RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 CEMIPQ8WUJ3 1361 aa20.61■□□□□ 0.89
POLR2J3-209ENST00000504157 FCHSD1Q86WN1 690 aa20.61■□□□□ 0.89
POLR2J3-209ENST00000504157 HNRNPLLQ8WVV9 542 aaKnown RBP20.61■□□□□ 0.89
POLR2J3-209ENST00000504157 CXorf56Q9H5V9 222 aa20.61■□□□□ 0.89
POLR2J3-209ENST00000504157 DONSONQ9NYP3 566 aa20.61■□□□□ 0.89
POLR2J3-209ENST00000504157 ROBO2Q9HCK4 1378 aa20.61■□□□□ 0.89
POLR2J3-209ENST00000504157 ABCC6O95255 1503 aa20.61■□□□□ 0.89
POLR2J3-209ENST00000504157 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.6■□□□□ 0.89
POLR2J3-209ENST00000504157 NUTM2FA1L443 756 aa20.6■□□□□ 0.89
POLR2J3-209ENST00000504157 TAF5LO75529 589 aa20.6■□□□□ 0.89
POLR2J3-209ENST00000504157 PPP2R3AQ06190 1150 aa20.6■□□□□ 0.89
POLR2J3-209ENST00000504157 NUTM2GQ5VZR2 741 aa20.6■□□□□ 0.89
POLR2J3-209ENST00000504157 EFCAB13Q8IY85 973 aa20.6■□□□□ 0.89
POLR2J3-209ENST00000504157 BANK1Q8NDB2 785 aa20.6■□□□□ 0.89
POLR2J3-209ENST00000504157 MRFAP1Q9Y605 127 aa20.6■□□□□ 0.89
POLR2J3-209ENST00000504157 A0A087WWV3 80 aa20.59■□□□□ 0.89
POLR2J3-209ENST00000504157 TXLNAP40222 546 aa20.59■□□□□ 0.89
POLR2J3-209ENST00000504157 MRC1P22897 1456 aa20.59■□□□□ 0.89
POLR2J3-209ENST00000504157 RFX7Q2KHR2 1363 aa20.59■□□□□ 0.89
POLR2J3-209ENST00000504157 AMPHP49418 695 aa20.59■□□□□ 0.89
POLR2J3-209ENST00000504157 GNL2Q13823 731 aaKnown RBP20.59■□□□□ 0.89
POLR2J3-209ENST00000504157 GOLGA1Q92805 767 aa20.59■□□□□ 0.89
POLR2J3-209ENST00000504157 NEK1Q96PY6 1258 aa20.59■□□□□ 0.89
POLR2J3-209ENST00000504157 TBX22Q9Y458 520 aa20.59■□□□□ 0.89
POLR2J3-209ENST00000504157 NCAPD2Q15021 1401 aa20.59■□□□□ 0.89
POLR2J3-209ENST00000504157 ZSCAN12O43309 604 aa20.58■□□□□ 0.89
POLR2J3-209ENST00000504157 PFKFB2O60825 505 aa20.58■□□□□ 0.89
POLR2J3-209ENST00000504157 EIF4A1P60842 406 aaKnown RBP20.58■□□□□ 0.89
POLR2J3-209ENST00000504157 FSD1Q9BTV5 496 aa20.58■□□□□ 0.89
POLR2J3-209ENST00000504157 PDE11AQ9HCR9 933 aa20.58■□□□□ 0.89
POLR2J3-209ENST00000504157 FMR1NBQ8N0W7 255 aaPredicted RBP20.58■□□□□ 0.88
POLR2J3-209ENST00000504157 DDX11Q96FC9 970 aa20.58■□□□□ 0.88
POLR2J3-209ENST00000504157 CHPF2Q9P2E5 772 aa20.58■□□□□ 0.88
POLR2J3-209ENST00000504157 KDM3BQ7LBC6 1761 aa20.57■□□□□ 0.88
POLR2J3-209ENST00000504157 A0A1W2PQ27 194 aa20.57■□□□□ 0.88
POLR2J3-209ENST00000504157 A0A1W2PQ64 194 aa20.57■□□□□ 0.88
POLR2J3-209ENST00000504157 A0A1W2PQD8 194 aa20.57■□□□□ 0.88
POLR2J3-209ENST00000504157 E2F4Q16254 413 aa20.57■□□□□ 0.88
POLR2J3-209ENST00000504157 FSIP1Q8NA03 581 aa20.57■□□□□ 0.88
POLR2J3-209ENST00000504157 EAF2Q96CJ1 260 aaPredicted RBP20.57■□□□□ 0.88
POLR2J3-209ENST00000504157 VWA3AA6NCI4 1184 aa20.57■□□□□ 0.88
POLR2J3-209ENST00000504157 KIF1CO43896 1103 aaKnown RBP20.57■□□□□ 0.88
POLR2J3-209ENST00000504157 LRRC31Q6UY01 552 aa20.57■□□□□ 0.88
POLR2J3-209ENST00000504157 HDXQ7Z353 690 aa20.57■□□□□ 0.88
POLR2J3-209ENST00000504157 ZNF589Q86UQ0 364 aaPredicted RBP20.57■□□□□ 0.88
POLR2J3-209ENST00000504157 USP28Q96RU2 1077 aa20.57■□□□□ 0.88
POLR2J3-209ENST00000504157 SASH1O94885 1247 aa20.56■□□□□ 0.88
POLR2J3-209ENST00000504157 SCRN1Q12765 414 aa20.56■□□□□ 0.88
POLR2J3-209ENST00000504157 ZRSR1Q15695 479 aaKnown RBP20.56■□□□□ 0.88
POLR2J3-209ENST00000504157 BEND6Q5SZJ8 279 aaPredicted RBP20.56■□□□□ 0.88
POLR2J3-209ENST00000504157 NSUN7Q8NE18 718 aaKnown RBP20.56■□□□□ 0.88
POLR2J3-209ENST00000504157 MRPS27Q92552 414 aaKnown RBP20.56■□□□□ 0.88
POLR2J3-209ENST00000504157 PA2G4Q9UQ80 394 aaKnown RBP20.56■□□□□ 0.88
POLR2J3-209ENST00000504157 Q6ZUG5 572 aa20.55■□□□□ 0.88
POLR2J3-209ENST00000504157 EIF3JO75822 258 aaKnown RBP20.55■□□□□ 0.88
POLR2J3-209ENST00000504157 USP5P45974 858 aa20.55■□□□□ 0.88
POLR2J3-209ENST00000504157 TADA2BQ86TJ2 420 aa20.55■□□□□ 0.88
POLR2J3-209ENST00000504157 KIAA1468Q9P260 1216 aa20.55■□□□□ 0.88
POLR2J3-209ENST00000504157 AKAP2Q9Y2D5 859 aa20.55■□□□□ 0.88
POLR2J3-209ENST00000504157 U3KPZ7 1027 aaPredicted RBP20.55■□□□□ 0.88
POLR2J3-209ENST00000504157 UTYO14607 1347 aa20.55■□□□□ 0.88
POLR2J3-209ENST00000504157 A0A087WUV0 522 aaPredicted RBP20.54■□□□□ 0.88
POLR2J3-209ENST00000504157 GOLGA6L9A6NEM1 432 aa20.54■□□□□ 0.88
POLR2J3-209ENST00000504157 CEBPZQ03701 1054 aaKnown RBP20.54■□□□□ 0.88
POLR2J3-209ENST00000504157 NBPF6Q5VWK0 638 aa20.54■□□□□ 0.88
POLR2J3-209ENST00000504157 NBPF4Q96M43 638 aa20.54■□□□□ 0.88
POLR2J3-209ENST00000504157 ADALQ6DHV7 355 aa20.54■□□□□ 0.88
POLR2J3-209ENST00000504157 WDR24Q96S15 920 aa20.54■□□□□ 0.88
POLR2J3-209ENST00000504157 FAN1Q9Y2M0 1017 aa20.54■□□□□ 0.88
POLR2J3-209ENST00000504157 SALL1Q9NSC2 1324 aa20.53■□□□□ 0.88
POLR2J3-209ENST00000504157 HMGB1P09429 215 aaKnown RBP20.53■□□□□ 0.88
POLR2J3-209ENST00000504157 HSP90B1P14625 803 aaKnown RBP20.53■□□□□ 0.88
POLR2J3-209ENST00000504157 EIF2S2P20042 333 aaKnown RBP20.53■□□□□ 0.88
POLR2J3-209ENST00000504157 G3BP1Q13283 466 aaKnown RBP eCLIP20.53■□□□□ 0.88
POLR2J3-209ENST00000504157 UTP14AQ9BVJ6 771 aaKnown RBP20.53■□□□□ 0.88
POLR2J3-209ENST00000504157 MED4Q9NPJ6 270 aa20.53■□□□□ 0.88
POLR2J3-209ENST00000504157 C9orf78Q9NZ63 289 aaPredicted RBP20.53■□□□□ 0.88
POLR2J3-209ENST00000504157 PPFIA4O75335 1185 aa20.53■□□□□ 0.88
POLR2J3-209ENST00000504157 KIFC2Q96AC6 838 aa20.53■□□□□ 0.88
POLR2J3-209ENST00000504157 FTOQ9C0B1 505 aaKnown RBP eCLIP20.53■□□□□ 0.88
POLR2J3-209ENST00000504157 RTEL1Q9NZ71 1219 aa20.53■□□□□ 0.88
POLR2J3-209ENST00000504157 RAB21Q9UL25 225 aa20.53■□□□□ 0.88
POLR2J3-209ENST00000504157 PPP2R2CQ9Y2T4 447 aa20.53■□□□□ 0.88
POLR2J3-209ENST00000504157 NEDD4P46934 1319 aa20.52■□□□□ 0.88
POLR2J3-209ENST00000504157 IKBKBO14920 756 aa20.52■□□□□ 0.88
POLR2J3-209ENST00000504157 ME1P48163 572 aa20.52■□□□□ 0.88
POLR2J3-209ENST00000504157 MCM6Q14566 821 aa20.52■□□□□ 0.88
POLR2J3-209ENST00000504157 DPCR1Q3MIW9 517 aa20.52■□□□□ 0.88
POLR2J3-209ENST00000504157 PIK3C2AO00443 1686 aa20.52■□□□□ 0.88
POLR2J3-209ENST00000504157 COL15A1P39059 1388 aa20.52■□□□□ 0.87
POLR2J3-209ENST00000504157 POTEB2H3BUK9 544 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 MAP2K2P36507 400 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 ATP6V1AP38606 617 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 GNG11P61952 73 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 NCAPHQ15003 741 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 FAM71BQ8TC56 605 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 SDF4Q9BRK5 362 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 AGXT2Q9BYV1 514 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 BOLA2Q9H3K6 86 aa20.51■□□□□ 0.87
POLR2J3-209ENST00000504157 L1RE1Q9UN81 338 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms