RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 PLXNA3P51805 1871 aa6.78□□□□□ -1.32
CSTF1-207ENST00000498689 NCOR2Q9Y618 2525 aa6.78□□□□□ -1.32
CSTF1-207ENST00000498689 LOC105371045A0A1W2PR82 267 aa6.77□□□□□ -1.33
CSTF1-207ENST00000498689 FAM177BA6PVY3 158 aa6.77□□□□□ -1.33
CSTF1-207ENST00000498689 SGPL1O95470 568 aa6.77□□□□□ -1.33
CSTF1-207ENST00000498689 CTGFP29279 349 aa6.77□□□□□ -1.33
CSTF1-207ENST00000498689 MRPS5P82675 430 aaKnown RBP6.77□□□□□ -1.33
CSTF1-207ENST00000498689 SLC39A6Q13433 755 aa6.77□□□□□ -1.33
CSTF1-207ENST00000498689 TNIP1Q15025 636 aa6.77□□□□□ -1.33
CSTF1-207ENST00000498689 NBPF5PQ86XG9 351 aaPredicted RBP6.77□□□□□ -1.33
CSTF1-207ENST00000498689 ANKS1AQ92625 1134 aa6.77□□□□□ -1.33
CSTF1-207ENST00000498689 COG3Q96JB2 828 aa6.77□□□□□ -1.33
CSTF1-207ENST00000498689 KCNQ5Q9NR82 932 aa6.77□□□□□ -1.33
CSTF1-207ENST00000498689 THEGQ9P2T0 379 aa6.77□□□□□ -1.33
CSTF1-207ENST00000498689 ZNF330Q9Y3S2 320 aaPredicted RBP6.77□□□□□ -1.33
CSTF1-207ENST00000498689 KIF7Q2M1P5 1343 aa6.76□□□□□ -1.33
CSTF1-207ENST00000498689 RIF1Q5UIP0 2472 aaKnown RBP6.76□□□□□ -1.33
CSTF1-207ENST00000498689 NAV2Q8IVL1 2488 aa6.76□□□□□ -1.33
CSTF1-207ENST00000498689 MANSC4A6NHS7 340 aaPredicted RBP6.76□□□□□ -1.33
CSTF1-207ENST00000498689 CAMTA2O94983 1202 aa6.76□□□□□ -1.33
CSTF1-207ENST00000498689 BMP1P13497 986 aa6.76□□□□□ -1.33
CSTF1-207ENST00000498689 GRIN2CQ14957 1233 aa6.76□□□□□ -1.33
CSTF1-207ENST00000498689 POTEEQ6S8J3 1075 aa6.76□□□□□ -1.33
CSTF1-207ENST00000498689 DPF2Q92785 391 aa6.76□□□□□ -1.33
CSTF1-207ENST00000498689 EYA1Q99502 592 aa6.76□□□□□ -1.33
CSTF1-207ENST00000498689 DACH1Q9UI36 760 aa6.76□□□□□ -1.33
CSTF1-207ENST00000498689 STK24Q9Y6E0 443 aa6.76□□□□□ -1.33
CSTF1-207ENST00000498689 ASH1LQ9NR48 2969 aaKnown RBP6.76□□□□□ -1.33
CSTF1-207ENST00000498689 FRMPD3Q5JV73 1810 aa6.76□□□□□ -1.33
CSTF1-207ENST00000498689 ECM29Q5VYK3 1845 aa6.76□□□□□ -1.33
CSTF1-207ENST00000498689 COL3A1P02461 1466 aaPredicted RBP6.75□□□□□ -1.33
CSTF1-207ENST00000498689 FLT4P35916 1363 aa6.75□□□□□ -1.33
CSTF1-207ENST00000498689 ABCC12Q96J65 1359 aa6.75□□□□□ -1.33
CSTF1-207ENST00000498689 RGS20O76081 388 aa6.75□□□□□ -1.33
CSTF1-207ENST00000498689 GJA5P36382 358 aa6.75□□□□□ -1.33
CSTF1-207ENST00000498689 TCIRG1Q13488 830 aa6.75□□□□□ -1.33
CSTF1-207ENST00000498689 SCARF1Q14162 830 aa6.75□□□□□ -1.33
CSTF1-207ENST00000498689 CC2D2BQ6DHV5 1058 aa6.75□□□□□ -1.33
CSTF1-207ENST00000498689 TMC1Q8TDI8 760 aa6.75□□□□□ -1.33
CSTF1-207ENST00000498689 CLMNQ96JQ2 1002 aa6.75□□□□□ -1.33
CSTF1-207ENST00000498689 ANKRD36CQ5JPF3 1778 aa6.74□□□□□ -1.33
CSTF1-207ENST00000498689 FAM186AA6NE01 2351 aa6.74□□□□□ -1.33
CSTF1-207ENST00000498689 LRRC37AA6NMS7 1700 aa6.74□□□□□ -1.33
CSTF1-207ENST00000498689 TFRCP02786 760 aaKnown RBP6.74□□□□□ -1.33
CSTF1-207ENST00000498689 GRK4P32298 578 aa6.74□□□□□ -1.33
CSTF1-207ENST00000498689 KCNQ1P51787 676 aa6.74□□□□□ -1.33
CSTF1-207ENST00000498689 INHBEP58166 350 aa6.74□□□□□ -1.33
CSTF1-207ENST00000498689 HDGFL2Q7Z4V5 671 aaPredicted RBP6.74□□□□□ -1.33
CSTF1-207ENST00000498689 WNK4Q96J92 1243 aa6.74□□□□□ -1.33
CSTF1-207ENST00000498689 RIPOR2Q9Y4F9 1068 aa6.74□□□□□ -1.33
CSTF1-207ENST00000498689 BRWD1Q9NSI6 2320 aa6.74□□□□□ -1.33
CSTF1-207ENST00000498689 RTL9Q8NET4 1388 aa6.73□□□□□ -1.33
CSTF1-207ENST00000498689 A0A087WZG4 1122 aa6.73□□□□□ -1.33
CSTF1-207ENST00000498689 TFF2Q03403 129 aa6.73□□□□□ -1.33
CSTF1-207ENST00000498689 KIAA2012Q0VF49 1180 aa6.73□□□□□ -1.33
CSTF1-207ENST00000498689 CCDC85BQ15834 202 aaPredicted RBP6.73□□□□□ -1.33
CSTF1-207ENST00000498689 CRY2Q49AN0 593 aa6.73□□□□□ -1.33
CSTF1-207ENST00000498689 LDLRAD1Q5T700 205 aa6.73□□□□□ -1.33
CSTF1-207ENST00000498689 DEFB118Q96PH6 123 aa6.73□□□□□ -1.33
CSTF1-207ENST00000498689 IGSF5Q9NSI5 407 aa6.73□□□□□ -1.33
CSTF1-207ENST00000498689 FAM208BQ5VWN6 2430 aa6.73□□□□□ -1.33
CSTF1-207ENST00000498689 ZNF316A6NFI3 1004 aaPredicted RBP6.72□□□□□ -1.33
CSTF1-207ENST00000498689 LACTBP83111 547 aaPredicted RBP6.72□□□□□ -1.33
CSTF1-207ENST00000498689 C9orf50Q5SZB4 431 aa6.72□□□□□ -1.33
CSTF1-207ENST00000498689 NECAB2Q7Z6G3 386 aa6.72□□□□□ -1.33
CSTF1-207ENST00000498689 PPARGC1BQ86YN6 1023 aaKnown RBP6.72□□□□□ -1.33
CSTF1-207ENST00000498689 IL27Q8NEV9 243 aa6.72□□□□□ -1.33
CSTF1-207ENST00000498689 CNTNAP3BQ96NU0 1288 aa6.72□□□□□ -1.33
CSTF1-207ENST00000498689 RTFDC1Q9BY42 306 aaPredicted RBP6.72□□□□□ -1.33
CSTF1-207ENST00000498689 CNTNAP3Q9BZ76 1288 aa6.72□□□□□ -1.33
CSTF1-207ENST00000498689 BIN2Q9UBW5 565 aaPredicted RBP6.72□□□□□ -1.33
CSTF1-207ENST00000498689 EMILIN1Q9Y6C2 1016 aa6.72□□□□□ -1.33
CSTF1-207ENST00000498689 SIPA1L3O60292 1781 aaPredicted RBP6.72□□□□□ -1.33
CSTF1-207ENST00000498689 COL4A1P02462 1669 aa6.71□□□□□ -1.33
CSTF1-207ENST00000498689 A0A0G2JMZ2 1700 aa6.71□□□□□ -1.34
CSTF1-207ENST00000498689 ST20-MTHFSA0A0A6YYL1 179 aa6.71□□□□□ -1.34
CSTF1-207ENST00000498689 STK25O00506 426 aa6.71□□□□□ -1.34
CSTF1-207ENST00000498689 ITGB8P26012 769 aa6.71□□□□□ -1.34
CSTF1-207ENST00000498689 MTHFSP49914 203 aa6.71□□□□□ -1.34
CSTF1-207ENST00000498689 ARHGEF6Q15052 776 aa6.71□□□□□ -1.34
CSTF1-207ENST00000498689 SHHQ15465 462 aa6.71□□□□□ -1.34
CSTF1-207ENST00000498689 ZNF530Q6P9A1 599 aaPredicted RBP6.71□□□□□ -1.34
CSTF1-207ENST00000498689 FBXO22Q8NEZ5 403 aa6.71□□□□□ -1.34
CSTF1-207ENST00000498689 UIMC1Q96RL1 719 aa6.71□□□□□ -1.34
CSTF1-207ENST00000498689 VPS33BQ9H267 617 aa6.71□□□□□ -1.34
CSTF1-207ENST00000498689 GGNBP2Q9H3C7 697 aa6.71□□□□□ -1.34
CSTF1-207ENST00000498689 DBNDD1Q9H9R9 158 aa6.71□□□□□ -1.34
CSTF1-207ENST00000498689 TAOK2Q9UL54 1235 aa6.71□□□□□ -1.34
CSTF1-207ENST00000498689 ANGEL1Q9UNK9 670 aaKnown RBP6.71□□□□□ -1.34
CSTF1-207ENST00000498689 FAM205AQ6ZU69 1335 aa6.71□□□□□ -1.34
CSTF1-207ENST00000498689 KMT2EQ8IZD2 1858 aa6.7□□□□□ -1.34
CSTF1-207ENST00000498689 PRRC2BQ5JSZ5 2229 aaKnown RBP6.7□□□□□ -1.34
CSTF1-207ENST00000498689 NBEAQ8NFP9 2946 aa6.7□□□□□ -1.34
CSTF1-207ENST00000498689 MED19A0JLT2 244 aaPredicted RBP6.7□□□□□ -1.34
CSTF1-207ENST00000498689 HSP90AB1P08238 724 aaKnown RBP6.7□□□□□ -1.34
CSTF1-207ENST00000498689 ZBTB48P10074 688 aaPredicted RBP6.7□□□□□ -1.34
CSTF1-207ENST00000498689 HOXA10P31260 410 aaPredicted RBP6.7□□□□□ -1.34
CSTF1-207ENST00000498689 PIP4K2AP48426 406 aaPredicted RBP6.7□□□□□ -1.34
CSTF1-207ENST00000498689 TAF1CQ15572 869 aaPredicted RBP6.7□□□□□ -1.34
CSTF1-207ENST00000498689 GRIPAP1Q4V328 841 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms