RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TCERG1O14776 1098 aaKnown RBP3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 NRDCO43847 1150 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 PSAPP07602 524 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 SELPP16109 830 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 ARID4AP29374 1257 aaPredicted RBP3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 GPLD1P80108 840 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 MYBPC2Q14324 1141 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 CCDC96Q2M329 555 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 NBPF9Q3BBW0 867 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 TMC7Q7Z402 723 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 PODNQ7Z5L7 613 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 EPS8L3Q8TE67 593 aaKnown RBP3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 FAM161BQ96MY7 647 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 SOWAHDA6NJG2 315 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 DLL1O00548 723 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 FBXO24O75426 580 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 WISP1O95388 367 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 ECEL1O95672 775 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 NRG1Q02297 640 aaPredicted RBP3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 HSP90AB3PQ58FF7 597 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 ABTB2Q8N961 1025 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 OR13H1Q8NG92 308 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 KCNK4Q9NYG8 393 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 SALL4Q9UJQ4 1053 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 GPC6Q9Y625 555 aaPredicted RBP3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 FAM181BA6NEQ2 426 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 NFKBIEO00221 500 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 GNB5O14775 395 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 NME8Q8N427 588 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 OTUD6BQ8N6M0 293 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 MICAL1Q8TDZ2 1067 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 PROCP04070 461 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 MZF1P28698 734 aaPredicted RBP3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 GRIA4P48058 902 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 NLRP12P59046 1061 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 RALBP1Q15311 655 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 HIF1AQ16665 826 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 APBB1IPQ7Z5R6 666 aaPredicted RBP3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 GJD3Q8N144 294 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 IL22RA1Q8N6P7 574 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 DRC1Q96MC2 740 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 HIRIP3Q9BW71 556 aaPredicted RBP3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 IGSF5Q9NSI5 407 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 DZANK1Q9NVP4 752 aa3.94□□□□□ -1.78
SNRNP48-202ENST00000496946 A0A0A0MRY4 1105 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 PHF20L1A8MW92 1017 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 GOLIM4O00461 696 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 EGFRP00533 1210 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 FURINP09958 794 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 ERCC3P19447 782 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 MAPK8P45983 427 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 TTC39BQ5VTQ0 682 aaPredicted RBP3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 TAF3Q5VWG9 929 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 SCARF2Q96GP6 870 aaPredicted RBP3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 SPOCK3Q9BQ16 436 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 PHACTR2O75167 634 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 PEX14O75381 377 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 DLGAP3O95886 979 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 GHRHP01286 108 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 CALRP27797 417 aaKnown RBP3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 MAPK1P28482 360 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 SPRED3Q2MJR0 410 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 MSL1Q68DK7 614 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 OSMRQ99650 979 aa3.93□□□□□ -1.78
SNRNP48-202ENST00000496946 F6X3S4 739 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 ANP32CO43423 234 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 ADAM11O75078 769 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 FAM13AO94988 1023 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 DOC2BQ14184 412 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 SETDB1Q15047 1291 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 ZNF662Q6ZS27 426 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 ARMCX6Q7L4S7 300 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 SDR16C5Q8N3Y7 309 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 MTA3Q9BTC8 594 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 ZC3H12CQ9C0D7 883 aaKnown RBP3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 PDCL3Q9H2J4 239 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 AVENQ9NQS1 362 aaPredicted RBP3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 USP21Q9UK80 565 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 WASHC2CQ9Y4E1 1318 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 NRLP54845 237 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 HDAC1Q13547 482 aaPredicted RBP3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 PDE12Q6L8Q7 609 aaKnown RBP3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 SMAP1Q8IYB5 467 aaPredicted RBP3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 TMEM151AQ8N4L1 468 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 SPACA7Q96KW9 195 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 MUC3BQ9H195 1237 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 SUGT1Q9Y2Z0 365 aa3.92□□□□□ -1.78
SNRNP48-202ENST00000496946 VGLL3A8MV65 326 aa3.91□□□□□ -1.78
SNRNP48-202ENST00000496946 CCER2I3L3R5 266 aa3.91□□□□□ -1.78
SNRNP48-202ENST00000496946 EIF1AYO14602 144 aaKnown RBP3.91□□□□□ -1.78
SNRNP48-202ENST00000496946 RAB11FIP3O75154 756 aa3.91□□□□□ -1.78
SNRNP48-202ENST00000496946 MAP3K6O95382 1288 aa3.91□□□□□ -1.78
SNRNP48-202ENST00000496946 NPR3P17342 541 aa3.91□□□□□ -1.78
SNRNP48-202ENST00000496946 POLD1P28340 1107 aa3.91□□□□□ -1.78
SNRNP48-202ENST00000496946 DIEXFQ68CQ4 756 aaKnown RBP3.91□□□□□ -1.78
SNRNP48-202ENST00000496946 FMR1NBQ8N0W7 255 aaPredicted RBP3.91□□□□□ -1.78
SNRNP48-202ENST00000496946 TTC16Q8NEE8 873 aa3.91□□□□□ -1.78
SNRNP48-202ENST00000496946 MRRFQ96E11 262 aaKnown RBP3.91□□□□□ -1.78
SNRNP48-202ENST00000496946 KLHDC7BQ96G42 594 aa3.91□□□□□ -1.78
SNRNP48-202ENST00000496946 TSPAN18Q96SJ8 248 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms