RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 NUDT8Q8WV74 236 aa7.45□□□□□ -1.22
HMGXB4-208ENST00000498325 UBE2OQ9C0C9 1292 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-208ENST00000498325 IGFLR1Q9H665 355 aa7.45□□□□□ -1.22
HMGXB4-208ENST00000498325 ANKIB1Q9P2G1 1089 aa7.45□□□□□ -1.22
HMGXB4-208ENST00000498325 NOD1Q9Y239 953 aa7.45□□□□□ -1.22
HMGXB4-208ENST00000498325 GLI3P10071 1580 aa7.45□□□□□ -1.22
HMGXB4-208ENST00000498325 CHD2O14647 1828 aaKnown RBP7.45□□□□□ -1.22
HMGXB4-208ENST00000498325 RALGAPBQ86X10 1494 aa7.44□□□□□ -1.22
HMGXB4-208ENST00000498325 SFI1A8K8P3 1242 aa7.44□□□□□ -1.22
HMGXB4-208ENST00000498325 EPHA4P54764 986 aa7.44□□□□□ -1.22
HMGXB4-208ENST00000498325 GTF2IP78347 998 aa7.44□□□□□ -1.22
HMGXB4-208ENST00000498325 WASHC4Q2M389 1173 aa7.44□□□□□ -1.22
HMGXB4-208ENST00000498325 SH3PXD2AQ5TCZ1 1133 aa7.44□□□□□ -1.22
HMGXB4-208ENST00000498325 FMR1NBQ8N0W7 255 aaPredicted RBP7.44□□□□□ -1.22
HMGXB4-208ENST00000498325 HSH2DQ96JZ2 352 aa7.44□□□□□ -1.22
HMGXB4-208ENST00000498325 SLC6A14Q9UN76 642 aa7.44□□□□□ -1.22
HMGXB4-208ENST00000498325 CEP350Q5VT06 3117 aa7.44□□□□□ -1.22
HMGXB4-208ENST00000498325 CAMTA1Q9Y6Y1 1673 aa7.44□□□□□ -1.22
HMGXB4-208ENST00000498325 CCDC144AA2RUR9 1427 aa7.44□□□□□ -1.22
HMGXB4-208ENST00000498325 UTRNP46939 3433 aa7.43□□□□□ -1.22
HMGXB4-208ENST00000498325 SOX11P35716 441 aa7.43□□□□□ -1.22
HMGXB4-208ENST00000498325 DIEXFQ68CQ4 756 aaKnown RBP7.43□□□□□ -1.22
HMGXB4-208ENST00000498325 DMRTC2Q8IXT2 367 aaPredicted RBP7.43□□□□□ -1.22
HMGXB4-208ENST00000498325 TNS4Q8IZW8 715 aa7.43□□□□□ -1.22
HMGXB4-208ENST00000498325 TBX22Q9Y458 520 aa7.43□□□□□ -1.22
HMGXB4-208ENST00000498325 PLEKHG1Q9ULL1 1385 aa7.43□□□□□ -1.22
HMGXB4-208ENST00000498325 ARHGAP31Q2M1Z3 1444 aa7.43□□□□□ -1.22
HMGXB4-208ENST00000498325 CEP152O94986 1710 aa7.42□□□□□ -1.22
HMGXB4-208ENST00000498325 PIK3CDO00329 1044 aa7.42□□□□□ -1.22
HMGXB4-208ENST00000498325 PAX4O43316 350 aa7.42□□□□□ -1.22
HMGXB4-208ENST00000498325 ABL2P42684 1182 aa7.42□□□□□ -1.22
HMGXB4-208ENST00000498325 AFF1P51825 1210 aaKnown RBP7.42□□□□□ -1.22
HMGXB4-208ENST00000498325 TYRO3Q06418 890 aa7.42□□□□□ -1.22
HMGXB4-208ENST00000498325 C1orf53Q5VUE5 145 aa7.42□□□□□ -1.22
HMGXB4-208ENST00000498325 BRWD3Q6RI45 1802 aa7.41□□□□□ -1.22
HMGXB4-208ENST00000498325 CFAP65Q6ZU64 1925 aaKnown RBP7.41□□□□□ -1.22
HMGXB4-208ENST00000498325 EZH2Q15910 746 aaKnown RBP7.41□□□□□ -1.22
HMGXB4-208ENST00000498325 PSAPL1Q6NUJ1 521 aa7.41□□□□□ -1.22
HMGXB4-208ENST00000498325 KRT27Q7Z3Y8 459 aa7.41□□□□□ -1.22
HMGXB4-208ENST00000498325 GDPD2Q9HCC8 539 aa7.41□□□□□ -1.22
HMGXB4-208ENST00000498325 PTPRUQ92729 1446 aa7.41□□□□□ -1.22
HMGXB4-208ENST00000498325 LZTS3O60299 673 aaPredicted RBP7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 SKIP12755 728 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 UNC5CLQ8IV45 518 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 ZNF280CQ8ND82 737 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 WFDC12Q8WWY7 111 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 SUSD3Q96L08 255 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 PCMTD2Q9NV79 361 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 PPP1R1BQ9UD71 204 aaPredicted RBP7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 AMOTL2Q9Y2J4 779 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 CHMP3Q9Y3E7 222 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 HCN4Q9Y3Q4 1203 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 NINLQ9Y2I6 1382 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 ZFYVE9O95405 1425 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 DCCP43146 1447 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 ADAMTS13Q76LX8 1427 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 MYOM2P54296 1465 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 LMTK2Q8IWU2 1503 aa7.4□□□□□ -1.22
HMGXB4-208ENST00000498325 SPHKAPQ2M3C7 1700 aa7.39□□□□□ -1.23
HMGXB4-208ENST00000498325 E9PCH4 1651 aa7.39□□□□□ -1.23
HMGXB4-208ENST00000498325 RGS9O75916 674 aaPredicted RBP7.39□□□□□ -1.23
HMGXB4-208ENST00000498325 TXKP42681 527 aa7.39□□□□□ -1.23
HMGXB4-208ENST00000498325 IREB2P48200 963 aaKnown RBP7.39□□□□□ -1.23
HMGXB4-208ENST00000498325 PSMA6P60900 246 aaKnown RBP7.39□□□□□ -1.23
HMGXB4-208ENST00000498325 PHACTR1Q9C0D0 580 aa7.39□□□□□ -1.23
HMGXB4-208ENST00000498325 DNAJB12Q9NXW2 375 aaKnown RBP7.39□□□□□ -1.23
HMGXB4-208ENST00000498325 ADGRB3O60242 1522 aa7.38□□□□□ -1.23
HMGXB4-208ENST00000498325 COBLO75128 1261 aa7.38□□□□□ -1.23
HMGXB4-208ENST00000498325 BRPF1P55201 1214 aaPredicted RBP7.38□□□□□ -1.23
HMGXB4-208ENST00000498325 NBPF8Q3BBV2 869 aa7.38□□□□□ -1.23
HMGXB4-208ENST00000498325 DCAF11Q8TEB1 546 aa7.38□□□□□ -1.23
HMGXB4-208ENST00000498325 CAMKK2Q96RR4 588 aa7.38□□□□□ -1.23
HMGXB4-208ENST00000498325 ORAI2Q96SN7 254 aa7.38□□□□□ -1.23
HMGXB4-208ENST00000498325 EFCC1Q9HA90 598 aa7.38□□□□□ -1.23
HMGXB4-208ENST00000498325 TRPM2O94759 1503 aa7.37□□□□□ -1.23
HMGXB4-208ENST00000498325 SLIT2O94813 1529 aa7.37□□□□□ -1.23
HMGXB4-208ENST00000498325 NOS3P29474 1203 aa7.37□□□□□ -1.23
HMGXB4-208ENST00000498325 HIRAP54198 1017 aaPredicted RBP7.37□□□□□ -1.23
HMGXB4-208ENST00000498325 NCOA4Q13772 614 aa7.37□□□□□ -1.23
HMGXB4-208ENST00000498325 RGL3Q3MIN7 710 aa7.37□□□□□ -1.23
HMGXB4-208ENST00000498325 ZNF326Q5BKZ1 582 aaKnown RBP7.37□□□□□ -1.23
HMGXB4-208ENST00000498325 DTWD1Q8N5C7 304 aa7.37□□□□□ -1.23
HMGXB4-208ENST00000498325 SPON1Q9HCB6 807 aa7.37□□□□□ -1.23
HMGXB4-208ENST00000498325 NAGPAQ9UK23 515 aa7.37□□□□□ -1.23
HMGXB4-208ENST00000498325 COL22A1Q8NFW1 1626 aaPredicted RBP7.37□□□□□ -1.23
HMGXB4-208ENST00000498325 DISP2A7MBM2 1401 aa7.36□□□□□ -1.23
HMGXB4-208ENST00000498325 RIMS2Q9UQ26 1411 aa7.36□□□□□ -1.23
HMGXB4-208ENST00000498325 KCNQ2O43526 872 aa7.36□□□□□ -1.23
HMGXB4-208ENST00000498325 MSL1Q68DK7 614 aa7.36□□□□□ -1.23
HMGXB4-208ENST00000498325 PRR23CQ6ZRP0 262 aa7.36□□□□□ -1.23
HMGXB4-208ENST00000498325 FBXO11Q86XK2 927 aa7.36□□□□□ -1.23
HMGXB4-208ENST00000498325 PNMA5Q96PV4 448 aa7.36□□□□□ -1.23
HMGXB4-208ENST00000498325 TSPAN10Q9H1Z9 355 aaPredicted RBP7.36□□□□□ -1.23
HMGXB4-208ENST00000498325 C1orf167Q5SNV9 1468 aa7.36□□□□□ -1.23
HMGXB4-208ENST00000498325 PIK3R4Q99570 1358 aa7.35□□□□□ -1.23
HMGXB4-208ENST00000498325 LAMC1P11047 1609 aa7.35□□□□□ -1.23
HMGXB4-208ENST00000498325 HSPA5P11021 654 aaKnown RBP7.35□□□□□ -1.23
HMGXB4-208ENST00000498325 YBX3P16989 372 aaKnown RBP eCLIP7.35□□□□□ -1.23
HMGXB4-208ENST00000498325 SSTR4P31391 388 aa7.35□□□□□ -1.23
HMGXB4-208ENST00000498325 BTLAQ7Z6A9 289 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms