RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 SEMA3EO15041 775 aa29.4■■■□□ 2.3
TNFRSF4-203ENST00000497869 RTKN2Q8IZC4 609 aa29.4■■■□□ 2.3
TNFRSF4-203ENST00000497869 AOC3Q16853 763 aa29.39■■■□□ 2.3
TNFRSF4-203ENST00000497869 PSMD1Q99460 953 aa29.39■■■□□ 2.3
TNFRSF4-203ENST00000497869 CHAF1AQ13111 956 aaPredicted RBP29.38■■■□□ 2.29
TNFRSF4-203ENST00000497869 EYA3Q99504 573 aa29.38■■■□□ 2.29
TNFRSF4-203ENST00000497869 NMIQ13287 307 aaPredicted RBP29.37■■■□□ 2.29
TNFRSF4-203ENST00000497869 ESYT1Q9BSJ8 1104 aa29.37■■■□□ 2.29
TNFRSF4-203ENST00000497869 COA1Q9GZY4 146 aa29.37■■■□□ 2.29
TNFRSF4-203ENST00000497869 PDS5AQ29RF7 1337 aaKnown RBP29.37■■■□□ 2.29
TNFRSF4-203ENST00000497869 A0A0D9SFI3 127 aa29.37■■■□□ 2.29
TNFRSF4-203ENST00000497869 NFKBIEO00221 500 aa29.37■■■□□ 2.29
TNFRSF4-203ENST00000497869 KIAA2012Q0VF49 1180 aa29.37■■■□□ 2.29
TNFRSF4-203ENST00000497869 CWC27Q6UX04 472 aaKnown RBP29.37■■■□□ 2.29
TNFRSF4-203ENST00000497869 DBNDD1Q9H9R9 158 aa29.37■■■□□ 2.29
TNFRSF4-203ENST00000497869 KCNQ5Q9NR82 932 aa29.37■■■□□ 2.29
TNFRSF4-203ENST00000497869 ZNF277Q9NRM2 450 aaPredicted RBP29.37■■■□□ 2.29
TNFRSF4-203ENST00000497869 COL4A5P29400 1685 aa29.36■■■□□ 2.29
TNFRSF4-203ENST00000497869 FRAT2O75474 233 aaPredicted RBP29.36■■■□□ 2.29
TNFRSF4-203ENST00000497869 GRIK5Q16478 980 aa29.36■■■□□ 2.29
TNFRSF4-203ENST00000497869 GRIPAP1Q4V328 841 aa29.36■■■□□ 2.29
TNFRSF4-203ENST00000497869 TSHZ2Q9NRE2 1034 aa29.36■■■□□ 2.29
TNFRSF4-203ENST00000497869 SEC62Q99442 399 aaKnown RBP29.35■■■□□ 2.29
TNFRSF4-203ENST00000497869 RFX7Q2KHR2 1363 aa29.35■■■□□ 2.29
TNFRSF4-203ENST00000497869 SOGA3Q5TF21 947 aa29.34■■■□□ 2.29
TNFRSF4-203ENST00000497869 ZNF384Q8TF68 577 aa29.34■■■□□ 2.29
TNFRSF4-203ENST00000497869 IDH1O75874 414 aaKnown RBP29.34■■■□□ 2.29
TNFRSF4-203ENST00000497869 TTF1Q15361 905 aaPredicted RBP29.34■■■□□ 2.29
TNFRSF4-203ENST00000497869 DIAPH3Q9NSV4 1193 aa29.34■■■□□ 2.29
TNFRSF4-203ENST00000497869 AK9Q5TCS8 1911 aa29.33■■■□□ 2.29
TNFRSF4-203ENST00000497869 PRELPP51888 382 aa29.33■■■□□ 2.29
TNFRSF4-203ENST00000497869 SUPT20HQ8NEM7 779 aa29.33■■■□□ 2.29
TNFRSF4-203ENST00000497869 ABCF2Q9UG63 623 aa29.33■■■□□ 2.29
TNFRSF4-203ENST00000497869 RNF113AO15541 343 aaKnown RBP29.32■■■□□ 2.28
TNFRSF4-203ENST00000497869 SGSM2O43147 1006 aa29.32■■■□□ 2.28
TNFRSF4-203ENST00000497869 PPIP5K2O43314 1243 aa29.32■■■□□ 2.28
TNFRSF4-203ENST00000497869 MFAP1P55081 439 aaKnown RBP29.32■■■□□ 2.28
TNFRSF4-203ENST00000497869 MYO5AQ9Y4I1 1855 aaKnown RBP29.32■■■□□ 2.28
TNFRSF4-203ENST00000497869 CHD4Q14839 1912 aa29.31■■■□□ 2.28
TNFRSF4-203ENST00000497869 TCRBV5S4A2TA0A5A2 114 aa29.31■■■□□ 2.28
TNFRSF4-203ENST00000497869 PRDX5P30044 214 aa29.31■■■□□ 2.28
TNFRSF4-203ENST00000497869 ADD2P35612 726 aa29.31■■■□□ 2.28
TNFRSF4-203ENST00000497869 PDE6AP16499 860 aa29.31■■■□□ 2.28
TNFRSF4-203ENST00000497869 ZMYM1Q5SVZ6 1142 aa29.31■■■□□ 2.28
TNFRSF4-203ENST00000497869 SLC9C2Q5TAH2 1124 aa29.31■■■□□ 2.28
TNFRSF4-203ENST00000497869 ZNF589Q86UQ0 364 aaPredicted RBP29.31■■■□□ 2.28
TNFRSF4-203ENST00000497869 OSBP2Q969R2 916 aa29.31■■■□□ 2.28
TNFRSF4-203ENST00000497869 FAM205AQ6ZU69 1335 aa29.3■■■□□ 2.28
TNFRSF4-203ENST00000497869 YDJCA8MPS7 323 aa29.3■■■□□ 2.28
TNFRSF4-203ENST00000497869 ECE2O60344 883 aa29.3■■■□□ 2.28
TNFRSF4-203ENST00000497869 GTF2IP78347 998 aa29.3■■■□□ 2.28
TNFRSF4-203ENST00000497869 CASC1Q6TDU7 716 aa29.3■■■□□ 2.28
TNFRSF4-203ENST00000497869 MXD3Q9BW11 206 aa29.3■■■□□ 2.28
TNFRSF4-203ENST00000497869 SALL1Q9NSC2 1324 aa29.3■■■□□ 2.28
TNFRSF4-203ENST00000497869 RASSF7Q02833 373 aa29.29■■■□□ 2.28
TNFRSF4-203ENST00000497869 TAOK3Q9H2K8 898 aa29.29■■■□□ 2.28
TNFRSF4-203ENST00000497869 LRP2BPQ9P2M1 347 aa29.29■■■□□ 2.28
TNFRSF4-203ENST00000497869 HIP1O00291 1037 aa29.28■■■□□ 2.28
TNFRSF4-203ENST00000497869 CCDC129Q6ZRS4 1044 aa29.28■■■□□ 2.28
TNFRSF4-203ENST00000497869 FER1L6Q2WGJ9 1857 aa29.28■■■□□ 2.28
TNFRSF4-203ENST00000497869 ZNF532Q9HCE3 1301 aa29.28■■■□□ 2.28
TNFRSF4-203ENST00000497869 DOCK2Q92608 1830 aa29.28■■■□□ 2.28
TNFRSF4-203ENST00000497869 PODNQ7Z5L7 613 aa29.28■■■□□ 2.28
TNFRSF4-203ENST00000497869 ADGRA1Q86SQ6 560 aa29.28■■■□□ 2.28
TNFRSF4-203ENST00000497869 CERS5Q8N5B7 392 aa29.28■■■□□ 2.28
TNFRSF4-203ENST00000497869 MAGEB6Q8N7X4 407 aa29.28■■■□□ 2.28
TNFRSF4-203ENST00000497869 WDR66Q8TBY9 1149 aa29.28■■■□□ 2.28
TNFRSF4-203ENST00000497869 M0R2C6 588 aa29.27■■■□□ 2.28
TNFRSF4-203ENST00000497869 TICAM2Q86XR7 235 aa29.27■■■□□ 2.28
TNFRSF4-203ENST00000497869 PUS7LQ9H0K6 701 aaKnown RBP29.27■■■□□ 2.28
TNFRSF4-203ENST00000497869 MAST3O60307 1309 aa29.27■■■□□ 2.28
TNFRSF4-203ENST00000497869 YBX3P16989 372 aaKnown RBP eCLIP29.26■■■□□ 2.27
TNFRSF4-203ENST00000497869 IARSP41252 1262 aaKnown RBP29.26■■■□□ 2.27
TNFRSF4-203ENST00000497869 MAP3K12Q12852 859 aa29.26■■■□□ 2.27
TNFRSF4-203ENST00000497869 RAI14Q9P0K7 980 aa29.26■■■□□ 2.27
TNFRSF4-203ENST00000497869 UBE3CQ15386 1083 aa29.25■■■□□ 2.27
TNFRSF4-203ENST00000497869 NSUN4Q96CB9 384 aaKnown RBP29.25■■■□□ 2.27
TNFRSF4-203ENST00000497869 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.25■■■□□ 2.27
TNFRSF4-203ENST00000497869 SCN9AQ15858 1988 aa29.25■■■□□ 2.27
TNFRSF4-203ENST00000497869 ARFGEF1Q9Y6D6 1849 aa29.25■■■□□ 2.27
TNFRSF4-203ENST00000497869 ZFYP08048 801 aaPredicted RBP29.25■■■□□ 2.27
TNFRSF4-203ENST00000497869 LARGE2Q8N3Y3 721 aa29.25■■■□□ 2.27
TNFRSF4-203ENST00000497869 G3V3G9 751 aa29.24■■■□□ 2.27
TNFRSF4-203ENST00000497869 MECOMQ03112 1051 aa29.24■■■□□ 2.27
TNFRSF4-203ENST00000497869 MCMDC2Q4G0Z9 681 aa29.24■■■□□ 2.27
TNFRSF4-203ENST00000497869 MFSD14BQ5SR56 506 aa29.24■■■□□ 2.27
TNFRSF4-203ENST00000497869 DCAF8Q5TAQ9 597 aa29.24■■■□□ 2.27
TNFRSF4-203ENST00000497869 TTLL5Q6EMB2 1281 aa29.24■■■□□ 2.27
TNFRSF4-203ENST00000497869 APPBP2Q92624 585 aa29.24■■■□□ 2.27
TNFRSF4-203ENST00000497869 LSG1Q9H089 658 aaKnown RBP29.24■■■□□ 2.27
TNFRSF4-203ENST00000497869 LTBP3Q9NS15 1303 aa29.24■■■□□ 2.27
TNFRSF4-203ENST00000497869 MYH13Q9UKX3 1938 aa29.24■■■□□ 2.27
TNFRSF4-203ENST00000497869 PTH1RQ03431 593 aa29.23■■■□□ 2.27
TNFRSF4-203ENST00000497869 ERICH6Q7L0X2 663 aa29.23■■■□□ 2.27
TNFRSF4-203ENST00000497869 USP26Q9BXU7 913 aa29.23■■■□□ 2.27
TNFRSF4-203ENST00000497869 HELLSQ9NRZ9 838 aa29.23■■■□□ 2.27
TNFRSF4-203ENST00000497869 RUFY2Q8WXA3 655 aa29.23■■■□□ 2.27
TNFRSF4-203ENST00000497869 FBXW7Q969H0 707 aa29.23■■■□□ 2.27
TNFRSF4-203ENST00000497869 VPS33BQ9H267 617 aa29.23■■■□□ 2.27
TNFRSF4-203ENST00000497869 DACT2Q5SW24 774 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms