RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 CALD1Q05682 793 aaKnown RBP23.17■■□□□ 1.3
HERC6-204ENST00000502870 MPHOSPH8Q99549 860 aa23.17■■□□□ 1.3
HERC6-204ENST00000502870 CCDC30Q5VVM6 783 aa23.16■■□□□ 1.3
HERC6-204ENST00000502870 OTOFQ9HC10 1997 aa23.16■■□□□ 1.3
HERC6-204ENST00000502870 WDHD1O75717 1129 aaPredicted RBP23.15■■□□□ 1.3
HERC6-204ENST00000502870 GNAI1P63096 354 aa23.15■■□□□ 1.3
HERC6-204ENST00000502870 VEZTQ9HBM0 779 aa23.15■■□□□ 1.3
HERC6-204ENST00000502870 CD209Q9NNX6 404 aa23.15■■□□□ 1.3
HERC6-204ENST00000502870 IFT57Q9NWB7 429 aa23.15■■□□□ 1.3
HERC6-204ENST00000502870 SPDYE2BA6NHP3 402 aa23.14■■□□□ 1.29
HERC6-204ENST00000502870 ELL2O00472 640 aaPredicted RBP23.14■■□□□ 1.29
HERC6-204ENST00000502870 SPDYE6P0CI01 402 aa23.14■■□□□ 1.29
HERC6-204ENST00000502870 TNFAIP1Q13829 316 aa23.14■■□□□ 1.29
HERC6-204ENST00000502870 KSR2Q6VAB6 950 aa23.14■■□□□ 1.29
HERC6-204ENST00000502870 PTPN18Q99952 460 aa23.14■■□□□ 1.29
HERC6-204ENST00000502870 ZFYVE28Q9HCC9 887 aa23.14■■□□□ 1.29
HERC6-204ENST00000502870 CLRN2A0PK11 232 aa23.13■■□□□ 1.29
HERC6-204ENST00000502870 USP2O75604 605 aaPredicted RBP23.13■■□□□ 1.29
HERC6-204ENST00000502870 ZNF853P0CG23 659 aa23.13■■□□□ 1.29
HERC6-204ENST00000502870 KLRK1P26718 216 aa23.13■■□□□ 1.29
HERC6-204ENST00000502870 GJA5P36382 358 aa23.13■■□□□ 1.29
HERC6-204ENST00000502870 TAF1CQ15572 869 aaPredicted RBP23.13■■□□□ 1.29
HERC6-204ENST00000502870 CFAP100Q494V2 611 aa23.13■■□□□ 1.29
HERC6-204ENST00000502870 NBPF12Q5TAG4 269 aaPredicted RBP23.13■■□□□ 1.29
HERC6-204ENST00000502870 PTCH2Q9Y6C5 1203 aa23.13■■□□□ 1.29
HERC6-204ENST00000502870 H0YGN5 161 aa23.12■■□□□ 1.29
HERC6-204ENST00000502870 OPTNQ96CV9 577 aa23.12■■□□□ 1.29
HERC6-204ENST00000502870 PI4KAP2A4QPH2 592 aa23.11■■□□□ 1.29
HERC6-204ENST00000502870 IGKV5-2P06315 115 aa23.11■■□□□ 1.29
HERC6-204ENST00000502870 ITGA6P23229 1130 aa23.11■■□□□ 1.29
HERC6-204ENST00000502870 FKBP1AP62942 108 aaKnown RBP23.11■■□□□ 1.29
HERC6-204ENST00000502870 KIF22Q14807 665 aa23.11■■□□□ 1.29
HERC6-204ENST00000502870 UBE3BQ7Z3V4 1068 aa23.11■■□□□ 1.29
HERC6-204ENST00000502870 CERS5Q8N5B7 392 aa23.11■■□□□ 1.29
HERC6-204ENST00000502870 PI4KAP1Q8N8J0 262 aa23.11■■□□□ 1.29
HERC6-204ENST00000502870 ELP3Q9H9T3 547 aa23.11■■□□□ 1.29
HERC6-204ENST00000502870 MYBBP1AQ9BQG0 1328 aaKnown RBP23.1■■□□□ 1.29
HERC6-204ENST00000502870 F8W031 263 aaPredicted RBP23.1■■□□□ 1.29
HERC6-204ENST00000502870 GTF2A2P52657 109 aa23.1■■□□□ 1.29
HERC6-204ENST00000502870 RBM5P52756 815 aaKnown RBP eCLIP23.1■■□□□ 1.29
HERC6-204ENST00000502870 RASA3Q14644 834 aa23.1■■□□□ 1.29
HERC6-204ENST00000502870 ZNF804AQ7Z570 1209 aa23.1■■□□□ 1.29
HERC6-204ENST00000502870 CHRNDQ07001 517 aa23.09■■□□□ 1.29
HERC6-204ENST00000502870 OTUD5Q96G74 571 aa23.09■■□□□ 1.29
HERC6-204ENST00000502870 MS4A4AQ96JQ5 239 aa23.09■■□□□ 1.29
HERC6-204ENST00000502870 PRMT6Q96LA8 375 aaPredicted RBP23.09■■□□□ 1.29
HERC6-204ENST00000502870 CCL15-CCL14A0A0B4J2E2 113 aa23.08■■□□□ 1.29
HERC6-204ENST00000502870 NEURL1BA8MQ27 555 aa23.08■■□□□ 1.29
HERC6-204ENST00000502870 H7C1W4 665 aa23.08■■□□□ 1.29
HERC6-204ENST00000502870 GNRH1P01148 92 aa23.08■■□□□ 1.29
HERC6-204ENST00000502870 CAP1Q01518 475 aa23.08■■□□□ 1.29
HERC6-204ENST00000502870 CCL15Q16663 113 aa23.08■■□□□ 1.29
HERC6-204ENST00000502870 C15orf52Q6ZUT6 534 aaKnown RBP23.08■■□□□ 1.29
HERC6-204ENST00000502870 PLA2G12BQ9BX93 195 aa23.08■■□□□ 1.29
HERC6-204ENST00000502870 STK31Q9BXU1 1019 aa23.08■■□□□ 1.29
HERC6-204ENST00000502870 CWF19L2Q2TBE0 894 aaKnown RBP23.07■■□□□ 1.28
HERC6-204ENST00000502870 CHRDL2Q6WN34 429 aa23.07■■□□□ 1.28
HERC6-204ENST00000502870 PCDHAC2Q9Y5I4 1007 aa23.07■■□□□ 1.28
HERC6-204ENST00000502870 MYCP01106 439 aaPredicted RBP23.06■■□□□ 1.28
HERC6-204ENST00000502870 IL1R1P14778 569 aa23.06■■□□□ 1.28
HERC6-204ENST00000502870 PRMT2P55345 433 aa23.06■■□□□ 1.28
HERC6-204ENST00000502870 C8orf58Q8NAV2 365 aa23.06■■□□□ 1.28
HERC6-204ENST00000502870 BRI3BPQ8WY22 251 aa23.06■■□□□ 1.28
HERC6-204ENST00000502870 ADAMTS8Q9UP79 889 aa23.06■■□□□ 1.28
HERC6-204ENST00000502870 CSADQ9Y600 493 aa23.06■■□□□ 1.28
HERC6-204ENST00000502870 A0A1B0GUL6 1792 aa23.06■■□□□ 1.28
HERC6-204ENST00000502870 SZT2Q5T011 3432 aa23.04■■□□□ 1.28
HERC6-204ENST00000502870 ANKRD18BA2A2Z9 1011 aa23.04■■□□□ 1.28
HERC6-204ENST00000502870 DPF3Q92784 378 aa23.04■■□□□ 1.28
HERC6-204ENST00000502870 MYH16Q9H6N6 1097 aa23.04■■□□□ 1.28
HERC6-204ENST00000502870 ZCCHC17Q9NP64 241 aaKnown RBP23.04■■□□□ 1.28
HERC6-204ENST00000502870 ARAP2Q8WZ64 1704 aa23.03■■□□□ 1.28
HERC6-204ENST00000502870 CSF1RP07333 972 aa23.03■■□□□ 1.28
HERC6-204ENST00000502870 TNNI2P48788 182 aa23.03■■□□□ 1.28
HERC6-204ENST00000502870 SPDYE2Q495Y8 402 aa23.03■■□□□ 1.28
HERC6-204ENST00000502870 NKX2-3Q8TAU0 364 aa23.03■■□□□ 1.28
HERC6-204ENST00000502870 SH3TC2Q8TF17 1288 aa23.03■■□□□ 1.28
HERC6-204ENST00000502870 IRS2Q9Y4H2 1338 aa23.03■■□□□ 1.28
HERC6-204ENST00000502870 CUL9Q8IWT3 2517 aa23.03■■□□□ 1.28
HERC6-204ENST00000502870 TLR2O60603 784 aa23.02■■□□□ 1.28
HERC6-204ENST00000502870 MAP3K9P80192 1104 aa23.02■■□□□ 1.28
HERC6-204ENST00000502870 LACTBP83111 547 aaPredicted RBP23.02■■□□□ 1.28
HERC6-204ENST00000502870 VGLL4Q14135 290 aa23.02■■□□□ 1.28
HERC6-204ENST00000502870 GCKRQ14397 625 aa23.02■■□□□ 1.28
HERC6-204ENST00000502870 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.02■■□□□ 1.28
HERC6-204ENST00000502870 FAM43AQ8N2R8 423 aa23.02■■□□□ 1.28
HERC6-204ENST00000502870 ZNF70Q9UC06 446 aaPredicted RBP23.02■■□□□ 1.28
HERC6-204ENST00000502870 RANBP2P49792 3224 aaKnown RBP23.01■■□□□ 1.27
HERC6-204ENST00000502870 DLL1O00548 723 aa23.01■■□□□ 1.27
HERC6-204ENST00000502870 TAF5LO75529 589 aa23.01■■□□□ 1.27
HERC6-204ENST00000502870 CETPP11597 493 aa23.01■■□□□ 1.27
HERC6-204ENST00000502870 HTATIP2Q9BUP3 242 aa23.01■■□□□ 1.27
HERC6-204ENST00000502870 RBM27Q9P2N5 1060 aaKnown RBP23.01■■□□□ 1.27
HERC6-204ENST00000502870 SERPINA10Q9UK55 444 aa23.01■■□□□ 1.27
HERC6-204ENST00000502870 SLC17A8Q8NDX2 589 aa23■■□□□ 1.27
HERC6-204ENST00000502870 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23■■□□□ 1.27
HERC6-204ENST00000502870 AOX1Q06278 1338 aa23■■□□□ 1.27
HERC6-204ENST00000502870 ZSWIM8A7E2V4 1837 aa22.99■■□□□ 1.27
HERC6-204ENST00000502870 IFIT5Q13325 482 aaKnown RBP22.99■■□□□ 1.27
HERC6-204ENST00000502870 HELBQ8NG08 1087 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms