RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 KLRK1P26718 216 aa12.71□□□□□ -0.37
USP13-205ENST00000497380 MCAMP43121 646 aa12.71□□□□□ -0.37
USP13-205ENST00000497380 RASGRF1Q13972 1273 aa12.71□□□□□ -0.37
USP13-205ENST00000497380 TSHZ3Q63HK5 1081 aa12.71□□□□□ -0.37
USP13-205ENST00000497380 SPTY2D1Q68D10 685 aaPredicted RBP12.71□□□□□ -0.37
USP13-205ENST00000497380 ZSCAN25Q6NSZ9 544 aa12.71□□□□□ -0.37
USP13-205ENST00000497380 TMED8Q6PL24 325 aaPredicted RBP12.71□□□□□ -0.37
USP13-205ENST00000497380 SLC51AQ86UW1 340 aa12.71□□□□□ -0.37
USP13-205ENST00000497380 NIM1KQ8IY84 436 aa12.71□□□□□ -0.37
USP13-205ENST00000497380 TBC1D22AQ8WUA7 517 aa12.71□□□□□ -0.37
USP13-205ENST00000497380 RILPL2Q969X0 211 aa12.71□□□□□ -0.37
USP13-205ENST00000497380 GPR101Q96P66 508 aaPredicted RBP12.71□□□□□ -0.37
USP13-205ENST00000497380 DNAJC2Q99543 621 aaKnown RBP12.71□□□□□ -0.37
USP13-205ENST00000497380 ZNF277Q9NRM2 450 aaPredicted RBP12.71□□□□□ -0.37
USP13-205ENST00000497380 PAG1Q9NWQ8 432 aa12.71□□□□□ -0.37
USP13-205ENST00000497380 HMG20BQ9P0W2 317 aa12.71□□□□□ -0.37
USP13-205ENST00000497380 DUOX1Q9NRD9 1551 aa12.7□□□□□ -0.38
USP13-205ENST00000497380 NFKBIEO00221 500 aa12.7□□□□□ -0.38
USP13-205ENST00000497380 HIP1O00291 1037 aa12.7□□□□□ -0.38
USP13-205ENST00000497380 ZAP70P43403 619 aa12.7□□□□□ -0.38
USP13-205ENST00000497380 DOK7Q18PE1 504 aa12.7□□□□□ -0.38
USP13-205ENST00000497380 CASC1Q6TDU7 716 aa12.7□□□□□ -0.38
USP13-205ENST00000497380 SKAP1Q86WV1 359 aa12.7□□□□□ -0.38
USP13-205ENST00000497380 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.7□□□□□ -0.38
USP13-205ENST00000497380 ZNRF3Q9ULT6 936 aa12.7□□□□□ -0.38
USP13-205ENST00000497380 FER1L6Q2WGJ9 1857 aa12.7□□□□□ -0.38
USP13-205ENST00000497380 FAM205AQ6ZU69 1335 aa12.69□□□□□ -0.38
USP13-205ENST00000497380 GOLIM4O00461 696 aa12.69□□□□□ -0.38
USP13-205ENST00000497380 ECE2O60344 883 aa12.69□□□□□ -0.38
USP13-205ENST00000497380 SDSP20132 328 aa12.69□□□□□ -0.38
USP13-205ENST00000497380 LMNB1P20700 586 aa12.69□□□□□ -0.38
USP13-205ENST00000497380 MAP3K12Q12852 859 aa12.69□□□□□ -0.38
USP13-205ENST00000497380 STRIP1Q5VSL9 837 aa12.69□□□□□ -0.38
USP13-205ENST00000497380 KBTBD3Q8NAB2 608 aa12.69□□□□□ -0.38
USP13-205ENST00000497380 SNRKQ9NRH2 765 aa12.69□□□□□ -0.38
USP13-205ENST00000497380 IQSEC3Q9UPP2 1182 aaPredicted RBP12.69□□□□□ -0.38
USP13-205ENST00000497380 SALL1Q9NSC2 1324 aa12.68□□□□□ -0.38
USP13-205ENST00000497380 USP17L3A6NCW0 530 aa12.68□□□□□ -0.38
USP13-205ENST00000497380 USP17L4A6NCW7 530 aa12.68□□□□□ -0.38
USP13-205ENST00000497380 ZFYP08048 801 aaPredicted RBP12.68□□□□□ -0.38
USP13-205ENST00000497380 GSPT1P15170 499 aaKnown RBP12.68□□□□□ -0.38
USP13-205ENST00000497380 YBX3P16989 372 aaKnown RBP eCLIP12.68□□□□□ -0.38
USP13-205ENST00000497380 FKBP1AP62942 108 aaKnown RBP12.68□□□□□ -0.38
USP13-205ENST00000497380 GTF2IP78347 998 aa12.68□□□□□ -0.38
USP13-205ENST00000497380 CHAF1AQ13111 956 aaPredicted RBP12.68□□□□□ -0.38
USP13-205ENST00000497380 SCARF1Q14162 830 aa12.68□□□□□ -0.38
USP13-205ENST00000497380 TTLL5Q6EMB2 1281 aa12.68□□□□□ -0.38
USP13-205ENST00000497380 USP17L1Q7RTZ2 530 aa12.68□□□□□ -0.38
USP13-205ENST00000497380 FSD1Q9BTV5 496 aa12.68□□□□□ -0.38
USP13-205ENST00000497380 DBNDD1Q9H9R9 158 aa12.68□□□□□ -0.38
USP13-205ENST00000497380 LRP2BPQ9P2M1 347 aa12.68□□□□□ -0.38
USP13-205ENST00000497380 SUGT1Q9Y2Z0 365 aa12.68□□□□□ -0.38
USP13-205ENST00000497380 MAP4K4O95819 1239 aaPredicted RBP12.67□□□□□ -0.38
USP13-205ENST00000497380 CYP2E1P05181 493 aaPredicted RBP12.67□□□□□ -0.38
USP13-205ENST00000497380 EIF6P56537 245 aaKnown RBP12.67□□□□□ -0.38
USP13-205ENST00000497380 RASSF7Q02833 373 aa12.67□□□□□ -0.38
USP13-205ENST00000497380 TNIP1Q15025 636 aa12.67□□□□□ -0.38
USP13-205ENST00000497380 ERICH6Q7L0X2 663 aa12.67□□□□□ -0.38
USP13-205ENST00000497380 SLF2Q8IX21 1173 aa12.67□□□□□ -0.38
USP13-205ENST00000497380 FBXW7Q969H0 707 aa12.67□□□□□ -0.38
USP13-205ENST00000497380 ABCF2Q9UG63 623 aa12.67□□□□□ -0.38
USP13-205ENST00000497380 RFX7Q2KHR2 1363 aa12.67□□□□□ -0.38
USP13-205ENST00000497380 MYO3BQ8WXR4 1341 aa12.66□□□□□ -0.38
USP13-205ENST00000497380 CDC45O75419 566 aa12.66□□□□□ -0.38
USP13-205ENST00000497380 IDH1O75874 414 aaKnown RBP12.66□□□□□ -0.38
USP13-205ENST00000497380 LDHBP07195 334 aaKnown RBP12.66□□□□□ -0.38
USP13-205ENST00000497380 MFSD14BQ5SR56 506 aa12.66□□□□□ -0.38
USP13-205ENST00000497380 PI16Q6UXB8 463 aa12.66□□□□□ -0.38
USP13-205ENST00000497380 RUFY2Q8WXA3 655 aa12.66□□□□□ -0.38
USP13-205ENST00000497380 GPBP1L1Q9HC44 474 aaPredicted RBP12.66□□□□□ -0.38
USP13-205ENST00000497380 RAI14Q9P0K7 980 aa12.66□□□□□ -0.38
USP13-205ENST00000497380 MAST3O60307 1309 aa12.65□□□□□ -0.38
USP13-205ENST00000497380 LDHCP07864 332 aa12.65□□□□□ -0.38
USP13-205ENST00000497380 MMP14P50281 582 aa12.65□□□□□ -0.38
USP13-205ENST00000497380 GSTO1P78417 241 aa12.65□□□□□ -0.38
USP13-205ENST00000497380 CIAPIN1Q6FI81 312 aa12.65□□□□□ -0.38
USP13-205ENST00000497380 ANTXR1Q9H6X2 564 aa12.65□□□□□ -0.38
USP13-205ENST00000497380 DIAPH3Q9NSV4 1193 aa12.65□□□□□ -0.38
USP13-205ENST00000497380 NDUFB9Q9Y6M9 179 aa12.65□□□□□ -0.38
USP13-205ENST00000497380 AKAP11Q9UKA4 1901 aa12.64□□□□□ -0.39
USP13-205ENST00000497380 MYH13Q9UKX3 1938 aa12.64□□□□□ -0.39
USP13-205ENST00000497380 FZD9O00144 591 aa12.64□□□□□ -0.39
USP13-205ENST00000497380 RNF113AO15541 343 aaKnown RBP12.64□□□□□ -0.39
USP13-205ENST00000497380 VIL1P09327 827 aaKnown RBP12.64□□□□□ -0.39
USP13-205ENST00000497380 UBE3CQ15386 1083 aa12.64□□□□□ -0.39
USP13-205ENST00000497380 SLC9C2Q5TAH2 1124 aa12.64□□□□□ -0.39
USP13-205ENST00000497380 DZIP1Q86YF9 867 aaKnown RBP12.64□□□□□ -0.39
USP13-205ENST00000497380 EDC3Q96F86 508 aaKnown RBP12.64□□□□□ -0.39
USP13-205ENST00000497380 YDJCA8MPS7 323 aa12.63□□□□□ -0.39
USP13-205ENST00000497380 MFAP1P55081 439 aaKnown RBP12.63□□□□□ -0.39
USP13-205ENST00000497380 DACT2Q5SW24 774 aa12.63□□□□□ -0.39
USP13-205ENST00000497380 NAA16Q6N069 864 aaPredicted RBP12.63□□□□□ -0.39
USP13-205ENST00000497380 RSBN1LQ6PCB5 846 aaPredicted RBP12.63□□□□□ -0.39
USP13-205ENST00000497380 TBC1D9Q6ZT07 1266 aa12.63□□□□□ -0.39
USP13-205ENST00000497380 CERS3Q8IU89 383 aa12.63□□□□□ -0.39
USP13-205ENST00000497380 AGBL3Q8NEM8 1001 aa12.63□□□□□ -0.39
USP13-205ENST00000497380 NOL10Q9BSC4 688 aaKnown RBP12.63□□□□□ -0.39
USP13-205ENST00000497380 MRIQ9BWK5 157 aa12.63□□□□□ -0.39
USP13-205ENST00000497380 PIH1D3Q9NQM4 214 aaKnown RBP12.63□□□□□ -0.39
USP13-205ENST00000497380 RNF181Q9P0P0 153 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms