RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, human

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VIT-208	ENST00000497382	CA8	P35219	290 aa		11.13	□□□□□ -0.63
VIT-208	ENST00000497382	SFSWAP	Q12872	951 aa	Known RBP	11.13	□□□□□ -0.63
VIT-208	ENST00000497382	NFATC2IP	Q8NCF5	419 aa		11.13	□□□□□ -0.63
VIT-208	ENST00000497382	PPM1E	Q8WY54	764 aa		11.13	□□□□□ -0.63
VIT-208	ENST00000497382	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	11.13	□□□□□ -0.63
VIT-208	ENST00000497382	CCDC39	Q9UFE4	941 aa		11.13	□□□□□ -0.63
VIT-208	ENST00000497382	FAM160A1	Q05DH4	1040 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
VIT-208	ENST00000497382	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.12	□□□□□ -0.63
VIT-208	ENST00000497382	TMEM110	Q86TL2	294 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	GIMAP7	Q8NHV1	300 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	HOXC10	Q9NYD6	342 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	BARX2	Q9UMQ3	279 aa	Predicted RBP	11.12	□□□□□ -0.63
VIT-208	ENST00000497382	MYOM2	P54296	1465 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	C1orf167	Q5SNV9	1468 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	PLEKHG2	Q9H7P9	1386 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.12	□□□□□ -0.63
VIT-208	ENST00000497382	DEUP1	Q05D60	604 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
VIT-208	ENST00000497382	AGAP9	Q5VTM2	703 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	EGFLAM	Q63HQ2	1017 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	ANKRD13D	Q6ZTN6	518 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	GABPB2	Q8TAK5	448 aa	Predicted RBP	11.12	□□□□□ -0.63
VIT-208	ENST00000497382	KCNB2	Q92953	911 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	CENPT	Q96BT3	561 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	COMMD8	Q9NX08	183 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	PRAG1	Q86YV5	1406 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	DDX11L8	A8MPP1	907 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	AP1G2	O75843	785 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	HOXD10	P28358	340 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	CCDC80	Q76M96	950 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	LCA5	Q86VQ0	697 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	ARHGEF25	Q86VW2	580 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	CCAR1	Q8IX12	1150 aa	Known RBP	11.12	□□□□□ -0.63
VIT-208	ENST00000497382	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
VIT-208	ENST00000497382	KIAA1958	Q8N8K9	716 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	HDAC7	Q8WUI4	952 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	MRFAP1L1	Q96HT8	127 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	CENPO	Q9BU64	300 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382	ATP8A1	Q9Y2Q0	1164 aa		11.12	□□□□□ -0.63
VIT-208	ENST00000497382		V9GYY5	206 aa	Predicted RBP	11.12	□□□□□ -0.63
VIT-208	ENST00000497382	TRIM37	O94972	964 aa		11.11	□□□□□ -0.63
VIT-208	ENST00000497382	HARS	P12081	509 aa	Known RBP	11.11	□□□□□ -0.63
VIT-208	ENST00000497382	CHML	P26374	656 aa		11.11	□□□□□ -0.63
VIT-208	ENST00000497382	POM121	Q96HA1	1249 aa		11.11	□□□□□ -0.63
VIT-208	ENST00000497382	PABPN1L	A6NDY0	278 aa	Known RBP	11.11	□□□□□ -0.63
VIT-208	ENST00000497382	CTIF	O43310	598 aa	Known RBP	11.11	□□□□□ -0.63
VIT-208	ENST00000497382	ADAMTS2	O95450	1211 aa		11.11	□□□□□ -0.63
VIT-208	ENST00000497382	GPT2	Q8TD30	523 aa		11.11	□□□□□ -0.63
VIT-208	ENST00000497382	JARID2	Q92833	1246 aa	Predicted RBP	11.11	□□□□□ -0.63
VIT-208	ENST00000497382	FAM53C	Q9NYF3	392 aa		11.11	□□□□□ -0.63
VIT-208	ENST00000497382		E9PCH4	1651 aa		11.1	□□□□□ -0.63
VIT-208	ENST00000497382	C10orf62	Q5T681	223 aa	Predicted RBP	11.1	□□□□□ -0.63
VIT-208	ENST00000497382	FAAH2	Q6GMR7	532 aa		11.1	□□□□□ -0.63
VIT-208	ENST00000497382	RELL1	Q8IUW5	271 aa		11.1	□□□□□ -0.63
VIT-208	ENST00000497382	TBC1D5	Q92609	795 aa		11.1	□□□□□ -0.63
VIT-208	ENST00000497382	PDLIM2	Q96JY6	352 aa		11.1	□□□□□ -0.63
VIT-208	ENST00000497382	ANTXR1	Q9H6X2	564 aa		11.1	□□□□□ -0.63
VIT-208	ENST00000497382	DIAPH3	Q9NSV4	1193 aa		11.1	□□□□□ -0.63
VIT-208	ENST00000497382	RRP15	Q9Y3B9	282 aa	Known RBP	11.1	□□□□□ -0.63
VIT-208	ENST00000497382	BCL9L	Q86UU0	1499 aa		11.1	□□□□□ -0.63
VIT-208	ENST00000497382	SGSM2	O43147	1006 aa		11.1	□□□□□ -0.63
VIT-208	ENST00000497382	MYL1	P05976	194 aa		11.1	□□□□□ -0.63
VIT-208	ENST00000497382	CYP11B2	P19099	503 aa		11.1	□□□□□ -0.63
VIT-208	ENST00000497382	CCDC174	Q6PII3	467 aa		11.1	□□□□□ -0.63
VIT-208	ENST00000497382	SLC43A3	Q8NBI5	491 aa		11.1	□□□□□ -0.63
VIT-208	ENST00000497382	KIF18A	Q8NI77	898 aa		11.1	□□□□□ -0.63
VIT-208	ENST00000497382	BAG1	Q99933	345 aa	Predicted RBP	11.1	□□□□□ -0.63
VIT-208	ENST00000497382	E2F6	O75461	281 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	DDX10	Q13206	875 aa	Known RBP	11.09	□□□□□ -0.63
VIT-208	ENST00000497382	CRYM	Q14894	314 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	KRT72	Q14CN4	511 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	GJD4	Q96KN9	370 aa	Predicted RBP	11.09	□□□□□ -0.63
VIT-208	ENST00000497382	DHX36	Q9H2U1	1008 aa	Known RBP	11.09	□□□□□ -0.63
VIT-208	ENST00000497382	BRD4	O60885	1362 aa	Predicted RBP	11.09	□□□□□ -0.63
VIT-208	ENST00000497382	ANKRD50	Q9ULJ7	1429 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	ZMYND10	O75800	440 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	USP8	P40818	1118 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	ZNF131	P52739	623 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	ZBED6	P86452	979 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	DHX8	Q14562	1220 aa	Known RBP	11.09	□□□□□ -0.63
VIT-208	ENST00000497382	GAS2L3	Q86XJ1	694 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	CCDC65	Q8IXS2	484 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	NDUFAF2	Q8N183	169 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	NLGN1	Q8N2Q7	840 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	NBPF15	Q8N660	670 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	IRX2	Q9BZI1	471 aa	Predicted RBP	11.09	□□□□□ -0.63
VIT-208	ENST00000497382	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.09	□□□□□ -0.63
VIT-208	ENST00000497382	ZHX3	Q9H4I2	956 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	GPCPD1	Q9NPB8	672 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	LCMT1	Q9UIC8	334 aa		11.09	□□□□□ -0.63
VIT-208	ENST00000497382	GCFC2	P16383	781 aa	Known RBP	11.08	□□□□□ -0.64
VIT-208	ENST00000497382	SEPT2	Q15019	361 aa		11.08	□□□□□ -0.64
VIT-208	ENST00000497382	COBLL1	Q53SF7	1204 aa		11.08	□□□□□ -0.64
VIT-208	ENST00000497382	SAMD14	Q8IZD0	417 aa	Predicted RBP	11.08	□□□□□ -0.64
VIT-208	ENST00000497382	CCDC191	Q8NCU4	936 aa		11.08	□□□□□ -0.64
VIT-208	ENST00000497382	GIMAP1	Q8WWP7	306 aa		11.08	□□□□□ -0.64
VIT-208	ENST00000497382	ROCK1	Q13464	1354 aa		11.08	□□□□□ -0.64
VIT-208	ENST00000497382	BBOX1	O75936	387 aa		11.08	□□□□□ -0.64
VIT-208	ENST00000497382	CP	P00450	1065 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms