RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 CXXC1Q9P0U4 656 aaPredicted RBP8.37□□□□□ -1.07
UBE3D-205ENST00000503942 TMEM63CQ9P1W3 806 aa8.37□□□□□ -1.07
UBE3D-205ENST00000503942 STIM2Q9P246 746 aa8.37□□□□□ -1.07
UBE3D-205ENST00000503942 NFKBIEO00221 500 aa8.36□□□□□ -1.07
UBE3D-205ENST00000503942 NAA30Q147X3 362 aaPredicted RBP8.36□□□□□ -1.07
UBE3D-205ENST00000503942 POU5F2Q8N7G0 328 aa8.36□□□□□ -1.07
UBE3D-205ENST00000503942 ABTB2Q8N961 1025 aa8.36□□□□□ -1.07
UBE3D-205ENST00000503942 SLC7A3Q8WY07 619 aa8.36□□□□□ -1.07
UBE3D-205ENST00000503942 FBXL18Q96ME1 805 aa8.36□□□□□ -1.07
UBE3D-205ENST00000503942 OSBPL1AQ9BXW6 950 aa8.36□□□□□ -1.07
UBE3D-205ENST00000503942 SALL4Q9UJQ4 1053 aa8.36□□□□□ -1.07
UBE3D-205ENST00000503942 SOX13Q9UN79 622 aa8.36□□□□□ -1.07
UBE3D-205ENST00000503942 TIAF1O95411 115 aa8.35□□□□□ -1.07
UBE3D-205ENST00000503942 ACPPP15309 386 aa8.35□□□□□ -1.07
UBE3D-205ENST00000503942 ITGB5P18084 799 aa8.35□□□□□ -1.07
UBE3D-205ENST00000503942 C19orf57Q0VDD7 668 aa8.35□□□□□ -1.07
UBE3D-205ENST00000503942 ELOAQ14241 798 aaKnown RBP8.35□□□□□ -1.07
UBE3D-205ENST00000503942 ASIC4Q96FT7 647 aa8.35□□□□□ -1.07
UBE3D-205ENST00000503942 KRTAP4-9Q9BYQ8 210 aa8.35□□□□□ -1.07
UBE3D-205ENST00000503942 DZANK1Q9NVP4 752 aa8.35□□□□□ -1.07
UBE3D-205ENST00000503942 CNTN3Q9P232 1028 aa8.35□□□□□ -1.07
UBE3D-205ENST00000503942 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.35□□□□□ -1.07
UBE3D-205ENST00000503942 PDE2AO00408 941 aaPredicted RBP8.34□□□□□ -1.07
UBE3D-205ENST00000503942 C8AP07357 584 aa8.34□□□□□ -1.07
UBE3D-205ENST00000503942 RXRBP28702 533 aa8.34□□□□□ -1.07
UBE3D-205ENST00000503942 SRPK2P78362 688 aaKnown RBP8.34□□□□□ -1.07
UBE3D-205ENST00000503942 NUTM2GQ5VZR2 741 aa8.34□□□□□ -1.07
UBE3D-205ENST00000503942 ZNF438Q7Z4V0 828 aa8.34□□□□□ -1.07
UBE3D-205ENST00000503942 SMG8Q8ND04 991 aaKnown RBP8.34□□□□□ -1.07
UBE3D-205ENST00000503942 STK32AQ8WU08 396 aa8.34□□□□□ -1.07
UBE3D-205ENST00000503942 TMPRSS13Q9BYE2 586 aa8.34□□□□□ -1.07
UBE3D-205ENST00000503942 SUGCTQ9HAC7 445 aa8.34□□□□□ -1.07
UBE3D-205ENST00000503942 ARL4DP49703 201 aa8.33□□□□□ -1.08
UBE3D-205ENST00000503942 HGSNATQ68CP4 663 aa8.33□□□□□ -1.08
UBE3D-205ENST00000503942 C12orf50Q8NA57 414 aaPredicted RBP8.33□□□□□ -1.08
UBE3D-205ENST00000503942 NUDT16Q96DE0 195 aaKnown RBP8.33□□□□□ -1.08
UBE3D-205ENST00000503942 HHIPQ96QV1 700 aa8.33□□□□□ -1.08
UBE3D-205ENST00000503942 METTL22Q9BUU2 404 aaPredicted RBP8.33□□□□□ -1.08
UBE3D-205ENST00000503942 FAM95CA0A1B0GW59 222 aa8.32□□□□□ -1.08
UBE3D-205ENST00000503942 JUNBP17275 347 aaPredicted RBP8.31□□□□□ -1.08
UBE3D-205ENST00000503942 CES1P23141 567 aa8.31□□□□□ -1.08
UBE3D-205ENST00000503942 COL19A1Q14993 1142 aa8.31□□□□□ -1.08
UBE3D-205ENST00000503942 PAOXQ6QHF9 649 aa8.31□□□□□ -1.08
UBE3D-205ENST00000503942 TP53INP2Q8IXH6 220 aa8.31□□□□□ -1.08
UBE3D-205ENST00000503942 SHISA5Q8N114 240 aa8.31□□□□□ -1.08
UBE3D-205ENST00000503942 C1orf127Q8N9H9 656 aa8.31□□□□□ -1.08
UBE3D-205ENST00000503942 CYP4F12Q9HCS2 524 aa8.31□□□□□ -1.08
UBE3D-205ENST00000503942 BSDC1Q9NW68 430 aaPredicted RBP8.31□□□□□ -1.08
UBE3D-205ENST00000503942 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.3□□□□□ -1.08
UBE3D-205ENST00000503942 LOC100289279A0A1B0GTE1 492 aa8.3□□□□□ -1.08
UBE3D-205ENST00000503942 PPP1R15AO75807 674 aaPredicted RBP8.3□□□□□ -1.08
UBE3D-205ENST00000503942 TMEM102Q8N9M5 508 aaPredicted RBP8.3□□□□□ -1.08
UBE3D-205ENST00000503942 TRPA1O75762 1119 aa8.29□□□□□ -1.08
UBE3D-205ENST00000503942 DLGAP3O95886 979 aa8.29□□□□□ -1.08
UBE3D-205ENST00000503942 RPLP1P05386 114 aaKnown RBP8.29□□□□□ -1.08
UBE3D-205ENST00000503942 XKR5Q6UX68 686 aa8.29□□□□□ -1.08
UBE3D-205ENST00000503942 VN1R5Q7Z5H4 357 aa8.29□□□□□ -1.08
UBE3D-205ENST00000503942 BSNDQ8WZ55 320 aa8.29□□□□□ -1.08
UBE3D-205ENST00000503942 USP26Q9BXU7 913 aa8.29□□□□□ -1.08
UBE3D-205ENST00000503942 SOX1O00570 391 aaPredicted RBP8.28□□□□□ -1.08
UBE3D-205ENST00000503942 CYP26A1O43174 497 aa8.28□□□□□ -1.08
UBE3D-205ENST00000503942 IKBKEQ14164 716 aa8.28□□□□□ -1.08
UBE3D-205ENST00000503942 NFKBIBQ15653 356 aa8.28□□□□□ -1.08
UBE3D-205ENST00000503942 CDPF1Q6NVV7 123 aa8.28□□□□□ -1.08
UBE3D-205ENST00000503942 ZAR1Q86SH2 424 aa8.28□□□□□ -1.08
UBE3D-205ENST00000503942 ATCAYQ86WG3 371 aa8.28□□□□□ -1.08
UBE3D-205ENST00000503942 FBLIM1Q8WUP2 373 aa8.28□□□□□ -1.08
UBE3D-205ENST00000503942 PBXIP1Q96AQ6 731 aa8.28□□□□□ -1.08
UBE3D-205ENST00000503942 SOX17Q9H6I2 414 aaPredicted RBP8.28□□□□□ -1.08
UBE3D-205ENST00000503942 ADMP35318 185 aa8.27□□□□□ -1.09
UBE3D-205ENST00000503942 USP11P51784 963 aa8.27□□□□□ -1.09
UBE3D-205ENST00000503942 C2CD4AQ8NCU7 369 aaPredicted RBP8.27□□□□□ -1.09
UBE3D-205ENST00000503942 AGBL5Q8NDL9 886 aa8.27□□□□□ -1.09
UBE3D-205ENST00000503942 CHRDQ9H2X0 955 aa8.27□□□□□ -1.09
UBE3D-205ENST00000503942 PAK6Q9NQU5 681 aaPredicted RBP8.27□□□□□ -1.09
UBE3D-205ENST00000503942 PRKAG2Q9UGJ0 569 aa8.27□□□□□ -1.09
UBE3D-205ENST00000503942 DRD2P14416 443 aa8.26□□□□□ -1.09
UBE3D-205ENST00000503942 FLCNQ8NFG4 579 aa8.26□□□□□ -1.09
UBE3D-205ENST00000503942 EZH1Q92800 747 aaPredicted RBP8.26□□□□□ -1.09
UBE3D-205ENST00000503942 NXPE3Q969Y0 559 aa8.26□□□□□ -1.09
UBE3D-205ENST00000503942 TBC1D32Q96NH3 1257 aa8.26□□□□□ -1.09
UBE3D-205ENST00000503942 TMEM164Q5U3C3 297 aa8.25□□□□□ -1.09
UBE3D-205ENST00000503942 RETREG2Q8NC44 543 aa8.25□□□□□ -1.09
UBE3D-205ENST00000503942 GATA6Q92908 595 aa8.25□□□□□ -1.09
UBE3D-205ENST00000503942 CLP1Q92989 425 aaKnown RBP8.25□□□□□ -1.09
UBE3D-205ENST00000503942 PMEPA1Q969W9 287 aa8.25□□□□□ -1.09
UBE3D-205ENST00000503942 OSMRQ99650 979 aa8.25□□□□□ -1.09
UBE3D-205ENST00000503942 ZKSCAN3Q9BRR0 538 aa8.25□□□□□ -1.09
UBE3D-205ENST00000503942 FAM170BA6NMN3 283 aa8.24□□□□□ -1.09
UBE3D-205ENST00000503942 EXOSC6Q5RKV6 272 aaKnown RBP8.24□□□□□ -1.09
UBE3D-205ENST00000503942 EDEM1Q92611 657 aa8.24□□□□□ -1.09
UBE3D-205ENST00000503942 YIPF2Q9BWQ6 316 aa8.24□□□□□ -1.09
UBE3D-205ENST00000503942 SOX4Q06945 474 aaPredicted RBP8.23□□□□□ -1.09
UBE3D-205ENST00000503942 GGNBP2Q9H3C7 697 aa8.23□□□□□ -1.09
UBE3D-205ENST00000503942 SEPT3Q9UH03 358 aa8.23□□□□□ -1.09
UBE3D-205ENST00000503942 PAPLNO95428 1278 aa8.22□□□□□ -1.09
UBE3D-205ENST00000503942 PDGFAP04085 211 aa8.22□□□□□ -1.09
UBE3D-205ENST00000503942 ESRRAP11474 423 aaPredicted RBP8.22□□□□□ -1.09
UBE3D-205ENST00000503942 PCSK2P16519 638 aa8.22□□□□□ -1.09
UBE3D-205ENST00000503942 KRTAP4-2Q9BYR5 136 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms