RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CARD10Q9BWT7 1032 aa6.3□□□□□ -1.4
PSPC1-205ENST00000497722 DDX3YO15523 660 aaKnown RBP6.29□□□□□ -1.4
PSPC1-205ENST00000497722 PIP4K2BP78356 416 aa6.29□□□□□ -1.4
PSPC1-205ENST00000497722 ARHGAP4P98171 946 aa6.29□□□□□ -1.4
PSPC1-205ENST00000497722 VN1R5Q7Z5H4 357 aa6.29□□□□□ -1.4
PSPC1-205ENST00000497722 TXNDC2Q86VQ3 553 aa6.29□□□□□ -1.4
PSPC1-205ENST00000497722 BHLHE41Q9C0J9 482 aaPredicted RBP6.29□□□□□ -1.4
PSPC1-205ENST00000497722 ZFYVE28Q9HCC9 887 aa6.29□□□□□ -1.4
PSPC1-205ENST00000497722 OSGEPQ9NPF4 335 aa6.29□□□□□ -1.4
PSPC1-205ENST00000497722 SEC31BQ9NQW1 1179 aa6.29□□□□□ -1.4
PSPC1-205ENST00000497722 PHACTR2O75167 634 aa6.28□□□□□ -1.4
PSPC1-205ENST00000497722 ABL1P00519 1130 aa6.28□□□□□ -1.4
PSPC1-205ENST00000497722 IGHA2P01877 340 aa6.28□□□□□ -1.4
PSPC1-205ENST00000497722 CDC25BP30305 580 aa6.28□□□□□ -1.4
PSPC1-205ENST00000497722 SERPINB4P48594 390 aa6.28□□□□□ -1.4
PSPC1-205ENST00000497722 HGSNATQ68CP4 663 aa6.28□□□□□ -1.4
PSPC1-205ENST00000497722 ARMC10Q8N2F6 343 aa6.28□□□□□ -1.4
PSPC1-205ENST00000497722 OSMRQ99650 979 aa6.28□□□□□ -1.4
PSPC1-205ENST00000497722 EDN3P14138 238 aa6.27□□□□□ -1.41
PSPC1-205ENST00000497722 ACAD11Q709F0 780 aa6.27□□□□□ -1.41
PSPC1-205ENST00000497722 TTC16Q8NEE8 873 aa6.27□□□□□ -1.41
PSPC1-205ENST00000497722 UBASH3BQ8TF42 649 aa6.27□□□□□ -1.41
PSPC1-205ENST00000497722 FAM46AQ96IP4 442 aaKnown RBP6.27□□□□□ -1.41
PSPC1-205ENST00000497722 LATS2Q9NRM7 1088 aa6.27□□□□□ -1.41
PSPC1-205ENST00000497722 SOX1O00570 391 aaPredicted RBP6.26□□□□□ -1.41
PSPC1-205ENST00000497722 GSC2O15499 205 aa6.26□□□□□ -1.41
PSPC1-205ENST00000497722 AAMPQ13685 434 aa6.26□□□□□ -1.41
PSPC1-205ENST00000497722 B4GALNT3Q6L9W6 998 aa6.26□□□□□ -1.41
PSPC1-205ENST00000497722 FAM117BQ6P1L5 589 aa6.26□□□□□ -1.41
PSPC1-205ENST00000497722 BSNDQ8WZ55 320 aa6.26□□□□□ -1.41
PSPC1-205ENST00000497722 AMOTL2Q9Y2J4 779 aa6.26□□□□□ -1.41
PSPC1-205ENST00000497722 GLB1P16278 677 aa6.25□□□□□ -1.41
PSPC1-205ENST00000497722 DUOXA2Q1HG44 320 aa6.25□□□□□ -1.41
PSPC1-205ENST00000497722 RETREG2Q8NC44 543 aa6.25□□□□□ -1.41
PSPC1-205ENST00000497722 FAM129BQ96TA1 746 aa6.25□□□□□ -1.41
PSPC1-205ENST00000497722 MEGF11A6BM72 1044 aa6.24□□□□□ -1.41
PSPC1-205ENST00000497722 H3BRB1 525 aa6.24□□□□□ -1.41
PSPC1-205ENST00000497722 CABP4P57796 275 aa6.24□□□□□ -1.41
PSPC1-205ENST00000497722 UVSSAQ2YD98 709 aa6.24□□□□□ -1.41
PSPC1-205ENST00000497722 GALNT12Q8IXK2 581 aa6.24□□□□□ -1.41
PSPC1-205ENST00000497722 CEP41Q9BYV8 373 aa6.24□□□□□ -1.41
PSPC1-205ENST00000497722 NRSN2Q9GZP1 204 aa6.24□□□□□ -1.41
PSPC1-205ENST00000497722 TUT1Q9H6E5 874 aaKnown RBP6.24□□□□□ -1.41
PSPC1-205ENST00000497722 SOX17Q9H6I2 414 aaPredicted RBP6.24□□□□□ -1.41
PSPC1-205ENST00000497722 RAXQ9Y2V3 346 aa6.24□□□□□ -1.41
PSPC1-205ENST00000497722 POLR3DP05423 398 aaPredicted RBP6.23□□□□□ -1.41
PSPC1-205ENST00000497722 C19orf57Q0VDD7 668 aa6.23□□□□□ -1.41
PSPC1-205ENST00000497722 CCNJLQ8IV13 435 aa6.23□□□□□ -1.41
PSPC1-205ENST00000497722 TCF12Q99081 682 aa6.23□□□□□ -1.41
PSPC1-205ENST00000497722 KRTAP4-11Q9BYQ6 195 aa6.23□□□□□ -1.41
PSPC1-205ENST00000497722 A0A1W2PP55 124 aa6.22□□□□□ -1.41
PSPC1-205ENST00000497722 METTL12A8MUP2 240 aa6.22□□□□□ -1.41
PSPC1-205ENST00000497722 DLGAP3O95886 979 aa6.22□□□□□ -1.41
PSPC1-205ENST00000497722 ESRRAP11474 423 aaPredicted RBP6.22□□□□□ -1.41
PSPC1-205ENST00000497722 NLRP12P59046 1061 aa6.22□□□□□ -1.41
PSPC1-205ENST00000497722 USPL1Q5W0Q7 1092 aa6.22□□□□□ -1.41
PSPC1-205ENST00000497722 GLYCTKQ8IVS8 523 aa6.22□□□□□ -1.41
PSPC1-205ENST00000497722 MYRFLQ96LU7 910 aa6.22□□□□□ -1.41
PSPC1-205ENST00000497722 TMPRSS13Q9BYE2 586 aa6.22□□□□□ -1.41
PSPC1-205ENST00000497722 FAM177BA6PVY3 158 aa6.21□□□□□ -1.42
PSPC1-205ENST00000497722 DHX15O43143 795 aaKnown RBP6.21□□□□□ -1.42
PSPC1-205ENST00000497722 MED26O95402 600 aa6.21□□□□□ -1.42
PSPC1-205ENST00000497722 GRIK1P39086 918 aa6.21□□□□□ -1.42
PSPC1-205ENST00000497722 PREPP48147 710 aa6.21□□□□□ -1.42
PSPC1-205ENST00000497722 IKBKEQ14164 716 aa6.21□□□□□ -1.42
PSPC1-205ENST00000497722 KIAA0319Q5VV43 1072 aa6.21□□□□□ -1.42
PSPC1-205ENST00000497722 ANKRD34AQ69YU3 496 aa6.21□□□□□ -1.42
PSPC1-205ENST00000497722 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.21□□□□□ -1.42
PSPC1-205ENST00000497722 SLC7A3Q8WY07 619 aa6.21□□□□□ -1.42
PSPC1-205ENST00000497722 CITED4Q96RK1 184 aa6.21□□□□□ -1.42
PSPC1-205ENST00000497722 RNF208Q9H0X6 261 aa6.21□□□□□ -1.42
PSPC1-205ENST00000497722 BRPF3Q9ULD4 1205 aa6.21□□□□□ -1.42
PSPC1-205ENST00000497722 LOC100289279A0A1B0GTE1 492 aa6.2□□□□□ -1.42
PSPC1-205ENST00000497722 TIAF1O95411 115 aa6.2□□□□□ -1.42
PSPC1-205ENST00000497722 TGFB1P01137 390 aa6.2□□□□□ -1.42
PSPC1-205ENST00000497722 IGLV1-40P01703 118 aa6.2□□□□□ -1.42
PSPC1-205ENST00000497722 GRIA4P48058 902 aa6.2□□□□□ -1.42
PSPC1-205ENST00000497722 INTS5Q6P9B9 1019 aaKnown RBP6.2□□□□□ -1.42
PSPC1-205ENST00000497722 FAM20CQ8IXL6 584 aa6.2□□□□□ -1.42
PSPC1-205ENST00000497722 C7orf69Q9H7B7 122 aa6.2□□□□□ -1.42
PSPC1-205ENST00000497722 SUGCTQ9HAC7 445 aa6.2□□□□□ -1.42
PSPC1-205ENST00000497722 STOML1Q9UBI4 398 aa6.2□□□□□ -1.42
PSPC1-205ENST00000497722 A0A096LPE4 126 aa6.19□□□□□ -1.42
PSPC1-205ENST00000497722 A0A1W2PPZ6 126 aa6.19□□□□□ -1.42
PSPC1-205ENST00000497722 GPR182O15218 404 aa6.19□□□□□ -1.42
PSPC1-205ENST00000497722 SPINK2P20155 84 aa6.19□□□□□ -1.42
PSPC1-205ENST00000497722 ARL4DP49703 201 aa6.19□□□□□ -1.42
PSPC1-205ENST00000497722 ORC1Q13415 861 aa6.19□□□□□ -1.42
PSPC1-205ENST00000497722 ZNF423Q2M1K9 1284 aa6.19□□□□□ -1.42
PSPC1-205ENST00000497722 SPRED3Q2MJR0 410 aa6.19□□□□□ -1.42
PSPC1-205ENST00000497722 ZDHHC13Q8IUH4 622 aa6.19□□□□□ -1.42
PSPC1-205ENST00000497722 SMG8Q8ND04 991 aaKnown RBP6.19□□□□□ -1.42
PSPC1-205ENST00000497722 ASAP3Q8TDY4 903 aa6.19□□□□□ -1.42
PSPC1-205ENST00000497722 UTP4Q969X6 686 aaKnown RBP6.19□□□□□ -1.42
PSPC1-205ENST00000497722 RUSC1Q9BVN2 902 aa6.19□□□□□ -1.42
PSPC1-205ENST00000497722 NDUFB5O43674 189 aa6.18□□□□□ -1.42
PSPC1-205ENST00000497722 OGFOD2Q6N063 350 aa6.18□□□□□ -1.42
PSPC1-205ENST00000497722 CLEC10AQ8IUN9 316 aa6.18□□□□□ -1.42
PSPC1-205ENST00000497722 TRIM42Q8IWZ5 723 aa6.18□□□□□ -1.42
PSPC1-205ENST00000497722 FAM83CQ9BQN1 747 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms