RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 CCDC87Q9NVE4 849 aa10.78□□□□□ -0.68
UBE2B-204ENST00000504431 CCDC9Q9Y3X0 531 aaKnown RBP10.78□□□□□ -0.68
UBE2B-204ENST00000504431 CCDC144AA2RUR9 1427 aa10.77□□□□□ -0.68
UBE2B-204ENST00000504431 IQGAP1P46940 1657 aa10.77□□□□□ -0.69
UBE2B-204ENST00000504431 UBAP1LF5GYI3 381 aa10.77□□□□□ -0.69
UBE2B-204ENST00000504431 XYLBO75191 536 aa10.77□□□□□ -0.69
UBE2B-204ENST00000504431 BMP4P12644 408 aa10.77□□□□□ -0.69
UBE2B-204ENST00000504431 ERCC3P19447 782 aa10.77□□□□□ -0.69
UBE2B-204ENST00000504431 CD33P20138 364 aa10.77□□□□□ -0.69
UBE2B-204ENST00000504431 MAP2K3P46734 347 aa10.77□□□□□ -0.69
UBE2B-204ENST00000504431 GJD3Q8N144 294 aa10.77□□□□□ -0.69
UBE2B-204ENST00000504431 TMC1Q8TDI8 760 aa10.77□□□□□ -0.69
UBE2B-204ENST00000504431 DMRTB1Q96MA1 342 aa10.77□□□□□ -0.69
UBE2B-204ENST00000504431 ZFYVE9O95405 1425 aa10.76□□□□□ -0.69
UBE2B-204ENST00000504431 KDM5AP29375 1690 aaKnown RBP10.76□□□□□ -0.69
UBE2B-204ENST00000504431 SPEM2Q0P670 501 aa10.76□□□□□ -0.69
UBE2B-204ENST00000504431 C8orf34Q49A92 452 aa10.76□□□□□ -0.69
UBE2B-204ENST00000504431 PDE12Q6L8Q7 609 aaKnown RBP10.76□□□□□ -0.69
UBE2B-204ENST00000504431 SIN3AQ96ST3 1273 aa10.76□□□□□ -0.69
UBE2B-204ENST00000504431 STRN4Q9NRL3 753 aa10.76□□□□□ -0.69
UBE2B-204ENST00000504431 PRR12Q9ULL5 1215 aa10.76□□□□□ -0.69
UBE2B-204ENST00000504431 KCNMB2Q9Y691 235 aa10.76□□□□□ -0.69
UBE2B-204ENST00000504431 ANKRD30BQ9BXX2 1392 aa10.76□□□□□ -0.69
UBE2B-204ENST00000504431 NEFLP07196 543 aa10.75□□□□□ -0.69
UBE2B-204ENST00000504431 ASB16Q96NS5 453 aa10.75□□□□□ -0.69
UBE2B-204ENST00000504431 AVENQ9NQS1 362 aaPredicted RBP10.75□□□□□ -0.69
UBE2B-204ENST00000504431 PODXL2Q9NZ53 605 aa10.75□□□□□ -0.69
UBE2B-204ENST00000504431 MED14O60244 1454 aa10.74□□□□□ -0.69
UBE2B-204ENST00000504431 MFAP1P55081 439 aaKnown RBP10.74□□□□□ -0.69
UBE2B-204ENST00000504431 ZNF438Q7Z4V0 828 aa10.74□□□□□ -0.69
UBE2B-204ENST00000504431 FAM129BQ96TA1 746 aa10.74□□□□□ -0.69
UBE2B-204ENST00000504431 COL25A1Q9BXS0 654 aaPredicted RBP10.74□□□□□ -0.69
UBE2B-204ENST00000504431 GSX2Q9BZM3 304 aa10.74□□□□□ -0.69
UBE2B-204ENST00000504431 USP20Q9Y2K6 914 aa10.74□□□□□ -0.69
UBE2B-204ENST00000504431 STRCP1A6NGW2 1772 aa10.74□□□□□ -0.69
UBE2B-204ENST00000504431 WFS1O76024 890 aa10.73□□□□□ -0.69
UBE2B-204ENST00000504431 GRNP28799 593 aaKnown RBP10.73□□□□□ -0.69
UBE2B-204ENST00000504431 GAS6Q14393 721 aa10.73□□□□□ -0.69
UBE2B-204ENST00000504431 TRIP4Q15650 581 aaPredicted RBP10.73□□□□□ -0.69
UBE2B-204ENST00000504431 XKR5Q6UX68 686 aa10.73□□□□□ -0.69
UBE2B-204ENST00000504431 NLRP13Q86W25 1043 aa10.73□□□□□ -0.69
UBE2B-204ENST00000504431 GPR161Q8N6U8 529 aaKnown RBP10.73□□□□□ -0.69
UBE2B-204ENST00000504431 DHX57Q6P158 1386 aaKnown RBP10.73□□□□□ -0.69
UBE2B-204ENST00000504431 NEXMIFQ5QGS0 1516 aa10.73□□□□□ -0.69
UBE2B-204ENST00000504431 CTBSQ01459 385 aa10.72□□□□□ -0.69
UBE2B-204ENST00000504431 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.72□□□□□ -0.69
UBE2B-204ENST00000504431 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.72□□□□□ -0.69
UBE2B-204ENST00000504431 ERBB4Q15303 1308 aa10.72□□□□□ -0.69
UBE2B-204ENST00000504431 ADGRF5Q8IZF2 1346 aa10.72□□□□□ -0.69
UBE2B-204ENST00000504431 SPATA31E1Q6ZUB1 1445 aa10.72□□□□□ -0.69
UBE2B-204ENST00000504431 LTBP4Q8N2S1 1624 aa10.72□□□□□ -0.69
UBE2B-204ENST00000504431 PPLO60437 1756 aa10.71□□□□□ -0.69
UBE2B-204ENST00000504431 ZNF468Q5VIY5 522 aaPredicted RBP10.71□□□□□ -0.69
UBE2B-204ENST00000504431 PLEKHG1Q9ULL1 1385 aa10.71□□□□□ -0.69
UBE2B-204ENST00000504431 ADAMTS13Q76LX8 1427 aa10.7□□□□□ -0.7
UBE2B-204ENST00000504431 RARAP10276 462 aa10.7□□□□□ -0.7
UBE2B-204ENST00000504431 ARAFP10398 606 aa10.7□□□□□ -0.7
UBE2B-204ENST00000504431 SRSF11Q05519 484 aaKnown RBP10.7□□□□□ -0.7
UBE2B-204ENST00000504431 TMC7Q7Z402 723 aa10.7□□□□□ -0.7
UBE2B-204ENST00000504431 BHMTQ93088 406 aa10.7□□□□□ -0.7
UBE2B-204ENST00000504431 ALKBH8Q96BT7 664 aaKnown RBP10.7□□□□□ -0.7
UBE2B-204ENST00000504431 SLC30A3Q99726 388 aa10.7□□□□□ -0.7
UBE2B-204ENST00000504431 GGNBP2Q9H3C7 697 aa10.7□□□□□ -0.7
UBE2B-204ENST00000504431 NRXN3Q9Y4C0 1643 aa10.69□□□□□ -0.7
UBE2B-204ENST00000504431 MAP3K6O95382 1288 aa10.69□□□□□ -0.7
UBE2B-204ENST00000504431 NFKB1P19838 968 aa10.69□□□□□ -0.7
UBE2B-204ENST00000504431 TTC39BQ5VTQ0 682 aaPredicted RBP10.69□□□□□ -0.7
UBE2B-204ENST00000504431 DCAF11Q8TEB1 546 aa10.69□□□□□ -0.7
UBE2B-204ENST00000504431 SNX29Q8TEQ0 813 aa10.69□□□□□ -0.7
UBE2B-204ENST00000504431 ZNF775Q96BV0 537 aaPredicted RBP10.69□□□□□ -0.7
UBE2B-204ENST00000504431 ELP3Q9H9T3 547 aa10.69□□□□□ -0.7
UBE2B-204ENST00000504431 ABI2Q9NYB9 513 aaPredicted RBP10.69□□□□□ -0.7
UBE2B-204ENST00000504431 METP08581 1390 aa10.68□□□□□ -0.7
UBE2B-204ENST00000504431 RPGRIP1LQ68CZ1 1315 aa10.68□□□□□ -0.7
UBE2B-204ENST00000504431 SIN3BO75182 1162 aa10.68□□□□□ -0.7
UBE2B-204ENST00000504431 SASH3O75995 380 aa10.68□□□□□ -0.7
UBE2B-204ENST00000504431 ADH6P28332 368 aa10.68□□□□□ -0.7
UBE2B-204ENST00000504431 PCSK7Q16549 785 aa10.68□□□□□ -0.7
UBE2B-204ENST00000504431 TMEM132EQ6IEE7 984 aa10.68□□□□□ -0.7
UBE2B-204ENST00000504431 KRT25Q7Z3Z0 450 aa10.68□□□□□ -0.7
UBE2B-204ENST00000504431 PMEPA1Q969W9 287 aa10.68□□□□□ -0.7
UBE2B-204ENST00000504431 GDF2Q9UK05 429 aaPredicted RBP10.68□□□□□ -0.7
UBE2B-204ENST00000504431 HCN2Q9UL51 889 aa10.68□□□□□ -0.7
UBE2B-204ENST00000504431 IFT172Q9UG01 1749 aa10.67□□□□□ -0.7
UBE2B-204ENST00000504431 KCNA6P17658 529 aa10.67□□□□□ -0.7
UBE2B-204ENST00000504431 COL19A1Q14993 1142 aa10.67□□□□□ -0.7
UBE2B-204ENST00000504431 TREML4Q6UXN2 200 aa10.67□□□□□ -0.7
UBE2B-204ENST00000504431 SYT9Q86SS6 491 aa10.67□□□□□ -0.7
UBE2B-204ENST00000504431 GOLGA6L1Q8N7Z2 621 aa10.67□□□□□ -0.7
UBE2B-204ENST00000504431 TBX22Q9Y458 520 aa10.67□□□□□ -0.7
UBE2B-204ENST00000504431 PTPRUQ92729 1446 aa10.67□□□□□ -0.7
UBE2B-204ENST00000504431 C2CD2LO14523 706 aa10.66□□□□□ -0.7
UBE2B-204ENST00000504431 GPR182O15218 404 aa10.66□□□□□ -0.7
UBE2B-204ENST00000504431 TREHO43280 583 aa10.66□□□□□ -0.7
UBE2B-204ENST00000504431 PSAPP07602 524 aa10.66□□□□□ -0.7
UBE2B-204ENST00000504431 SOX18P35713 384 aa10.66□□□□□ -0.7
UBE2B-204ENST00000504431 RNFT1Q5M7Z0 435 aa10.66□□□□□ -0.7
UBE2B-204ENST00000504431 DNAJC14Q6Y2X3 702 aaPredicted RBP10.66□□□□□ -0.7
UBE2B-204ENST00000504431 CNTNAP3BQ96NU0 1288 aa10.66□□□□□ -0.7
UBE2B-204ENST00000504431 CNTNAP3Q9BZ76 1288 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms