CSF1R-203ENST00000504875 PDE8BO95263 885 aa11.35□□□□□ -0.59
CSF1R-203ENST00000504875 UQCRFS1P1P0C7P4 283 aa11.35□□□□□ -0.59
CSF1R-203ENST00000504875 CCDC69A6NI79 296 aa11.35□□□□□ -0.59
CSF1R-203ENST00000504875 IFIT3O14879 490 aaKnown RBP11.35□□□□□ -0.59
CSF1R-203ENST00000504875 METAP2P50579 478 aaKnown RBP eCLIP11.35□□□□□ -0.59
CSF1R-203ENST00000504875 USP28Q96RU2 1077 aa11.35□□□□□ -0.59
CSF1R-203ENST00000504875 LLPHQ9BRT6 129 aaKnown RBP11.35□□□□□ -0.59
CSF1R-203ENST00000504875 MYL10Q9BUA6 226 aa11.35□□□□□ -0.59
CSF1R-203ENST00000504875 PALLDQ8WX93 1383 aa11.35□□□□□ -0.59
CSF1R-203ENST00000504875 ZBTB22O15209 634 aa11.34□□□□□ -0.59
CSF1R-203ENST00000504875 MBD4O95243 580 aa11.34□□□□□ -0.59
CSF1R-203ENST00000504875 PUM3Q15397 648 aaKnown RBP11.34□□□□□ -0.59
CSF1R-203ENST00000504875 TMEM67Q5HYA8 995 aa11.34□□□□□ -0.59
CSF1R-203ENST00000504875 PDLIM2Q96JY6 352 aa11.34□□□□□ -0.59
CSF1R-203ENST00000504875 CCDC87Q9NVE4 849 aa11.34□□□□□ -0.59
CSF1R-203ENST00000504875 CHAF1AQ13111 956 aaPredicted RBP11.34□□□□□ -0.59
CSF1R-203ENST00000504875 CCDC152Q4G0S7 254 aa11.34□□□□□ -0.59
CSF1R-203ENST00000504875 NACAP1Q9BZK3 213 aa11.34□□□□□ -0.59
CSF1R-203ENST00000504875 ARMT1Q9H993 441 aa11.34□□□□□ -0.59
CSF1R-203ENST00000504875 WWC3Q9ULE0 1092 aa11.34□□□□□ -0.59
CSF1R-203ENST00000504875 RESTQ13127 1097 aa11.34□□□□□ -0.59
CSF1R-203ENST00000504875 ZKSCAN3Q9BRR0 538 aa11.34□□□□□ -0.59
CSF1R-203ENST00000504875 PIH1D3Q9NQM4 214 aaKnown RBP11.34□□□□□ -0.59
CSF1R-203ENST00000504875 GJB4Q9NTQ9 266 aa11.34□□□□□ -0.59
CSF1R-203ENST00000504875 GOLGA8AA7E2F4 631 aa11.33□□□□□ -0.59
CSF1R-203ENST00000504875 PDE6AP16499 860 aa11.33□□□□□ -0.59
CSF1R-203ENST00000504875 CRKLP46109 303 aaKnown RBP11.33□□□□□ -0.59
CSF1R-203ENST00000504875 TRIM28Q13263 835 aaKnown RBP11.33□□□□□ -0.59
CSF1R-203ENST00000504875 FBXO3Q9UK99 471 aa11.33□□□□□ -0.59
CSF1R-203ENST00000504875 RFX7Q2KHR2 1363 aa11.33□□□□□ -0.6
CSF1R-203ENST00000504875 LMTK3Q96Q04 1460 aa11.33□□□□□ -0.6
CSF1R-203ENST00000504875 A0A087WWV3 80 aa11.33□□□□□ -0.6
CSF1R-203ENST00000504875 SUSD4Q5VX71 490 aa11.33□□□□□ -0.6
CSF1R-203ENST00000504875 CCDC24Q8N4L8 307 aa11.33□□□□□ -0.6
CSF1R-203ENST00000504875 LPIN2Q92539 896 aa11.33□□□□□ -0.6
CSF1R-203ENST00000504875 A0A1B0GVL5 298 aa11.33□□□□□ -0.6
CSF1R-203ENST00000504875 BIN1O00499 593 aa11.33□□□□□ -0.6
CSF1R-203ENST00000504875 MARCKSP29966 332 aaPredicted RBP11.33□□□□□ -0.6
CSF1R-203ENST00000504875 IL6STP40189 918 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms