RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 CAP1Q01518 475 aa16.28■□□□□ 0.2
TRIM27-207ENST00000498117 OTUD5Q96G74 571 aa16.28■□□□□ 0.2
TRIM27-207ENST00000498117 MPHOSPH8Q99549 860 aa16.28■□□□□ 0.2
TRIM27-207ENST00000498117 ZFYVE28Q9HCC9 887 aa16.28■□□□□ 0.2
TRIM27-207ENST00000498117 SSC5DA1L4H1 1573 aa16.27■□□□□ 0.2
TRIM27-207ENST00000498117 ZNF646O15015 1829 aaPredicted RBP16.27■□□□□ 0.2
TRIM27-207ENST00000498117 CLRN2A0PK11 232 aa16.27■□□□□ 0.2
TRIM27-207ENST00000498117 ZNF853P0CG23 659 aa16.27■□□□□ 0.2
TRIM27-207ENST00000498117 KLRK1P26718 216 aa16.27■□□□□ 0.2
TRIM27-207ENST00000498117 NEXNQ0ZGT2 675 aa16.27■□□□□ 0.2
TRIM27-207ENST00000498117 CFAP100Q494V2 611 aa16.27■□□□□ 0.2
TRIM27-207ENST00000498117 CCDC30Q5VVM6 783 aa16.27■□□□□ 0.2
TRIM27-207ENST00000498117 KSR2Q6VAB6 950 aa16.27■□□□□ 0.2
TRIM27-207ENST00000498117 PRMT6Q96LA8 375 aaPredicted RBP16.27■□□□□ 0.2
TRIM27-207ENST00000498117 VEZTQ9HBM0 779 aa16.27■□□□□ 0.2
TRIM27-207ENST00000498117 PTCH2Q9Y6C5 1203 aa16.27■□□□□ 0.2
TRIM27-207ENST00000498117 SPDYE2BA6NHP3 402 aa16.26■□□□□ 0.19
TRIM27-207ENST00000498117 IGKV5-2P06315 115 aa16.26■□□□□ 0.19
TRIM27-207ENST00000498117 SPDYE6P0CI01 402 aa16.26■□□□□ 0.19
TRIM27-207ENST00000498117 RASA3Q14644 834 aa16.26■□□□□ 0.19
TRIM27-207ENST00000498117 WDR43Q15061 677 aaKnown RBP eCLIP16.26■□□□□ 0.19
TRIM27-207ENST00000498117 CERS5Q8N5B7 392 aa16.26■□□□□ 0.19
TRIM27-207ENST00000498117 OPTNQ96CV9 577 aa16.26■□□□□ 0.19
TRIM27-207ENST00000498117 MS4A4AQ96JQ5 239 aa16.26■□□□□ 0.19
TRIM27-207ENST00000498117 PI4KAP2A4QPH2 592 aa16.25■□□□□ 0.19
TRIM27-207ENST00000498117 F8W031 263 aaPredicted RBP16.25■□□□□ 0.19
TRIM27-207ENST00000498117 WDHD1O75717 1129 aaPredicted RBP16.25■□□□□ 0.19
TRIM27-207ENST00000498117 ITGA6P23229 1130 aa16.25■□□□□ 0.19
TRIM27-207ENST00000498117 GNAI1P63096 354 aa16.25■□□□□ 0.19
TRIM27-207ENST00000498117 TAF1CQ15572 869 aaPredicted RBP16.25■□□□□ 0.19
TRIM27-207ENST00000498117 PI4KAP1Q8N8J0 262 aa16.25■□□□□ 0.19
TRIM27-207ENST00000498117 ELP3Q9H9T3 547 aa16.25■□□□□ 0.19
TRIM27-207ENST00000498117 IFT57Q9NWB7 429 aa16.25■□□□□ 0.19
TRIM27-207ENST00000498117 PCDHAC2Q9Y5I4 1007 aa16.25■□□□□ 0.19
TRIM27-207ENST00000498117 H7C1W4 665 aa16.24■□□□□ 0.19
TRIM27-207ENST00000498117 MYCP01106 439 aaPredicted RBP16.24■□□□□ 0.19
TRIM27-207ENST00000498117 GTF2A2P52657 109 aa16.24■□□□□ 0.19
TRIM27-207ENST00000498117 RBM5P52756 815 aaKnown RBP eCLIP16.24■□□□□ 0.19
TRIM27-207ENST00000498117 FKBP1AP62942 108 aaKnown RBP16.24■□□□□ 0.19
TRIM27-207ENST00000498117 CALD1Q05682 793 aaKnown RBP16.24■□□□□ 0.19
TRIM27-207ENST00000498117 CHRNDQ07001 517 aa16.24■□□□□ 0.19
TRIM27-207ENST00000498117 TNFAIP1Q13829 316 aa16.24■□□□□ 0.19
TRIM27-207ENST00000498117 LAMB1P07942 1786 aa16.23■□□□□ 0.19
TRIM27-207ENST00000498117 KIF22Q14807 665 aa16.23■□□□□ 0.19
TRIM27-207ENST00000498117 CHRDL2Q6WN34 429 aa16.23■□□□□ 0.19
TRIM27-207ENST00000498117 C15orf52Q6ZUT6 534 aaKnown RBP16.23■□□□□ 0.19
TRIM27-207ENST00000498117 UBE3BQ7Z3V4 1068 aa16.23■□□□□ 0.19
TRIM27-207ENST00000498117 C8orf58Q8NAV2 365 aa16.23■□□□□ 0.19
TRIM27-207ENST00000498117 BRI3BPQ8WY22 251 aa16.23■□□□□ 0.19
TRIM27-207ENST00000498117 PLA2G12BQ9BX93 195 aa16.23■□□□□ 0.19
TRIM27-207ENST00000498117 CCL15-CCL14A0A0B4J2E2 113 aa16.22■□□□□ 0.19
TRIM27-207ENST00000498117 NEURL1BA8MQ27 555 aa16.22■□□□□ 0.19
TRIM27-207ENST00000498117 DLL1O00548 723 aa16.22■□□□□ 0.19
TRIM27-207ENST00000498117 IL1R1P14778 569 aa16.22■□□□□ 0.19
TRIM27-207ENST00000498117 CCL15Q16663 113 aa16.22■□□□□ 0.19
TRIM27-207ENST00000498117 CWF19L2Q2TBE0 894 aaKnown RBP16.22■□□□□ 0.19
TRIM27-207ENST00000498117 ZNF804AQ7Z570 1209 aa16.22■□□□□ 0.19
TRIM27-207ENST00000498117 DPF3Q92784 378 aa16.22■□□□□ 0.19
TRIM27-207ENST00000498117 ADAMTS8Q9UP79 889 aa16.22■□□□□ 0.19
TRIM27-207ENST00000498117 SZT2Q5T011 3432 aa16.22■□□□□ 0.19
TRIM27-207ENST00000498117 GNRH1P01148 92 aa16.21■□□□□ 0.19
TRIM27-207ENST00000498117 CSF1RP07333 972 aa16.21■□□□□ 0.19
TRIM27-207ENST00000498117 MAP3K9P80192 1104 aa16.21■□□□□ 0.19
TRIM27-207ENST00000498117 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.21■□□□□ 0.19
TRIM27-207ENST00000498117 SLC17A8Q8NDX2 589 aa16.21■□□□□ 0.19
TRIM27-207ENST00000498117 SH3TC2Q8TF17 1288 aa16.21■□□□□ 0.19
TRIM27-207ENST00000498117 SPEF2Q9C093 1822 aa16.21■□□□□ 0.19
TRIM27-207ENST00000498117 MYH3P11055 1940 aa16.21■□□□□ 0.19
TRIM27-207ENST00000498117 TAF5LO75529 589 aa16.2■□□□□ 0.18
TRIM27-207ENST00000498117 PRMT2P55345 433 aa16.2■□□□□ 0.18
TRIM27-207ENST00000498117 FAM43AQ8N2R8 423 aa16.2■□□□□ 0.18
TRIM27-207ENST00000498117 RBM27Q9P2N5 1060 aaKnown RBP16.2■□□□□ 0.18
TRIM27-207ENST00000498117 CSADQ9Y600 493 aa16.2■□□□□ 0.18
TRIM27-207ENST00000498117 AOX1Q06278 1338 aa16.19■□□□□ 0.18
TRIM27-207ENST00000498117 MYBBP1AQ9BQG0 1328 aaKnown RBP16.19■□□□□ 0.18
TRIM27-207ENST00000498117 IRS2Q9Y4H2 1338 aa16.19■□□□□ 0.18
TRIM27-207ENST00000498117 ANKRD18BA2A2Z9 1011 aa16.19■□□□□ 0.18
TRIM27-207ENST00000498117 SNAP23O00161 211 aa16.19■□□□□ 0.18
TRIM27-207ENST00000498117 TLR2O60603 784 aa16.19■□□□□ 0.18
TRIM27-207ENST00000498117 LACTBP83111 547 aaPredicted RBP16.19■□□□□ 0.18
TRIM27-207ENST00000498117 SPDYE2Q495Y8 402 aa16.19■□□□□ 0.18
TRIM27-207ENST00000498117 CNKSR2Q8WXI2 1034 aa16.19■□□□□ 0.18
TRIM27-207ENST00000498117 STK31Q9BXU1 1019 aa16.19■□□□□ 0.18
TRIM27-207ENST00000498117 ZNF70Q9UC06 446 aaPredicted RBP16.19■□□□□ 0.18
TRIM27-207ENST00000498117 ECM29Q5VYK3 1845 aa16.18■□□□□ 0.18
TRIM27-207ENST00000498117 VGLL4Q14135 290 aa16.18■□□□□ 0.18
TRIM27-207ENST00000498117 GCKRQ14397 625 aa16.18■□□□□ 0.18
TRIM27-207ENST00000498117 HELBQ8NG08 1087 aaPredicted RBP16.18■□□□□ 0.18
TRIM27-207ENST00000498117 NKX2-3Q8TAU0 364 aa16.18■□□□□ 0.18
TRIM27-207ENST00000498117 ARHGAP39Q9C0H5 1083 aa16.18■□□□□ 0.18
TRIM27-207ENST00000498117 ZCCHC17Q9NP64 241 aaKnown RBP16.18■□□□□ 0.18
TRIM27-207ENST00000498117 CETPP11597 493 aa16.17■□□□□ 0.18
TRIM27-207ENST00000498117 TNNI2P48788 182 aa16.17■□□□□ 0.18
TRIM27-207ENST00000498117 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRIM27-207ENST00000498117 TEPSINQ96N21 525 aa16.17■□□□□ 0.18
TRIM27-207ENST00000498117 HTATIP2Q9BUP3 242 aa16.17■□□□□ 0.18
TRIM27-207ENST00000498117 TDRD3Q9H7E2 651 aaKnown RBP16.17■□□□□ 0.18
TRIM27-207ENST00000498117 SERPINA10Q9UK55 444 aa16.17■□□□□ 0.18
TRIM27-207ENST00000498117 JAG2Q9Y219 1238 aa16.17■□□□□ 0.18
TRIM27-207ENST00000498117 TSPYL6Q8N831 410 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 269.8 ms