RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 PIP4K2BP78356 416 aa6.57□□□□□ -1.36
RFC1-208ENST00000504849 PAOXQ6QHF9 649 aa6.57□□□□□ -1.36
RFC1-208ENST00000504849 NLRP13Q86W25 1043 aa6.57□□□□□ -1.36
RFC1-208ENST00000504849 LRRC56Q8IYG6 542 aaPredicted RBP6.57□□□□□ -1.36
RFC1-208ENST00000504849 FBLIM1Q8WUP2 373 aa6.57□□□□□ -1.36
RFC1-208ENST00000504849 WNT8BQ93098 351 aa6.57□□□□□ -1.36
RFC1-208ENST00000504849 LRFN2Q9ULH4 789 aa6.57□□□□□ -1.36
RFC1-208ENST00000504849 H3BRJ5 948 aa6.56□□□□□ -1.36
RFC1-208ENST00000504849 RAD21O60216 631 aa6.56□□□□□ -1.36
RFC1-208ENST00000504849 RNASE1P07998 156 aaKnown RBP6.56□□□□□ -1.36
RFC1-208ENST00000504849 FNBP4Q8N3X1 1017 aaPredicted RBP6.56□□□□□ -1.36
RFC1-208ENST00000504849 SMG8Q8ND04 991 aaKnown RBP6.56□□□□□ -1.36
RFC1-208ENST00000504849 EZH1Q92800 747 aaPredicted RBP6.56□□□□□ -1.36
RFC1-208ENST00000504849 UCN2Q96RP3 112 aa6.56□□□□□ -1.36
RFC1-208ENST00000504849 SUGCTQ9HAC7 445 aa6.56□□□□□ -1.36
RFC1-208ENST00000504849 OSGEPQ9NPF4 335 aa6.56□□□□□ -1.36
RFC1-208ENST00000504849 MBNL3Q9NUK0 354 aaKnown RBP6.56□□□□□ -1.36
RFC1-208ENST00000504849 KIF4AO95239 1232 aa6.55□□□□□ -1.36
RFC1-208ENST00000504849 TSPAN15O95858 294 aa6.55□□□□□ -1.36
RFC1-208ENST00000504849 RAP1GAPP47736 663 aa6.55□□□□□ -1.36
RFC1-208ENST00000504849 HYAL2Q12891 473 aa6.55□□□□□ -1.36
RFC1-208ENST00000504849 ECM1Q16610 540 aa6.55□□□□□ -1.36
RFC1-208ENST00000504849 HGSNATQ68CP4 663 aa6.55□□□□□ -1.36
RFC1-208ENST00000504849 TREML1Q86YW5 311 aa6.55□□□□□ -1.36
RFC1-208ENST00000504849 POP1Q99575 1024 aaKnown RBP6.55□□□□□ -1.36
RFC1-208ENST00000504849 PBX4Q9BYU1 374 aa6.55□□□□□ -1.36
RFC1-208ENST00000504849 RC3H2Q9HBD1 1191 aaKnown RBP6.55□□□□□ -1.36
RFC1-208ENST00000504849 LRRC4CQ9HCJ2 640 aa6.55□□□□□ -1.36
RFC1-208ENST00000504849 ZSCAN22P10073 491 aaPredicted RBP6.54□□□□□ -1.36
RFC1-208ENST00000504849 FUT4P22083 530 aa6.54□□□□□ -1.36
RFC1-208ENST00000504849 SEC13P55735 322 aa6.54□□□□□ -1.36
RFC1-208ENST00000504849 ZNF765Q7L2R6 523 aa6.54□□□□□ -1.36
RFC1-208ENST00000504849 C12orf50Q8NA57 414 aaPredicted RBP6.54□□□□□ -1.36
RFC1-208ENST00000504849 ADAMTS19Q8TE59 1207 aa6.54□□□□□ -1.36
RFC1-208ENST00000504849 ZNF777Q9ULD5 760 aaPredicted RBP6.54□□□□□ -1.36
RFC1-208ENST00000504849 DLGAP3O95886 979 aa6.53□□□□□ -1.36
RFC1-208ENST00000504849 DRD2P14416 443 aa6.53□□□□□ -1.36
RFC1-208ENST00000504849 PTPRAP18433 802 aa6.53□□□□□ -1.36
RFC1-208ENST00000504849 PDE4CQ08493 712 aa6.53□□□□□ -1.36
RFC1-208ENST00000504849 C2CD4AQ8NCU7 369 aaPredicted RBP6.53□□□□□ -1.36
RFC1-208ENST00000504849 LRRN4CLQ8ND94 238 aa6.53□□□□□ -1.36
RFC1-208ENST00000504849 ZSCAN18Q8TBC5 510 aaPredicted RBP6.53□□□□□ -1.36
RFC1-208ENST00000504849 BNIP3Q12983 259 aa6.52□□□□□ -1.37
RFC1-208ENST00000504849 TMCO4Q5TGY1 634 aa6.52□□□□□ -1.37
RFC1-208ENST00000504849 CEP120Q8N960 986 aa6.52□□□□□ -1.37
RFC1-208ENST00000504849 RGS22Q8NE09 1264 aa6.52□□□□□ -1.37
RFC1-208ENST00000504849 ZNF503-AS2A6NEH8 195 aa6.51□□□□□ -1.37
RFC1-208ENST00000504849 LRRC10BA6NIK2 292 aa6.51□□□□□ -1.37
RFC1-208ENST00000504849 ATP9BO43861 1147 aa6.51□□□□□ -1.37
RFC1-208ENST00000504849 CRTC2Q53ET0 693 aaPredicted RBP6.51□□□□□ -1.37
RFC1-208ENST00000504849 NUTM2GQ5VZR2 741 aa6.51□□□□□ -1.37
RFC1-208ENST00000504849 AEBP1Q8IUX7 1158 aa6.51□□□□□ -1.37
RFC1-208ENST00000504849 SPACA7Q96KW9 195 aa6.51□□□□□ -1.37
RFC1-208ENST00000504849 RBM19Q9Y4C8 960 aaKnown RBP6.51□□□□□ -1.37
RFC1-208ENST00000504849 PATL2C9JE40 543 aaKnown RBP6.5□□□□□ -1.37
RFC1-208ENST00000504849 PPP1R15AO75807 674 aaPredicted RBP6.5□□□□□ -1.37
RFC1-208ENST00000504849 KRT1P04264 644 aa6.5□□□□□ -1.37
RFC1-208ENST00000504849 CD8BP10966 210 aa6.5□□□□□ -1.37
RFC1-208ENST00000504849 STK11IPQ8N1F8 1099 aa6.5□□□□□ -1.37
RFC1-208ENST00000504849 HINFPQ9BQA5 517 aa6.5□□□□□ -1.37
RFC1-208ENST00000504849 LOC100289279A0A1B0GTE1 492 aa6.49□□□□□ -1.37
RFC1-208ENST00000504849 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.49□□□□□ -1.37
RFC1-208ENST00000504849 DUSP27Q5VZP5 1158 aa6.49□□□□□ -1.37
RFC1-208ENST00000504849 RETREG2Q8NC44 543 aa6.49□□□□□ -1.37
RFC1-208ENST00000504849 SLC7A3Q8WY07 619 aa6.49□□□□□ -1.37
RFC1-208ENST00000504849 CYP2E1P05181 493 aaPredicted RBP6.48□□□□□ -1.37
RFC1-208ENST00000504849 INHBBP09529 407 aa6.48□□□□□ -1.37
RFC1-208ENST00000504849 USP11P51784 963 aa6.48□□□□□ -1.37
RFC1-208ENST00000504849 CYP4F12Q9HCS2 524 aa6.48□□□□□ -1.37
RFC1-208ENST00000504849 COG6Q9Y2V7 657 aa6.48□□□□□ -1.37
RFC1-208ENST00000504849 NFKBIEO00221 500 aa6.47□□□□□ -1.37
RFC1-208ENST00000504849 WEE1P30291 646 aa6.47□□□□□ -1.37
RFC1-208ENST00000504849 MFAP1P55081 439 aaKnown RBP6.47□□□□□ -1.37
RFC1-208ENST00000504849 FAM26DQ5JW98 314 aa6.47□□□□□ -1.37
RFC1-208ENST00000504849 AMIGO3Q86WK7 504 aa6.47□□□□□ -1.37
RFC1-208ENST00000504849 ETFBKMTQ8IXQ9 262 aa6.47□□□□□ -1.37
RFC1-208ENST00000504849 POM121Q96HA1 1249 aa6.47□□□□□ -1.37
RFC1-208ENST00000504849 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.47□□□□□ -1.37
RFC1-208ENST00000504849 UBAP1LF5GYI3 381 aa6.46□□□□□ -1.38
RFC1-208ENST00000504849 FOXO3O43524 673 aa6.46□□□□□ -1.38
RFC1-208ENST00000504849 SCNN1AP37088 669 aa6.46□□□□□ -1.38
RFC1-208ENST00000504849 CD96P40200 585 aa6.46□□□□□ -1.38
RFC1-208ENST00000504849 CYP27A1Q02318 531 aa6.46□□□□□ -1.38
RFC1-208ENST00000504849 C19orf57Q0VDD7 668 aa6.46□□□□□ -1.38
RFC1-208ENST00000504849 MLANAQ16655 118 aa6.46□□□□□ -1.38
RFC1-208ENST00000504849 C20orf173Q96LM9 149 aa6.46□□□□□ -1.38
RFC1-208ENST00000504849 FAM53CQ9NYF3 392 aa6.46□□□□□ -1.38
RFC1-208ENST00000504849 CRIM1Q9NZV1 1036 aa6.46□□□□□ -1.38
RFC1-208ENST00000504849 SOX13Q9UN79 622 aa6.46□□□□□ -1.38
RFC1-208ENST00000504849 CTSWP56202 376 aa6.45□□□□□ -1.38
RFC1-208ENST00000504849 CABP4P57796 275 aa6.45□□□□□ -1.38
RFC1-208ENST00000504849 COX20Q5RI15 118 aa6.45□□□□□ -1.38
RFC1-208ENST00000504849 SEZ6L2Q6UXD5 910 aa6.45□□□□□ -1.38
RFC1-208ENST00000504849 FLAD1Q8NFF5 587 aa6.45□□□□□ -1.38
RFC1-208ENST00000504849 MISP3Q96FF7 219 aa6.45□□□□□ -1.38
RFC1-208ENST00000504849 GZF1Q9H116 711 aaPredicted RBP6.45□□□□□ -1.38
RFC1-208ENST00000504849 MTMR7Q9Y216 660 aa6.45□□□□□ -1.38
RFC1-208ENST00000504849 POM121CA8CG34 1229 aa6.44□□□□□ -1.38
RFC1-208ENST00000504849 NFICP08651 508 aa6.44□□□□□ -1.38
RFC1-208ENST00000504849 ACPPP15309 386 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms