RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 SEC31BQ9NQW1 1179 aa11.55□□□□□ -0.56
SNX13-212ENST00000498463 ST7Q9NRC1 585 aa11.55□□□□□ -0.56
SNX13-212ENST00000498463 MAPK8IP1Q9UQF2 711 aa11.55□□□□□ -0.56
SNX13-212ENST00000498463 GDF9O60383 454 aa11.54□□□□□ -0.56
SNX13-212ENST00000498463 SOX18P35713 384 aa11.54□□□□□ -0.56
SNX13-212ENST00000498463 ARSHQ5FYA8 562 aa11.54□□□□□ -0.56
SNX13-212ENST00000498463 PLD4Q96BZ4 506 aa11.54□□□□□ -0.56
SNX13-212ENST00000498463 CAPN5O15484 640 aaPredicted RBP11.53□□□□□ -0.56
SNX13-212ENST00000498463 PDPK1O15530 556 aa11.53□□□□□ -0.56
SNX13-212ENST00000498463 TRPA1O75762 1119 aa11.53□□□□□ -0.56
SNX13-212ENST00000498463 TRIM37O94972 964 aa11.53□□□□□ -0.56
SNX13-212ENST00000498463 PARNO95453 639 aaKnown RBP11.53□□□□□ -0.56
SNX13-212ENST00000498463 SFSWAPQ12872 951 aaKnown RBP11.53□□□□□ -0.56
SNX13-212ENST00000498463 HYAL2Q12891 473 aa11.53□□□□□ -0.56
SNX13-212ENST00000498463 RASGRF1Q13972 1273 aa11.53□□□□□ -0.56
SNX13-212ENST00000498463 FBXW10Q5XX13 1052 aa11.53□□□□□ -0.56
SNX13-212ENST00000498463 CCDC84Q86UT8 332 aaPredicted RBP11.53□□□□□ -0.56
SNX13-212ENST00000498463 BHLHE41Q9C0J9 482 aaPredicted RBP11.53□□□□□ -0.56
SNX13-212ENST00000498463 TMEM260Q9NX78 707 aa11.53□□□□□ -0.56
SNX13-212ENST00000498463 ARID4BQ4LE39 1312 aaPredicted RBP11.53□□□□□ -0.56
SNX13-212ENST00000498463 EFSO43281 561 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 F11P03951 625 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 PSAPP07602 524 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 FAM157BP0CG42 384 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 MCM4P33991 863 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 AMPD3Q01432 767 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 FAAP100Q0VG06 881 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 PLEKHG6Q3KR16 790 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 CEP120Q8N960 986 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 OR6P1Q8NGX9 317 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 GATAD2BQ8WXI9 593 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 RNF166Q96A37 237 aaPredicted RBP11.52□□□□□ -0.57
SNX13-212ENST00000498463 HHIPQ96QV1 700 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 CRBNQ96SW2 442 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 ZNF576Q9H609 170 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 TLR7Q9NYK1 1049 aaKnown RBP11.52□□□□□ -0.57
SNX13-212ENST00000498463 PPME1Q9Y570 386 aa11.52□□□□□ -0.57
SNX13-212ENST00000498463 TTLL8A6PVC2 850 aa11.51□□□□□ -0.57
SNX13-212ENST00000498463 EIF5BO60841 1220 aaKnown RBP11.51□□□□□ -0.57
SNX13-212ENST00000498463 NFKB1P19838 968 aa11.51□□□□□ -0.57
SNX13-212ENST00000498463 GYS2P54840 703 aa11.51□□□□□ -0.57
SNX13-212ENST00000498463 SQSTM1Q13501 440 aa11.51□□□□□ -0.57
SNX13-212ENST00000498463 CWF19L2Q2TBE0 894 aaKnown RBP11.51□□□□□ -0.57
SNX13-212ENST00000498463 RPS26P11Q5JNZ5 115 aaPredicted RBP11.51□□□□□ -0.57
SNX13-212ENST00000498463 MIR1-1HGQ9H1L0 117 aa11.51□□□□□ -0.57
SNX13-212ENST00000498463 GPN3Q9UHW5 284 aaPredicted RBP11.51□□□□□ -0.57
SNX13-212ENST00000498463 DYRK1BQ9Y463 629 aa11.51□□□□□ -0.57
SNX13-212ENST00000498463 A0A096LPE4 126 aa11.5□□□□□ -0.57
SNX13-212ENST00000498463 A0A1W2PPZ6 126 aa11.5□□□□□ -0.57
SNX13-212ENST00000498463 FAM221AA4D161 298 aa11.5□□□□□ -0.57
SNX13-212ENST00000498463 HOXD8P13378 290 aaPredicted RBP11.5□□□□□ -0.57
SNX13-212ENST00000498463 LMNB1P20700 586 aa11.5□□□□□ -0.57
SNX13-212ENST00000498463 MPP2Q14168 576 aa11.5□□□□□ -0.57
SNX13-212ENST00000498463 CCDC181Q5TID7 509 aa11.5□□□□□ -0.57
SNX13-212ENST00000498463 C16orf86Q6ZW13 317 aa11.5□□□□□ -0.57
SNX13-212ENST00000498463 PNMA5Q96PV4 448 aa11.5□□□□□ -0.57
SNX13-212ENST00000498463 IRF2BPLQ9H1B7 796 aa11.5□□□□□ -0.57
SNX13-212ENST00000498463 DDX56Q9NY93 547 aaKnown RBP11.5□□□□□ -0.57
SNX13-212ENST00000498463 ZNRF3Q9ULT6 936 aa11.5□□□□□ -0.57
SNX13-212ENST00000498463 PCDHB5Q9Y5E4 795 aa11.5□□□□□ -0.57
SNX13-212ENST00000498463 ZNF165P49910 485 aa11.49□□□□□ -0.57
SNX13-212ENST00000498463 PLAURQ03405 335 aa11.49□□□□□ -0.57
SNX13-212ENST00000498463 SEPT6Q14141 434 aa11.49□□□□□ -0.57
SNX13-212ENST00000498463 EFHC2Q5JST6 749 aa11.49□□□□□ -0.57
SNX13-212ENST00000498463 NSUN5Q96P11 429 aaKnown RBP11.49□□□□□ -0.57
SNX13-212ENST00000498463 FEZ1Q99689 392 aa11.49□□□□□ -0.57
SNX13-212ENST00000498463 LEMD3Q9Y2U8 911 aa11.49□□□□□ -0.57
SNX13-212ENST00000498463 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.49□□□□□ -0.57
SNX13-212ENST00000498463 FXNQ16595 210 aa11.48□□□□□ -0.57
SNX13-212ENST00000498463 C2orf27AQ580R0 203 aa11.48□□□□□ -0.57
SNX13-212ENST00000498463 TAF7LQ5H9L4 462 aa11.48□□□□□ -0.57
SNX13-212ENST00000498463 LARP1BQ659C4 914 aaKnown RBP11.48□□□□□ -0.57
SNX13-212ENST00000498463 KANK3Q6NY19 840 aa11.48□□□□□ -0.57
SNX13-212ENST00000498463 MRPL14Q6P1L8 145 aaKnown RBP11.48□□□□□ -0.57
SNX13-212ENST00000498463 REC114Q7Z4M0 266 aa11.48□□□□□ -0.57
SNX13-212ENST00000498463 TMEM102Q8N9M5 508 aaPredicted RBP11.48□□□□□ -0.57
SNX13-212ENST00000498463 STAG1Q8WVM7 1258 aa11.48□□□□□ -0.57
SNX13-212ENST00000498463 JARID2Q92833 1246 aaPredicted RBP11.48□□□□□ -0.57
SNX13-212ENST00000498463 TNKS2Q9H2K2 1166 aa11.48□□□□□ -0.57
SNX13-212ENST00000498463 NFKBIEO00221 500 aa11.47□□□□□ -0.57
SNX13-212ENST00000498463 ATXN7O15265 892 aaPredicted RBP11.47□□□□□ -0.57
SNX13-212ENST00000498463 MAP3K6O95382 1288 aa11.47□□□□□ -0.57
SNX13-212ENST00000498463 RASIP1Q5U651 963 aa11.47□□□□□ -0.57
SNX13-212ENST00000498463 LSRQ86X29 649 aaPredicted RBP11.47□□□□□ -0.57
SNX13-212ENST00000498463 REXO1Q8N1G1 1221 aaKnown RBP11.47□□□□□ -0.57
SNX13-212ENST00000498463 ASAP3Q8TDY4 903 aa11.47□□□□□ -0.57
SNX13-212ENST00000498463 NXPE3Q969Y0 559 aa11.47□□□□□ -0.57
SNX13-212ENST00000498463 GAS2L1Q99501 681 aaPredicted RBP11.47□□□□□ -0.57
SNX13-212ENST00000498463 BRMS1Q9HCU9 246 aa11.47□□□□□ -0.57
SNX13-212ENST00000498463 TMEM39AQ9NV64 488 aa11.47□□□□□ -0.57
SNX13-212ENST00000498463 DCDC2BA2VCK2 349 aa11.46□□□□□ -0.57
SNX13-212ENST00000498463 FIGNL2A6NMB9 653 aa11.46□□□□□ -0.57
SNX13-212ENST00000498463 TKFCQ3LXA3 575 aa11.46□□□□□ -0.57
SNX13-212ENST00000498463 MTERF2Q49AM1 385 aa11.46□□□□□ -0.57
SNX13-212ENST00000498463 FIGNL1Q6PIW4 674 aa11.46□□□□□ -0.57
SNX13-212ENST00000498463 POTEGQ6S5H5 508 aa11.46□□□□□ -0.57
SNX13-212ENST00000498463 GK5Q6ZS86 529 aa11.46□□□□□ -0.57
SNX13-212ENST00000498463 SUGT1Q9Y2Z0 365 aa11.46□□□□□ -0.57
SNX13-212ENST00000498463 KHNYNO15037 678 aaKnown RBP11.45□□□□□ -0.58
SNX13-212ENST00000498463 CILPO75339 1184 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms