RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 SEPT12Q8IYM1 358 aa19.22■□□□□ 0.67
COL6A1-206ENST00000498614 DDX11Q96FC9 970 aa19.22■□□□□ 0.67
COL6A1-206ENST00000498614 IFIT1P09914 478 aaKnown RBP19.21■□□□□ 0.67
COL6A1-206ENST00000498614 FGD1P98174 961 aa19.21■□□□□ 0.67
COL6A1-206ENST00000498614 GPR108Q9NPR9 543 aa19.21■□□□□ 0.67
COL6A1-206ENST00000498614 ATRNO75882 1429 aa19.21■□□□□ 0.67
COL6A1-206ENST00000498614 LAMA4Q16363 1823 aa19.21■□□□□ 0.67
COL6A1-206ENST00000498614 A0A0G2JLW4 131 aa19.21■□□□□ 0.67
COL6A1-206ENST00000498614 TPD52L1Q16890 204 aaPredicted RBP19.2■□□□□ 0.66
COL6A1-206ENST00000498614 CCDC85AQ96PX6 553 aaPredicted RBP19.2■□□□□ 0.66
COL6A1-206ENST00000498614 HELLSQ9NRZ9 838 aa19.2■□□□□ 0.66
COL6A1-206ENST00000498614 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.2■□□□□ 0.66
COL6A1-206ENST00000498614 SCRN1Q12765 414 aa19.19■□□□□ 0.66
COL6A1-206ENST00000498614 SYCP1Q15431 976 aa19.19■□□□□ 0.66
COL6A1-206ENST00000498614 ZMYM1Q5SVZ6 1142 aa19.19■□□□□ 0.66
COL6A1-206ENST00000498614 FEZ1Q99689 392 aa19.19■□□□□ 0.66
COL6A1-206ENST00000498614 ATG3Q9NT62 314 aa19.19■□□□□ 0.66
COL6A1-206ENST00000498614 ARID5BQ14865 1188 aa19.19■□□□□ 0.66
COL6A1-206ENST00000498614 IQCB1Q15051 598 aa19.19■□□□□ 0.66
COL6A1-206ENST00000498614 IGSF3O75054 1194 aa19.18■□□□□ 0.66
COL6A1-206ENST00000498614 C11orf57Q6ZUT1 292 aaPredicted RBP19.18■□□□□ 0.66
COL6A1-206ENST00000498614 CCDC112Q8NEF3 446 aa19.18■□□□□ 0.66
COL6A1-206ENST00000498614 CTNNA3Q9UI47 895 aa19.18■□□□□ 0.66
COL6A1-206ENST00000498614 PAXBP1Q9Y5B6 917 aa19.18■□□□□ 0.66
COL6A1-206ENST00000498614 MAST3O60307 1309 aa19.18■□□□□ 0.66
COL6A1-206ENST00000498614 HSPD1P10809 573 aaKnown RBP19.18■□□□□ 0.66
COL6A1-206ENST00000498614 CDC25BP30305 580 aa19.18■□□□□ 0.66
COL6A1-206ENST00000498614 CEBPZQ03701 1054 aaKnown RBP19.18■□□□□ 0.66
COL6A1-206ENST00000498614 ISCA1Q9BUE6 129 aa19.18■□□□□ 0.66
COL6A1-206ENST00000498614 DSCC1Q9BVC3 393 aa19.18■□□□□ 0.66
COL6A1-206ENST00000498614 H3BQV1 296 aa19.17■□□□□ 0.66
COL6A1-206ENST00000498614 CIAO1O76071 339 aa19.17■□□□□ 0.66
COL6A1-206ENST00000498614 FOSBP53539 338 aa19.17■□□□□ 0.66
COL6A1-206ENST00000498614 FKBP4Q02790 459 aaKnown RBP eCLIP19.17■□□□□ 0.66
COL6A1-206ENST00000498614 APOBRQ0VD83 1088 aa19.17■□□□□ 0.66
COL6A1-206ENST00000498614 CCDC57Q2TAC2 916 aa19.17■□□□□ 0.66
COL6A1-206ENST00000498614 IFFO2Q5TF58 517 aa19.17■□□□□ 0.66
COL6A1-206ENST00000498614 DHX32Q7L7V1 743 aaKnown RBP19.17■□□□□ 0.66
COL6A1-206ENST00000498614 OGFRQ9NZT2 677 aa19.17■□□□□ 0.66
COL6A1-206ENST00000498614 CEP126Q9P2H0 1117 aa19.17■□□□□ 0.66
COL6A1-206ENST00000498614 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.17■□□□□ 0.66
COL6A1-206ENST00000498614 USP27XA6NNY8 438 aa19.17■□□□□ 0.66
COL6A1-206ENST00000498614 RNF113AO15541 343 aaKnown RBP19.17■□□□□ 0.66
COL6A1-206ENST00000498614 ITGB4P16144 1822 aa19.17■□□□□ 0.66
COL6A1-206ENST00000498614 TCIRG1Q13488 830 aa19.17■□□□□ 0.66
COL6A1-206ENST00000498614 ZNF592Q92610 1267 aa19.17■□□□□ 0.66
COL6A1-206ENST00000498614 BCL11BQ9C0K0 894 aaPredicted RBP19.17■□□□□ 0.66
COL6A1-206ENST00000498614 RGS17Q9UGC6 210 aaPredicted RBP19.17■□□□□ 0.66
COL6A1-206ENST00000498614 M0R2C6 588 aa19.16■□□□□ 0.66
COL6A1-206ENST00000498614 ONECUT3O60422 494 aaPredicted RBP19.16■□□□□ 0.66
COL6A1-206ENST00000498614 ADORA1P30542 326 aa19.16■□□□□ 0.66
COL6A1-206ENST00000498614 CEP135Q66GS9 1140 aa19.16■□□□□ 0.66
COL6A1-206ENST00000498614 LRRC8AQ8IWT6 810 aa19.16■□□□□ 0.66
COL6A1-206ENST00000498614 FAM89AQ96GI7 184 aa19.16■□□□□ 0.66
COL6A1-206ENST00000498614 BCL9O00512 1426 aa19.16■□□□□ 0.66
COL6A1-206ENST00000498614 E7EWF7 191 aa19.15■□□□□ 0.66
COL6A1-206ENST00000498614 GOLGA6L19H0YKK7 550 aa19.15■□□□□ 0.66
COL6A1-206ENST00000498614 KIF20AO95235 890 aa19.15■□□□□ 0.66
COL6A1-206ENST00000498614 HMGB1P09429 215 aaKnown RBP19.15■□□□□ 0.66
COL6A1-206ENST00000498614 SARM1Q6SZW1 724 aa19.15■□□□□ 0.66
COL6A1-206ENST00000498614 CHST3Q7LGC8 479 aa19.15■□□□□ 0.66
COL6A1-206ENST00000498614 PFKFB2O60825 505 aa19.15■□□□□ 0.66
COL6A1-206ENST00000498614 CCT2P78371 535 aaKnown RBP19.15■□□□□ 0.66
COL6A1-206ENST00000498614 GORABQ5T7V8 394 aa19.15■□□□□ 0.66
COL6A1-206ENST00000498614 DNAJC10Q8IXB1 793 aa19.15■□□□□ 0.66
COL6A1-206ENST00000498614 FTOQ9C0B1 505 aaKnown RBP eCLIP19.15■□□□□ 0.66
COL6A1-206ENST00000498614 NAP1L2Q9ULW6 460 aaPredicted RBP19.15■□□□□ 0.66
COL6A1-206ENST00000498614 DOT1LQ8TEK3 1739 aa19.15■□□□□ 0.66
COL6A1-206ENST00000498614 A0A087WWV3 80 aa19.14■□□□□ 0.66
COL6A1-206ENST00000498614 PPFIA3O75145 1194 aa19.14■□□□□ 0.66
COL6A1-206ENST00000498614 CAVIN2O95810 425 aa19.14■□□□□ 0.66
COL6A1-206ENST00000498614 ADD1P35611 737 aaKnown RBP19.14■□□□□ 0.66
COL6A1-206ENST00000498614 TTC39AQ5SRH9 613 aa19.14■□□□□ 0.66
COL6A1-206ENST00000498614 ZNF772Q68DY9 489 aaPredicted RBP19.14■□□□□ 0.66
COL6A1-206ENST00000498614 TTLL5Q6EMB2 1281 aa19.14■□□□□ 0.66
COL6A1-206ENST00000498614 NSUN7Q8NE18 718 aaKnown RBP19.14■□□□□ 0.65
COL6A1-206ENST00000498614 SMARCC2Q8TAQ2 1214 aa19.14■□□□□ 0.65
COL6A1-206ENST00000498614 OSBP2Q969R2 916 aa19.14■□□□□ 0.65
COL6A1-206ENST00000498614 GOLPH3LQ9H4A5 285 aa19.14■□□□□ 0.65
COL6A1-206ENST00000498614 ZSCAN16Q9H4T2 348 aaPredicted RBP19.14■□□□□ 0.65
COL6A1-206ENST00000498614 CGNQ9P2M7 1197 aaKnown RBP19.14■□□□□ 0.65
COL6A1-206ENST00000498614 CFAP45Q9UL16 551 aa19.14■□□□□ 0.65
COL6A1-206ENST00000498614 EXOSC10Q01780 885 aaKnown RBP19.13■□□□□ 0.65
COL6A1-206ENST00000498614 XAGE2Q96GT9 111 aa19.13■□□□□ 0.65
COL6A1-206ENST00000498614 MRFAP1L1Q96HT8 127 aa19.13■□□□□ 0.65
COL6A1-206ENST00000498614 SLC4A9Q96Q91 983 aa19.13■□□□□ 0.65
COL6A1-206ENST00000498614 CTDNEP1O95476 244 aa19.13■□□□□ 0.65
COL6A1-206ENST00000498614 RBM6P78332 1123 aaKnown RBP19.13■□□□□ 0.65
COL6A1-206ENST00000498614 TAF7LQ5H9L4 462 aa19.13■□□□□ 0.65
COL6A1-206ENST00000498614 CCDC158Q5M9N0 1113 aa19.13■□□□□ 0.65
COL6A1-206ENST00000498614 KIF6Q6ZMV9 814 aa19.13■□□□□ 0.65
COL6A1-206ENST00000498614 CCAR1Q8IX12 1150 aaKnown RBP19.13■□□□□ 0.65
COL6A1-206ENST00000498614 NCOA5Q9HCD5 579 aaKnown RBP19.13■□□□□ 0.65
COL6A1-206ENST00000498614 PTPDC1A2A3K4 754 aa19.12■□□□□ 0.65
COL6A1-206ENST00000498614 KCNQ4P56696 695 aa19.12■□□□□ 0.65
COL6A1-206ENST00000498614 STX1AQ16623 288 aa19.12■□□□□ 0.65
COL6A1-206ENST00000498614 SYNE4Q8N205 404 aa19.12■□□□□ 0.65
COL6A1-206ENST00000498614 DDX41Q9UJV9 622 aaKnown RBP19.12■□□□□ 0.65
COL6A1-206ENST00000498614 THSD7AQ9UPZ6 1657 aa19.12■□□□□ 0.65
COL6A1-206ENST00000498614 SCARF1Q14162 830 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms