RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 WFDC8Q8IUA0 241 aa11.41□□□□□ -0.58
GARNL3-221ENST00000497703 ZNF576Q9H609 170 aa11.41□□□□□ -0.58
GARNL3-221ENST00000497703 GPN3Q9UHW5 284 aaPredicted RBP11.41□□□□□ -0.58
GARNL3-221ENST00000497703 RLBP1P12271 317 aa11.4□□□□□ -0.58
GARNL3-221ENST00000497703 LYPD4Q6UWN0 246 aa11.4□□□□□ -0.58
GARNL3-221ENST00000497703 C1orf229Q6ZS94 237 aaPredicted RBP11.4□□□□□ -0.58
GARNL3-221ENST00000497703 RRAGCQ9HB90 399 aa11.4□□□□□ -0.58
GARNL3-221ENST00000497703 STARD13Q9Y3M8 1113 aa11.4□□□□□ -0.58
GARNL3-221ENST00000497703 PPME1Q9Y570 386 aa11.4□□□□□ -0.58
GARNL3-221ENST00000497703 ARL4DP49703 201 aa11.39□□□□□ -0.59
GARNL3-221ENST00000497703 FANCCQ00597 558 aa11.39□□□□□ -0.59
GARNL3-221ENST00000497703 PCDH1Q08174 1060 aa11.39□□□□□ -0.59
GARNL3-221ENST00000497703 IKBKEQ14164 716 aa11.39□□□□□ -0.59
GARNL3-221ENST00000497703 TPTE2Q6XPS3 522 aa11.39□□□□□ -0.59
GARNL3-221ENST00000497703 C20orf204Q6ZNR8 217 aa11.39□□□□□ -0.59
GARNL3-221ENST00000497703 SV2BQ7L1I2 683 aa11.39□□□□□ -0.59
GARNL3-221ENST00000497703 ANKRD24Q8TF21 1146 aa11.39□□□□□ -0.59
GARNL3-221ENST00000497703 NOC4LQ9BVI4 516 aaKnown RBP11.39□□□□□ -0.59
GARNL3-221ENST00000497703 SOX13Q9UN79 622 aa11.39□□□□□ -0.59
GARNL3-221ENST00000497703 AFF1P51825 1210 aaKnown RBP11.38□□□□□ -0.59
GARNL3-221ENST00000497703 PRDM6Q9NQX0 595 aa11.38□□□□□ -0.59
GARNL3-221ENST00000497703 GGT7Q9UJ14 662 aa11.38□□□□□ -0.59
GARNL3-221ENST00000497703 SAMM50Q9Y512 469 aa11.38□□□□□ -0.59
GARNL3-221ENST00000497703 SHISA8B8ZZ34 492 aa11.37□□□□□ -0.59
GARNL3-221ENST00000497703 H3BRJ5 948 aa11.37□□□□□ -0.59
GARNL3-221ENST00000497703 PIK3R2O00459 728 aa11.37□□□□□ -0.59
GARNL3-221ENST00000497703 ERCC5P28715 1186 aaPredicted RBP11.37□□□□□ -0.59
GARNL3-221ENST00000497703 PWP1Q13610 501 aa11.37□□□□□ -0.59
GARNL3-221ENST00000497703 LDLRAD1Q5T700 205 aa11.37□□□□□ -0.59
GARNL3-221ENST00000497703 SH2B1Q9NRF2 756 aaPredicted RBP11.37□□□□□ -0.59
GARNL3-221ENST00000497703 IGSF5Q9NSI5 407 aa11.37□□□□□ -0.59
GARNL3-221ENST00000497703 FBXO24O75426 580 aa11.36□□□□□ -0.59
GARNL3-221ENST00000497703 HDLBPQ00341 1268 aaKnown RBP11.36□□□□□ -0.59
GARNL3-221ENST00000497703 TMEM39AQ9NV64 488 aa11.36□□□□□ -0.59
GARNL3-221ENST00000497703 LMNB1P20700 586 aa11.35□□□□□ -0.59
GARNL3-221ENST00000497703 CDC25BP30305 580 aa11.35□□□□□ -0.59
GARNL3-221ENST00000497703 MSL1Q68DK7 614 aa11.35□□□□□ -0.59
GARNL3-221ENST00000497703 VN1R5Q7Z5H4 357 aa11.35□□□□□ -0.59
GARNL3-221ENST00000497703 NT5DC4Q86YG4 428 aa11.35□□□□□ -0.59
GARNL3-221ENST00000497703 DCAF11Q8TEB1 546 aa11.35□□□□□ -0.59
GARNL3-221ENST00000497703 SEC31BQ9NQW1 1179 aa11.35□□□□□ -0.59
GARNL3-221ENST00000497703 B3GALT4O96024 378 aa11.34□□□□□ -0.59
GARNL3-221ENST00000497703 EPHA1P21709 976 aa11.34□□□□□ -0.59
GARNL3-221ENST00000497703 PIP4K2BP78356 416 aa11.34□□□□□ -0.59
GARNL3-221ENST00000497703 C9orf131Q5VYM1 1079 aa11.34□□□□□ -0.59
GARNL3-221ENST00000497703 DIEXFQ68CQ4 756 aaKnown RBP11.34□□□□□ -0.59
GARNL3-221ENST00000497703 RELL1Q8IUW5 271 aa11.34□□□□□ -0.59
GARNL3-221ENST00000497703 WNT8BQ93098 351 aa11.34□□□□□ -0.59
GARNL3-221ENST00000497703 GRIK5Q16478 980 aa11.33□□□□□ -0.6
GARNL3-221ENST00000497703 LCE2CQ5TA81 110 aa11.33□□□□□ -0.6
GARNL3-221ENST00000497703 C8orf86Q6ZUL3 223 aa11.33□□□□□ -0.6
GARNL3-221ENST00000497703 MAP4K3Q8IVH8 894 aa11.33□□□□□ -0.6
GARNL3-221ENST00000497703 WHAMMQ8TF30 809 aa11.33□□□□□ -0.6
GARNL3-221ENST00000497703 SLC7A3Q8WY07 619 aa11.33□□□□□ -0.6
GARNL3-221ENST00000497703 CCSER2Q9H7U1 834 aa11.33□□□□□ -0.6
GARNL3-221ENST00000497703 SRA1Q9HD15 236 aaKnown RBP11.33□□□□□ -0.6
GARNL3-221ENST00000497703 SPDYE3A6NKU9 549 aa11.32□□□□□ -0.6
GARNL3-221ENST00000497703 LINC01387J3KSC0 135 aa11.32□□□□□ -0.6
GARNL3-221ENST00000497703 ESRRAP11474 423 aaPredicted RBP11.32□□□□□ -0.6
GARNL3-221ENST00000497703 HNRNPUQ00839 825 aaKnown RBP eCLIP11.32□□□□□ -0.6
GARNL3-221ENST00000497703 ZNF385CQ66K41 422 aaPredicted RBP11.32□□□□□ -0.6
GARNL3-221ENST00000497703 USP48Q86UV5 1035 aa11.32□□□□□ -0.6
GARNL3-221ENST00000497703 NECAB3Q96P71 396 aaPredicted RBP11.32□□□□□ -0.6
GARNL3-221ENST00000497703 ZNF157P51786 506 aaPredicted RBP11.31□□□□□ -0.6
GARNL3-221ENST00000497703 TRAPPC3LQ5T215 181 aa11.31□□□□□ -0.6
GARNL3-221ENST00000497703 SOX17Q9H6I2 414 aaPredicted RBP11.31□□□□□ -0.6
GARNL3-221ENST00000497703 DGKGP49619 791 aa11.3□□□□□ -0.6
GARNL3-221ENST00000497703 C19orf57Q0VDD7 668 aa11.3□□□□□ -0.6
GARNL3-221ENST00000497703 FAAP100Q0VG06 881 aa11.3□□□□□ -0.6
GARNL3-221ENST00000497703 METTL16Q86W50 562 aaKnown RBP11.3□□□□□ -0.6
GARNL3-221ENST00000497703 ZNF654Q8IZM8 581 aa11.3□□□□□ -0.6
GARNL3-221ENST00000497703 TGIF2Q9GZN2 237 aa11.3□□□□□ -0.6
GARNL3-221ENST00000497703 OSGEPQ9NPF4 335 aa11.3□□□□□ -0.6
GARNL3-221ENST00000497703 ENC1O14682 589 aa11.29□□□□□ -0.6
GARNL3-221ENST00000497703 RAC1P63000 192 aa11.29□□□□□ -0.6
GARNL3-221ENST00000497703 GSTM4Q03013 218 aa11.29□□□□□ -0.6
GARNL3-221ENST00000497703 AP3B2Q13367 1082 aa11.29□□□□□ -0.6
GARNL3-221ENST00000497703 MAP3K11Q16584 847 aa11.29□□□□□ -0.6
GARNL3-221ENST00000497703 ZNF423Q2M1K9 1284 aa11.29□□□□□ -0.6
GARNL3-221ENST00000497703 TXNDC11Q6PKC3 985 aa11.29□□□□□ -0.6
GARNL3-221ENST00000497703 ADAMTSL4Q6UY14 1074 aa11.29□□□□□ -0.6
GARNL3-221ENST00000497703 PODNQ7Z5L7 613 aa11.29□□□□□ -0.6
GARNL3-221ENST00000497703 DMRTC2Q8IXT2 367 aaPredicted RBP11.29□□□□□ -0.6
GARNL3-221ENST00000497703 KLHL23Q8NBE8 558 aa11.29□□□□□ -0.6
GARNL3-221ENST00000497703 RSRP1Q9BUV0 290 aa11.29□□□□□ -0.6
GARNL3-221ENST00000497703 EMILIN2Q9BXX0 1053 aa11.29□□□□□ -0.6
GARNL3-221ENST00000497703 FSCN2O14926 492 aa11.28□□□□□ -0.6
GARNL3-221ENST00000497703 WIPF1O43516 503 aa11.28□□□□□ -0.6
GARNL3-221ENST00000497703 CYP11A1P05108 521 aa11.28□□□□□ -0.6
GARNL3-221ENST00000497703 CELA3AP09093 270 aa11.28□□□□□ -0.6
GARNL3-221ENST00000497703 GBP2P32456 591 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-221ENST00000497703 BAG6P46379 1132 aa11.28□□□□□ -0.6
GARNL3-221ENST00000497703 ZC3H6P61129 1189 aaKnown RBP11.28□□□□□ -0.6
GARNL3-221ENST00000497703 LRRC14Q15048 493 aa11.28□□□□□ -0.6
GARNL3-221ENST00000497703 TTBK2Q6IQ55 1244 aa11.28□□□□□ -0.6
GARNL3-221ENST00000497703 ERMP1Q7Z2K6 904 aa11.28□□□□□ -0.6
GARNL3-221ENST00000497703 DTWD1Q8N5C7 304 aa11.28□□□□□ -0.6
GARNL3-221ENST00000497703 MKL2Q9ULH7 1088 aa11.28□□□□□ -0.6
GARNL3-221ENST00000497703 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-221ENST00000497703 SOX1O00570 391 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms