RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 CCDC152Q4G0S7 254 aa13.7□□□□□ -0.22
USP46-204ENST00000503060 LPIN2Q92539 896 aa13.7□□□□□ -0.22
USP46-204ENST00000503060 APPBP2Q92624 585 aa13.7□□□□□ -0.22
USP46-204ENST00000503060 GRPEL1Q9HAV7 217 aa13.7□□□□□ -0.22
USP46-204ENST00000503060 LAMB2P55268 1798 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 AKAP11Q9UKA4 1901 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 RRP9O43818 475 aaKnown RBP13.69□□□□□ -0.22
USP46-204ENST00000503060 F13A1P00488 732 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 Q6ZUG5 572 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 HELBQ8NG08 1087 aaPredicted RBP13.69□□□□□ -0.22
USP46-204ENST00000503060 SEC31BQ9NQW1 1179 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 DTNBO60941 627 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 MBD3O95983 291 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 UQCRFS1P1P0C7P4 283 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 ARID4AP29374 1257 aaPredicted RBP13.69□□□□□ -0.22
USP46-204ENST00000503060 PHKA1P46020 1223 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 CCDC102BQ68D86 513 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 CLEC4GQ6UXB4 293 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 MPHOSPH8Q99549 860 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 USP21Q9UK80 565 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 MTMR6Q9Y217 621 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 CNTNAP4Q9C0A0 1308 aa13.69□□□□□ -0.22
USP46-204ENST00000503060 ARAP2Q8WZ64 1704 aa13.68□□□□□ -0.22
USP46-204ENST00000503060 TTF1Q15361 905 aaPredicted RBP13.68□□□□□ -0.22
USP46-204ENST00000503060 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.68□□□□□ -0.22
USP46-204ENST00000503060 PRDM4Q9UKN5 801 aa13.68□□□□□ -0.22
USP46-204ENST00000503060 SPATA31A6Q5VVP1 1343 aa13.68□□□□□ -0.22
USP46-204ENST00000503060 A0A0G2JLW4 131 aa13.68□□□□□ -0.22
USP46-204ENST00000503060 MYH7P12883 1935 aa13.68□□□□□ -0.22
USP46-204ENST00000503060 SLC5A1P13866 664 aa13.68□□□□□ -0.22
USP46-204ENST00000503060 ZNF445P59923 1031 aa13.68□□□□□ -0.22
USP46-204ENST00000503060 ZSCAN23Q3MJ62 389 aa13.68□□□□□ -0.22
USP46-204ENST00000503060 ZSCAN25Q6NSZ9 544 aa13.68□□□□□ -0.22
USP46-204ENST00000503060 DHX32Q7L7V1 743 aaKnown RBP13.68□□□□□ -0.22
USP46-204ENST00000503060 PTF1AQ7RTS3 328 aa13.68□□□□□ -0.22
USP46-204ENST00000503060 LAMA4Q16363 1823 aa13.67□□□□□ -0.22
USP46-204ENST00000503060 E7EWF7 191 aa13.67□□□□□ -0.22
USP46-204ENST00000503060 FOXP2O15409 715 aa13.67□□□□□ -0.22
USP46-204ENST00000503060 KCNQ4P56696 695 aa13.67□□□□□ -0.22
USP46-204ENST00000503060 STK3Q13188 491 aa13.67□□□□□ -0.22
USP46-204ENST00000503060 TMEM87AQ8NBN3 555 aa13.67□□□□□ -0.22
USP46-204ENST00000503060 PUS7LQ9H0K6 701 aaKnown RBP13.67□□□□□ -0.22
USP46-204ENST00000503060 PIH1D3Q9NQM4 214 aaKnown RBP13.67□□□□□ -0.22
USP46-204ENST00000503060 CTNNA3Q9UI47 895 aa13.67□□□□□ -0.22
USP46-204ENST00000503060 NSFL1CQ9UNZ2 370 aaKnown RBP13.67□□□□□ -0.22
USP46-204ENST00000503060 ATP6V1DQ9Y5K8 247 aa13.67□□□□□ -0.22
USP46-204ENST00000503060 THSD7AQ9UPZ6 1657 aa13.67□□□□□ -0.22
USP46-204ENST00000503060 ADD2P35612 726 aa13.66□□□□□ -0.22
USP46-204ENST00000503060 IGHMBP2P38935 993 aaKnown RBP13.66□□□□□ -0.22
USP46-204ENST00000503060 TTLL5Q6EMB2 1281 aa13.66□□□□□ -0.22
USP46-204ENST00000503060 USP48Q86UV5 1035 aa13.66□□□□□ -0.22
USP46-204ENST00000503060 GTF3C6Q969F1 213 aa13.66□□□□□ -0.22
USP46-204ENST00000503060 RBM27Q9P2N5 1060 aaKnown RBP13.66□□□□□ -0.22
USP46-204ENST00000503060 EXOSC10Q01780 885 aaKnown RBP13.66□□□□□ -0.22
USP46-204ENST00000503060 LARP1BQ659C4 914 aaKnown RBP13.66□□□□□ -0.22
USP46-204ENST00000503060 CCDC82Q8N4S0 544 aa13.66□□□□□ -0.22
USP46-204ENST00000503060 BRF1Q92994 677 aa13.66□□□□□ -0.22
USP46-204ENST00000503060 LRRC2Q9BYS8 371 aa13.66□□□□□ -0.22
USP46-204ENST00000503060 PANK2Q9BZ23 570 aa13.66□□□□□ -0.22
USP46-204ENST00000503060 GDPD2Q9HCC8 539 aa13.66□□□□□ -0.22
USP46-204ENST00000503060 VPS37CA5D8V6 355 aaPredicted RBP13.65□□□□□ -0.22
USP46-204ENST00000503060 RGL2O15211 777 aa13.65□□□□□ -0.22
USP46-204ENST00000503060 GPAA1O43292 621 aa13.65□□□□□ -0.22
USP46-204ENST00000503060 PDCP20941 246 aa13.65□□□□□ -0.22
USP46-204ENST00000503060 RC3H1Q5TC82 1133 aaKnown RBP13.65□□□□□ -0.22
USP46-204ENST00000503060 CNPY2Q9Y2B0 182 aa13.65□□□□□ -0.22
USP46-204ENST00000503060 UBE3CQ15386 1083 aa13.65□□□□□ -0.22
USP46-204ENST00000503060 SLC9C2Q5TAH2 1124 aa13.65□□□□□ -0.22
USP46-204ENST00000503060 TMEM63CQ9P1W3 806 aa13.65□□□□□ -0.22
USP46-204ENST00000503060 ATRNO75882 1429 aa13.65□□□□□ -0.22
USP46-204ENST00000503060 BTAF1O14981 1849 aa13.65□□□□□ -0.22
USP46-204ENST00000503060 GADD45BO75293 160 aaPredicted RBP13.64□□□□□ -0.23
USP46-204ENST00000503060 IMMTQ16891 758 aaKnown RBP13.64□□□□□ -0.23
USP46-204ENST00000503060 ERFEQ4G0M1 354 aa13.64□□□□□ -0.23
USP46-204ENST00000503060 AGXT2Q9BYV1 514 aa13.64□□□□□ -0.23
USP46-204ENST00000503060 NHSQ6T4R5 1651 aa13.64□□□□□ -0.23
USP46-204ENST00000503060 SCN7AQ01118 1682 aa13.64□□□□□ -0.23
USP46-204ENST00000503060 SNAP23O00161 211 aa13.64□□□□□ -0.23
USP46-204ENST00000503060 PFKFB2O60825 505 aa13.64□□□□□ -0.23
USP46-204ENST00000503060 IDH1O75874 414 aaKnown RBP13.64□□□□□ -0.23
USP46-204ENST00000503060 FGAP02671 866 aa13.64□□□□□ -0.23
USP46-204ENST00000503060 RPS6KA4O75676 772 aa13.63□□□□□ -0.23
USP46-204ENST00000503060 PDE6AP16499 860 aa13.63□□□□□ -0.23
USP46-204ENST00000503060 SPATA5Q8NB90 893 aa13.63□□□□□ -0.23
USP46-204ENST00000503060 CDC5LQ99459 802 aaKnown RBP13.63□□□□□ -0.23
USP46-204ENST00000503060 BCL2L12Q9HB09 334 aa13.63□□□□□ -0.23
USP46-204ENST00000503060 ZNF532Q9HCE3 1301 aa13.63□□□□□ -0.23
USP46-204ENST00000503060 SF3B3Q15393 1217 aaKnown RBP13.63□□□□□ -0.23
USP46-204ENST00000503060 WWC3Q9ULE0 1092 aa13.63□□□□□ -0.23
USP46-204ENST00000503060 TCHHQ07283 1943 aa13.63□□□□□ -0.23
USP46-204ENST00000503060 JAK2O60674 1132 aa13.62□□□□□ -0.23
USP46-204ENST00000503060 HAND2P61296 217 aa13.62□□□□□ -0.23
USP46-204ENST00000503060 CHRNDQ07001 517 aa13.62□□□□□ -0.23
USP46-204ENST00000503060 APOBRQ0VD83 1088 aa13.62□□□□□ -0.23
USP46-204ENST00000503060 SCRN1Q12765 414 aa13.62□□□□□ -0.23
USP46-204ENST00000503060 RASGRF1Q13972 1273 aa13.62□□□□□ -0.23
USP46-204ENST00000503060 TBC1D9BQ66K14 1250 aa13.62□□□□□ -0.23
USP46-204ENST00000503060 C3orf67Q6ZVT6 689 aa13.62□□□□□ -0.23
USP46-204ENST00000503060 SMIM5Q71RC9 77 aa13.62□□□□□ -0.23
USP46-204ENST00000503060 NARFQ9UHQ1 456 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms