RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 NRXN2Q9P2S2 1712 aa11.32□□□□□ -0.6
ARHGEF28-206ENST00000504003 SPDYE16A6NNV3 312 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF28-206ENST00000504003 APBB1O00213 710 aa11.32□□□□□ -0.6
ARHGEF28-206ENST00000504003 MAP3K7O43318 606 aa11.32□□□□□ -0.6
ARHGEF28-206ENST00000504003 PTPN12Q05209 780 aaKnown RBP11.32□□□□□ -0.6
ARHGEF28-206ENST00000504003 CEP126Q9P2H0 1117 aa11.32□□□□□ -0.6
ARHGEF28-206ENST00000504003 SEPT9Q9UHD8 586 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF28-206ENST00000504003 ABCC12Q96J65 1359 aa11.31□□□□□ -0.6
ARHGEF28-206ENST00000504003 ZBTB7AO95365 584 aa11.31□□□□□ -0.6
ARHGEF28-206ENST00000504003 IFIT2P09913 472 aaKnown RBP11.31□□□□□ -0.6
ARHGEF28-206ENST00000504003 NPR1P16066 1061 aa11.31□□□□□ -0.6
ARHGEF28-206ENST00000504003 RFX5P48382 616 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF28-206ENST00000504003 RPS8P62241 208 aaKnown RBP11.31□□□□□ -0.6
ARHGEF28-206ENST00000504003 RHPN1Q8TCX5 695 aa11.31□□□□□ -0.6
ARHGEF28-206ENST00000504003 PA2G4Q9UQ80 394 aaKnown RBP11.31□□□□□ -0.6
ARHGEF28-206ENST00000504003 CASZ1Q86V15 1759 aa11.31□□□□□ -0.6
ARHGEF28-206ENST00000504003 KLRG2A4D1S0 409 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF28-206ENST00000504003 BBOX1O75936 387 aa11.3□□□□□ -0.6
ARHGEF28-206ENST00000504003 GRAPQ13588 217 aa11.3□□□□□ -0.6
ARHGEF28-206ENST00000504003 CRY2Q49AN0 593 aa11.3□□□□□ -0.6
ARHGEF28-206ENST00000504003 METTL24Q5JXM2 366 aa11.3□□□□□ -0.6
ARHGEF28-206ENST00000504003 CCDC24Q8N4L8 307 aa11.3□□□□□ -0.6
ARHGEF28-206ENST00000504003 GRAPLQ8TC17 118 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF28-206ENST00000504003 MASTLQ96GX5 879 aa11.3□□□□□ -0.6
ARHGEF28-206ENST00000504003 LRCH3Q96II8 777 aa11.3□□□□□ -0.6
ARHGEF28-206ENST00000504003 CRAMP1Q96RY5 1269 aa11.3□□□□□ -0.6
ARHGEF28-206ENST00000504003 IRX2Q9BZI1 471 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF28-206ENST00000504003 ANKRD2Q9GZV1 360 aa11.3□□□□□ -0.6
ARHGEF28-206ENST00000504003 SPON1Q9HCB6 807 aa11.3□□□□□ -0.6
ARHGEF28-206ENST00000504003 BSDC1Q9NW68 430 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF28-206ENST00000504003 HOXA10P31260 410 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF28-206ENST00000504003 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
ARHGEF28-206ENST00000504003 C2CD5Q86YS7 1000 aa11.29□□□□□ -0.6
ARHGEF28-206ENST00000504003 KLHDC4Q8TBB5 520 aa11.29□□□□□ -0.6
ARHGEF28-206ENST00000504003 CNKSR1Q969H4 720 aa11.29□□□□□ -0.6
ARHGEF28-206ENST00000504003 ZNF594Q96JF6 807 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF28-206ENST00000504003 LNPKQ9C0E8 428 aa11.29□□□□□ -0.6
ARHGEF28-206ENST00000504003 BCL11AQ9H165 835 aa11.29□□□□□ -0.6
ARHGEF28-206ENST00000504003 GPR108Q9NPR9 543 aa11.29□□□□□ -0.6
ARHGEF28-206ENST00000504003 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF28-206ENST00000504003 ERC2O15083 957 aa11.28□□□□□ -0.6
ARHGEF28-206ENST00000504003 KCNJ4P48050 445 aa11.28□□□□□ -0.6
ARHGEF28-206ENST00000504003 TGFB2P61812 414 aa11.28□□□□□ -0.6
ARHGEF28-206ENST00000504003 GORABQ5T7V8 394 aa11.28□□□□□ -0.6
ARHGEF28-206ENST00000504003 STYK1Q6J9G0 422 aa11.28□□□□□ -0.6
ARHGEF28-206ENST00000504003 SEC31BQ9NQW1 1179 aa11.28□□□□□ -0.6
ARHGEF28-206ENST00000504003 LRP5O75197 1615 aa11.27□□□□□ -0.6
ARHGEF28-206ENST00000504003 IFIT1P09914 478 aaKnown RBP11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 SRGNP10124 158 aa11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 SLC5A1P13866 664 aa11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 RGS3P49796 1198 aa11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 TFCP2Q12800 502 aa11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 PUM3Q15397 648 aaKnown RBP11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 GRIPAP1Q4V328 841 aa11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 AACSQ86V21 672 aa11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 ZNF622Q969S3 477 aaKnown RBP eCLIP11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 NEUROD6Q96NK8 337 aa11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 PDGFDQ9GZP0 370 aaPredicted RBP11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 IL1RAPL2Q9NP60 686 aa11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 WDR70Q9NW82 654 aa11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 WBP1LQ9NX94 342 aa11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 TSR3Q9UJK0 312 aaKnown RBP11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 RIPOR2Q9Y4F9 1068 aa11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.61
ARHGEF28-206ENST00000504003 SPEF2Q9C093 1822 aa11.26□□□□□ -0.61
ARHGEF28-206ENST00000504003 PPEF1O14829 653 aaPredicted RBP11.26□□□□□ -0.61
ARHGEF28-206ENST00000504003 SASH1O94885 1247 aa11.26□□□□□ -0.61
ARHGEF28-206ENST00000504003 PDE8BO95263 885 aa11.26□□□□□ -0.61
ARHGEF28-206ENST00000504003 LRRC24Q50LG9 513 aa11.26□□□□□ -0.61
ARHGEF28-206ENST00000504003 CCDC158Q5M9N0 1113 aa11.26□□□□□ -0.61
ARHGEF28-206ENST00000504003 CC2D2BQ6DHV5 1058 aa11.26□□□□□ -0.61
ARHGEF28-206ENST00000504003 ATG9AQ7Z3C6 839 aa11.26□□□□□ -0.61
ARHGEF28-206ENST00000504003 LPIN2Q92539 896 aa11.26□□□□□ -0.61
ARHGEF28-206ENST00000504003 ANKIB1Q9P2G1 1089 aa11.26□□□□□ -0.61
ARHGEF28-206ENST00000504003 CD2APQ9Y5K6 639 aa11.26□□□□□ -0.61
ARHGEF28-206ENST00000504003 TTC41PQ6P2S7 1318 aa11.26□□□□□ -0.61
ARHGEF28-206ENST00000504003 C10orf71Q711Q0 1435 aa11.26□□□□□ -0.61
ARHGEF28-206ENST00000504003 ANKRD31Q8N7Z5 1873 aa11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 SMARCA5O60264 1052 aaPredicted RBP11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 EIF5BO60841 1220 aaKnown RBP11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 MX1P20591 662 aa11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 KCNC4Q03721 635 aa11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 CHRNDQ07001 517 aa11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 E2F4Q16254 413 aa11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 ATP2B3Q16720 1220 aa11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 TNNI3KQ59H18 835 aa11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 SOGA3Q5TF21 947 aa11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 SP8Q8IXZ3 490 aa11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 CELF1Q92879 486 aaKnown RBP11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 PUS3Q9BZE2 481 aaKnown RBP11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 PPP1R1BQ9UD71 204 aaPredicted RBP11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 HPS5Q9UPZ3 1129 aa11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 FPGT-TNNI3KV9GXZ4 949 aa11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 AOX1Q06278 1338 aa11.25□□□□□ -0.61
ARHGEF28-206ENST00000504003 A0A1B0GUL7 405 aa11.24□□□□□ -0.61
ARHGEF28-206ENST00000504003 UBE4AQ14139 1066 aa11.24□□□□□ -0.61
ARHGEF28-206ENST00000504003 TSR1Q2NL82 804 aaKnown RBP11.24□□□□□ -0.61
ARHGEF28-206ENST00000504003 CAVIN4Q5BKX8 364 aa11.24□□□□□ -0.61
ARHGEF28-206ENST00000504003 VPS37DQ86XT2 251 aa11.24□□□□□ -0.61
ARHGEF28-206ENST00000504003 TTLL6Q8N841 843 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms