RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 CABP4P57796 275 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 ATP2B2Q01814 1243 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 COL19A1Q14993 1142 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 FAM117BQ6P1L5 589 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 ADAMTSL4Q6UY14 1074 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 FBXO11Q86XK2 927 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 CCNJLQ8IV13 435 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 ASAP3Q8TDY4 903 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 DCAF11Q8TEB1 546 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 BSNDQ8WZ55 320 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 KRTAP4-12Q9BQ66 201 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 EHD4Q9H223 541 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 LIN7BQ9HAP6 207 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 SH2B1Q9NRF2 756 aaPredicted RBP5.14□□□□□ -1.59
RIF1-212ENST00000498041 NLRP2Q9NX02 1062 aa5.14□□□□□ -1.59
RIF1-212ENST00000498041 LINC01387J3KSC0 135 aa5.13□□□□□ -1.59
RIF1-212ENST00000498041 P4HBP07237 508 aaKnown RBP5.13□□□□□ -1.59
RIF1-212ENST00000498041 ERCC3P19447 782 aa5.13□□□□□ -1.59
RIF1-212ENST00000498041 EPHA1P21709 976 aa5.13□□□□□ -1.59
RIF1-212ENST00000498041 SETDB1Q15047 1291 aa5.13□□□□□ -1.59
RIF1-212ENST00000498041 ALG1LQ6GMV1 187 aa5.13□□□□□ -1.59
RIF1-212ENST00000498041 DNAJC14Q6Y2X3 702 aaPredicted RBP5.13□□□□□ -1.59
RIF1-212ENST00000498041 EPS8L3Q8TE67 593 aaKnown RBP5.13□□□□□ -1.59
RIF1-212ENST00000498041 FBF1Q8TES7 1133 aa5.13□□□□□ -1.59
RIF1-212ENST00000498041 LENG1Q96BZ8 264 aaPredicted RBP5.13□□□□□ -1.59
RIF1-212ENST00000498041 TCF12Q99081 682 aa5.13□□□□□ -1.59
RIF1-212ENST00000498041 SOX13Q9UN79 622 aa5.13□□□□□ -1.59
RIF1-212ENST00000498041 A0A096LPE4 126 aa5.12□□□□□ -1.59
RIF1-212ENST00000498041 A0A1W2PPZ6 126 aa5.12□□□□□ -1.59
RIF1-212ENST00000498041 H3BRJ5 948 aa5.12□□□□□ -1.59
RIF1-212ENST00000498041 DEAF1O75398 565 aaPredicted RBP5.12□□□□□ -1.59
RIF1-212ENST00000498041 CDC25BP30305 580 aa5.12□□□□□ -1.59
RIF1-212ENST00000498041 IREB2P48200 963 aaKnown RBP5.12□□□□□ -1.59
RIF1-212ENST00000498041 TMCO4Q5TGY1 634 aa5.12□□□□□ -1.59
RIF1-212ENST00000498041 PPP4R2Q9NY27 417 aa5.12□□□□□ -1.59
RIF1-212ENST00000498041 TRAK1Q9UPV9 953 aa5.12□□□□□ -1.59
RIF1-212ENST00000498041 BTBD11A6QL63 1104 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 METTL12A8MUP2 240 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 DLL1O00548 723 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 FSCN2O14926 492 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 LDHBP07195 334 aaKnown RBP5.11□□□□□ -1.59
RIF1-212ENST00000498041 GRIA4P48058 902 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 PIP4K2BP78356 416 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 FGD1P98174 961 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 TRIM26Q12899 539 aaPredicted RBP5.11□□□□□ -1.59
RIF1-212ENST00000498041 GRM2Q14416 872 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.11□□□□□ -1.59
RIF1-212ENST00000498041 EAPPQ56P03 285 aaPredicted RBP5.11□□□□□ -1.59
RIF1-212ENST00000498041 PRPF40BQ6NWY9 871 aaKnown RBP5.11□□□□□ -1.59
RIF1-212ENST00000498041 TXNDC11Q6PKC3 985 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 IGF2-ASQ6U949 168 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 VN1R5Q7Z5H4 357 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 NPAS4Q8IUM7 802 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 KLHL23Q8NBE8 558 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 WNT8BQ93098 351 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 OSGEPQ9NPF4 335 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 PCMTD2Q9NV79 361 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 WWC3Q9ULE0 1092 aa5.11□□□□□ -1.59
RIF1-212ENST00000498041 SSTR4P31391 388 aa5.1□□□□□ -1.59
RIF1-212ENST00000498041 ARL4DP49703 201 aa5.1□□□□□ -1.59
RIF1-212ENST00000498041 PTPN12Q05209 780 aaKnown RBP5.1□□□□□ -1.59
RIF1-212ENST00000498041 IKBKEQ14164 716 aa5.1□□□□□ -1.59
RIF1-212ENST00000498041 SPRED3Q2MJR0 410 aa5.1□□□□□ -1.59
RIF1-212ENST00000498041 PI16Q6UXB8 463 aa5.1□□□□□ -1.59
RIF1-212ENST00000498041 GALNT11Q8NCW6 608 aa5.1□□□□□ -1.59
RIF1-212ENST00000498041 GLIS3Q8NEA6 775 aa5.1□□□□□ -1.59
RIF1-212ENST00000498041 WFDC12Q8WWY7 111 aa5.1□□□□□ -1.59
RIF1-212ENST00000498041 SETDB2Q96T68 719 aa5.1□□□□□ -1.59
RIF1-212ENST00000498041 BCO2Q9BYV7 579 aa5.1□□□□□ -1.59
RIF1-212ENST00000498041 CLEC4MQ9H2X3 399 aaPredicted RBP5.1□□□□□ -1.59
RIF1-212ENST00000498041 ABCB6Q9NP58 842 aa5.1□□□□□ -1.59
RIF1-212ENST00000498041 SEC31BQ9NQW1 1179 aa5.1□□□□□ -1.59
RIF1-212ENST00000498041 TMEM238LA0A1B0GVL6 79 aa5.09□□□□□ -1.59
RIF1-212ENST00000498041 SOX1O00570 391 aaPredicted RBP5.09□□□□□ -1.59
RIF1-212ENST00000498041 GIPC1O14908 333 aa5.09□□□□□ -1.59
RIF1-212ENST00000498041 PRPF40AO75400 957 aaKnown RBP5.09□□□□□ -1.59
RIF1-212ENST00000498041 ESRRAP11474 423 aaPredicted RBP5.09□□□□□ -1.59
RIF1-212ENST00000498041 ITPKAP23677 461 aa5.09□□□□□ -1.59
RIF1-212ENST00000498041 CD68P34810 354 aaPredicted RBP5.09□□□□□ -1.59
RIF1-212ENST00000498041 C19orf57Q0VDD7 668 aa5.09□□□□□ -1.59
RIF1-212ENST00000498041 SLC7A3Q8WY07 619 aa5.09□□□□□ -1.59
RIF1-212ENST00000498041 FRMD6Q96NE9 622 aa5.09□□□□□ -1.59
RIF1-212ENST00000498041 CARD10Q9BWT7 1032 aa5.09□□□□□ -1.59
RIF1-212ENST00000498041 ZFYVE1Q9HBF4 777 aa5.09□□□□□ -1.59
RIF1-212ENST00000498041 GOLGA2P5Q9HBQ8 144 aa5.09□□□□□ -1.59
RIF1-212ENST00000498041 SPG7Q9UQ90 795 aa5.09□□□□□ -1.59
RIF1-212ENST00000498041 TM4SF5O14894 197 aa5.08□□□□□ -1.6
RIF1-212ENST00000498041 EIF4EBP3O60516 100 aaPredicted RBP5.08□□□□□ -1.6
RIF1-212ENST00000498041 XRCC5P13010 732 aaKnown RBP5.08□□□□□ -1.6
RIF1-212ENST00000498041 NOS3P29474 1203 aa5.08□□□□□ -1.6
RIF1-212ENST00000498041 FCGRTP55899 365 aa5.08□□□□□ -1.6
RIF1-212ENST00000498041 PCDH1Q08174 1060 aa5.08□□□□□ -1.6
RIF1-212ENST00000498041 NXPE4Q6UWF7 544 aa5.08□□□□□ -1.6
RIF1-212ENST00000498041 DTHD1Q6ZMT9 781 aa5.08□□□□□ -1.6
RIF1-212ENST00000498041 KLHDC7BQ96G42 594 aa5.08□□□□□ -1.6
RIF1-212ENST00000498041 SRCIN1Q9C0H9 1055 aa5.08□□□□□ -1.6
RIF1-212ENST00000498041 MRPL18Q9H0U6 180 aaKnown RBP5.08□□□□□ -1.6
RIF1-212ENST00000498041 ZNF576Q9H609 170 aa5.08□□□□□ -1.6
RIF1-212ENST00000498041 SOX17Q9H6I2 414 aaPredicted RBP5.08□□□□□ -1.6
RIF1-212ENST00000498041 ALX3O95076 343 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms