RNA–Protein interactions for RNA: ENST00000502969.1

SRPK1-206, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-206ENST00000502969 ITPKAP23677 461 aa7.7□□□□□ -1.18
SRPK1-206ENST00000502969 GRIA4P48058 902 aa7.7□□□□□ -1.18
SRPK1-206ENST00000502969 IKBKEQ14164 716 aa7.7□□□□□ -1.18
SRPK1-206ENST00000502969 RPS26P11Q5JNZ5 115 aaPredicted RBP7.7□□□□□ -1.18
SRPK1-206ENST00000502969 GLIS3Q8NEA6 775 aa7.7□□□□□ -1.18
SRPK1-206ENST00000502969 CEP44Q9C0F1 390 aa7.7□□□□□ -1.18
SRPK1-206ENST00000502969 METTL12A8MUP2 240 aa7.69□□□□□ -1.18
SRPK1-206ENST00000502969 ARHGEF15O94989 841 aa7.69□□□□□ -1.18
SRPK1-206ENST00000502969 HNRNPUQ00839 825 aaKnown RBP eCLIP7.69□□□□□ -1.18
SRPK1-206ENST00000502969 PPP2R3AQ06190 1150 aa7.69□□□□□ -1.18
SRPK1-206ENST00000502969 MRPL58Q14197 206 aaKnown RBP7.69□□□□□ -1.18
SRPK1-206ENST00000502969 TSNAXIP1Q2TAA8 658 aa7.69□□□□□ -1.18
SRPK1-206ENST00000502969 TRAPPC3LQ5T215 181 aa7.69□□□□□ -1.18
SRPK1-206ENST00000502969 C8orf86Q6ZUL3 223 aa7.69□□□□□ -1.18
SRPK1-206ENST00000502969 DTWD1Q8N5C7 304 aa7.69□□□□□ -1.18
SRPK1-206ENST00000502969 BEND7Q8N7W2 519 aaPredicted RBP7.69□□□□□ -1.18
SRPK1-206ENST00000502969 SOX13Q9UN79 622 aa7.69□□□□□ -1.18
SRPK1-206ENST00000502969 PIP4K2BP78356 416 aa7.68□□□□□ -1.18
SRPK1-206ENST00000502969 PCDH1Q08174 1060 aa7.68□□□□□ -1.18
SRPK1-206ENST00000502969 SPRED3Q2MJR0 410 aa7.68□□□□□ -1.18
SRPK1-206ENST00000502969 PRRT3Q5FWE3 981 aa7.68□□□□□ -1.18
SRPK1-206ENST00000502969 WNT8BQ93098 351 aa7.68□□□□□ -1.18
SRPK1-206ENST00000502969 ZNF428Q96B54 188 aa7.68□□□□□ -1.18
SRPK1-206ENST00000502969 SCARF2Q96GP6 870 aaPredicted RBP7.68□□□□□ -1.18
SRPK1-206ENST00000502969 ZNF576Q9H609 170 aa7.68□□□□□ -1.18
SRPK1-206ENST00000502969 GPN3Q9UHW5 284 aaPredicted RBP7.68□□□□□ -1.18
SRPK1-206ENST00000502969 EPHA1P21709 976 aa7.67□□□□□ -1.18
SRPK1-206ENST00000502969 CDC25BP30305 580 aa7.67□□□□□ -1.18
SRPK1-206ENST00000502969 ST13P50502 369 aaKnown RBP7.67□□□□□ -1.18
SRPK1-206ENST00000502969 GRIK5Q16478 980 aa7.67□□□□□ -1.18
SRPK1-206ENST00000502969 DMRTC2Q8IXT2 367 aaPredicted RBP7.67□□□□□ -1.18
SRPK1-206ENST00000502969 TMEM87AQ8NBN3 555 aa7.67□□□□□ -1.18
SRPK1-206ENST00000502969 SH2B1Q9NRF2 756 aaPredicted RBP7.67□□□□□ -1.18
SRPK1-206ENST00000502969 RNF19AQ9NV58 838 aa7.67□□□□□ -1.18
SRPK1-206ENST00000502969 SAMM50Q9Y512 469 aa7.67□□□□□ -1.18
SRPK1-206ENST00000502969 UNCXA6NJT0 531 aa7.66□□□□□ -1.18
SRPK1-206ENST00000502969 NID1P14543 1247 aa7.66□□□□□ -1.18
SRPK1-206ENST00000502969 TRIM28Q13263 835 aaKnown RBP7.66□□□□□ -1.18
SRPK1-206ENST00000502969 TAF1CQ15572 869 aaPredicted RBP7.66□□□□□ -1.18
SRPK1-206ENST00000502969 C3orf58Q8NDZ4 430 aa7.66□□□□□ -1.18
SRPK1-206ENST00000502969 SLC7A3Q8WY07 619 aa7.66□□□□□ -1.18
SRPK1-206ENST00000502969 SEC31BQ9NQW1 1179 aa7.66□□□□□ -1.18
SRPK1-206ENST00000502969 LINC01387J3KSC0 135 aa7.65□□□□□ -1.18
SRPK1-206ENST00000502969 RNF225M0QZC1 329 aaPredicted RBP7.65□□□□□ -1.18
SRPK1-206ENST00000502969 C19orf57Q0VDD7 668 aa7.65□□□□□ -1.18
SRPK1-206ENST00000502969 CCDC85BQ15834 202 aaPredicted RBP7.65□□□□□ -1.18
SRPK1-206ENST00000502969 DIEXFQ68CQ4 756 aaKnown RBP7.65□□□□□ -1.18
SRPK1-206ENST00000502969 TPTE2Q6XPS3 522 aa7.65□□□□□ -1.18
SRPK1-206ENST00000502969 VN1R5Q7Z5H4 357 aa7.65□□□□□ -1.18
SRPK1-206ENST00000502969 KLHL23Q8NBE8 558 aa7.65□□□□□ -1.18
SRPK1-206ENST00000502969 ANKRD24Q8TF21 1146 aa7.65□□□□□ -1.18
SRPK1-206ENST00000502969 PLVAPQ9BX97 442 aa7.65□□□□□ -1.18
SRPK1-206ENST00000502969 SOX17Q9H6I2 414 aaPredicted RBP7.65□□□□□ -1.18
SRPK1-206ENST00000502969 OSGEPQ9NPF4 335 aa7.65□□□□□ -1.18
SRPK1-206ENST00000502969 TMEM39AQ9NV64 488 aa7.65□□□□□ -1.18
SRPK1-206ENST00000502969 ADAMTS8Q9UP79 889 aa7.65□□□□□ -1.18
SRPK1-206ENST00000502969 SCAMP3O14828 347 aaKnown RBP7.64□□□□□ -1.19
SRPK1-206ENST00000502969 FSCN2O14926 492 aa7.64□□□□□ -1.19
SRPK1-206ENST00000502969 B3GALT4O96024 378 aa7.64□□□□□ -1.19
SRPK1-206ENST00000502969 ESRRAP11474 423 aaPredicted RBP7.64□□□□□ -1.19
SRPK1-206ENST00000502969 RLBP1P12271 317 aa7.64□□□□□ -1.19
SRPK1-206ENST00000502969 SNRPNP63162 240 aaKnown RBP7.64□□□□□ -1.19
SRPK1-206ENST00000502969 SV2BQ7L1I2 683 aa7.64□□□□□ -1.19
SRPK1-206ENST00000502969 LMNB1P20700 586 aa7.63□□□□□ -1.19
SRPK1-206ENST00000502969 RANGAP1P46060 587 aaPredicted RBP7.63□□□□□ -1.19
SRPK1-206ENST00000502969 BAG6P46379 1132 aa7.63□□□□□ -1.19
SRPK1-206ENST00000502969 GSTM4Q03013 218 aa7.63□□□□□ -1.19
SRPK1-206ENST00000502969 AP3B2Q13367 1082 aa7.63□□□□□ -1.19
SRPK1-206ENST00000502969 HP1BP3Q5SSJ5 553 aaPredicted RBP7.63□□□□□ -1.19
SRPK1-206ENST00000502969 TXNDC11Q6PKC3 985 aa7.63□□□□□ -1.19
SRPK1-206ENST00000502969 LINC00114Q6XXX2 140 aa7.63□□□□□ -1.19
SRPK1-206ENST00000502969 BACH2Q9BYV9 841 aa7.63□□□□□ -1.19
SRPK1-206ENST00000502969 METTL5Q9NRN9 209 aaKnown RBP7.63□□□□□ -1.19
SRPK1-206ENST00000502969 KIAA1522Q9P206 1035 aaPredicted RBP7.63□□□□□ -1.19
SRPK1-206ENST00000502969 USP31Q70CQ4 1352 aa7.62□□□□□ -1.19
SRPK1-206ENST00000502969 A0A0A0MRY4 1105 aa7.62□□□□□ -1.19
SRPK1-206ENST00000502969 CYP11A1P05108 521 aa7.62□□□□□ -1.19
SRPK1-206ENST00000502969 CTSHP09668 335 aa7.62□□□□□ -1.19
SRPK1-206ENST00000502969 HOXB4P17483 251 aaPredicted RBP7.62□□□□□ -1.19
SRPK1-206ENST00000502969 ZNF76P36508 570 aa7.62□□□□□ -1.19
SRPK1-206ENST00000502969 PWP1Q13610 501 aa7.62□□□□□ -1.19
SRPK1-206ENST00000502969 MEI1Q5TIA1 1274 aa7.62□□□□□ -1.19
SRPK1-206ENST00000502969 HS2ST1Q7LGA3 356 aa7.62□□□□□ -1.19
SRPK1-206ENST00000502969 ALYREFQ86V81 257 aaKnown RBP7.62□□□□□ -1.19
SRPK1-206ENST00000502969 FMR1NBQ8N0W7 255 aaPredicted RBP7.62□□□□□ -1.19
SRPK1-206ENST00000502969 FBXO24O75426 580 aa7.61□□□□□ -1.19
SRPK1-206ENST00000502969 RECKO95980 971 aa7.61□□□□□ -1.19
SRPK1-206ENST00000502969 ELNP15502 786 aa7.61□□□□□ -1.19
SRPK1-206ENST00000502969 SUZ12Q15022 739 aaKnown RBP7.61□□□□□ -1.19
SRPK1-206ENST00000502969 FBXO11Q86XK2 927 aa7.61□□□□□ -1.19
SRPK1-206ENST00000502969 TRIM11Q96F44 468 aa7.61□□□□□ -1.19
SRPK1-206ENST00000502969 CORO1BQ9BR76 489 aa7.61□□□□□ -1.19
SRPK1-206ENST00000502969 NOC4LQ9BVI4 516 aaKnown RBP7.61□□□□□ -1.19
SRPK1-206ENST00000502969 CARD10Q9BWT7 1032 aa7.61□□□□□ -1.19
SRPK1-206ENST00000502969 EMILIN2Q9BXX0 1053 aa7.61□□□□□ -1.19
SRPK1-206ENST00000502969 CNTNAP5Q8WYK1 1306 aa7.6□□□□□ -1.19
SRPK1-206ENST00000502969 SOX1O00570 391 aaPredicted RBP7.6□□□□□ -1.19
SRPK1-206ENST00000502969 SPATA31C1P0DKV0 1188 aa7.6□□□□□ -1.19
SRPK1-206ENST00000502969 TCF3P15923 654 aa7.6□□□□□ -1.19
SRPK1-206ENST00000502969 CD68P34810 354 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms