RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 MBTPS1Q14703 1052 aa8.77□□□□□ -1
SNX13-211ENST00000496855 SPRED3Q2MJR0 410 aa8.77□□□□□ -1
SNX13-211ENST00000496855 PI16Q6UXB8 463 aa8.77□□□□□ -1
SNX13-211ENST00000496855 OSGEPQ9NPF4 335 aa8.77□□□□□ -1
SNX13-211ENST00000496855 ANKRD33BA6NCL7 494 aa8.77□□□□□ -1.01
SNX13-211ENST00000496855 P4HBP07237 508 aaKnown RBP8.77□□□□□ -1.01
SNX13-211ENST00000496855 GRM2Q14416 872 aa8.77□□□□□ -1.01
SNX13-211ENST00000496855 FOXD4L6Q3SYB3 417 aaPredicted RBP8.77□□□□□ -1.01
SNX13-211ENST00000496855 PRPF40BQ6NWY9 871 aaKnown RBP8.77□□□□□ -1.01
SNX13-211ENST00000496855 FOXD4L3Q6VB84 417 aaPredicted RBP8.77□□□□□ -1.01
SNX13-211ENST00000496855 SLC7A3Q8WY07 619 aa8.77□□□□□ -1.01
SNX13-211ENST00000496855 KLHDC7BQ96G42 594 aa8.77□□□□□ -1.01
SNX13-211ENST00000496855 MRPL18Q9H0U6 180 aaKnown RBP8.77□□□□□ -1.01
SNX13-211ENST00000496855 TRAK1Q9UPV9 953 aa8.77□□□□□ -1.01
SNX13-211ENST00000496855 SOX1O00570 391 aaPredicted RBP8.76□□□□□ -1.01
SNX13-211ENST00000496855 CCDC27Q2M243 656 aa8.76□□□□□ -1.01
SNX13-211ENST00000496855 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.76□□□□□ -1.01
SNX13-211ENST00000496855 DNAJC14Q6Y2X3 702 aaPredicted RBP8.76□□□□□ -1.01
SNX13-211ENST00000496855 FBF1Q8TES7 1133 aa8.76□□□□□ -1.01
SNX13-211ENST00000496855 ABCB6Q9NP58 842 aa8.76□□□□□ -1.01
SNX13-211ENST00000496855 ZBTB7CA1YPR0 619 aa8.75□□□□□ -1.01
SNX13-211ENST00000496855 ESRRAP11474 423 aaPredicted RBP8.75□□□□□ -1.01
SNX13-211ENST00000496855 ITPKAP23677 461 aa8.75□□□□□ -1.01
SNX13-211ENST00000496855 ARL4DP49703 201 aa8.75□□□□□ -1.01
SNX13-211ENST00000496855 C19orf57Q0VDD7 668 aa8.75□□□□□ -1.01
SNX13-211ENST00000496855 COL19A1Q14993 1142 aa8.75□□□□□ -1.01
SNX13-211ENST00000496855 SUZ12Q15022 739 aaKnown RBP8.75□□□□□ -1.01
SNX13-211ENST00000496855 HGSNATQ68CP4 663 aa8.75□□□□□ -1.01
SNX13-211ENST00000496855 ALG1LQ6GMV1 187 aa8.75□□□□□ -1.01
SNX13-211ENST00000496855 TXNRD3Q86VQ6 643 aa8.75□□□□□ -1.01
SNX13-211ENST00000496855 GLIS3Q8NEA6 775 aa8.75□□□□□ -1.01
SNX13-211ENST00000496855 SETDB2Q96T68 719 aa8.75□□□□□ -1.01
SNX13-211ENST00000496855 CLEC4MQ9H2X3 399 aaPredicted RBP8.75□□□□□ -1.01
SNX13-211ENST00000496855 KCNK4Q9NYG8 393 aa8.75□□□□□ -1.01
SNX13-211ENST00000496855 WWC3Q9ULE0 1092 aa8.75□□□□□ -1.01
SNX13-211ENST00000496855 TMEM238LA0A1B0GVL6 79 aa8.74□□□□□ -1.01
SNX13-211ENST00000496855 ATP2B2Q01814 1243 aa8.74□□□□□ -1.01
SNX13-211ENST00000496855 TMEM130Q8N3G9 435 aa8.74□□□□□ -1.01
SNX13-211ENST00000496855 SOX17Q9H6I2 414 aaPredicted RBP8.74□□□□□ -1.01
SNX13-211ENST00000496855 DDX3YO15523 660 aaKnown RBP8.73□□□□□ -1.01
SNX13-211ENST00000496855 ADAM11O75078 769 aa8.73□□□□□ -1.01
SNX13-211ENST00000496855 PTPN12Q05209 780 aaKnown RBP8.73□□□□□ -1.01
SNX13-211ENST00000496855 PCDH1Q08174 1060 aa8.73□□□□□ -1.01
SNX13-211ENST00000496855 WFDC12Q8WWY7 111 aa8.73□□□□□ -1.01
SNX13-211ENST00000496855 BCO2Q9BYV7 579 aa8.73□□□□□ -1.01
SNX13-211ENST00000496855 F8W735 103 aaPredicted RBP8.72□□□□□ -1.01
SNX13-211ENST00000496855 LDHBP07195 334 aaKnown RBP8.72□□□□□ -1.01
SNX13-211ENST00000496855 ZNF423Q2M1K9 1284 aa8.72□□□□□ -1.01
SNX13-211ENST00000496855 FOXD4L4Q8WXT5 416 aaPredicted RBP8.72□□□□□ -1.01
SNX13-211ENST00000496855 ZNF576Q9H609 170 aa8.72□□□□□ -1.01
SNX13-211ENST00000496855 PPP4R2Q9NY27 417 aa8.72□□□□□ -1.01
SNX13-211ENST00000496855 WISP1O95388 367 aa8.71□□□□□ -1.01
SNX13-211ENST00000496855 NOS3P29474 1203 aa8.71□□□□□ -1.01
SNX13-211ENST00000496855 IREB2P48200 963 aaKnown RBP8.71□□□□□ -1.01
SNX13-211ENST00000496855 NLRP12P59046 1061 aa8.71□□□□□ -1.01
SNX13-211ENST00000496855 NXPE4Q6UWF7 544 aa8.71□□□□□ -1.01
SNX13-211ENST00000496855 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.71□□□□□ -1.01
SNX13-211ENST00000496855 NPAS4Q8IUM7 802 aa8.71□□□□□ -1.01
SNX13-211ENST00000496855 AKTIPQ9H8T0 292 aa8.71□□□□□ -1.01
SNX13-211ENST00000496855 DUOXA2Q1HG44 320 aa8.7□□□□□ -1.02
SNX13-211ENST00000496855 ACAD11Q709F0 780 aa8.7□□□□□ -1.02
SNX13-211ENST00000496855 ALX3O95076 343 aa8.7□□□□□ -1.02
SNX13-211ENST00000496855 FCGRTP55899 365 aa8.7□□□□□ -1.02
SNX13-211ENST00000496855 EAPPQ56P03 285 aaPredicted RBP8.7□□□□□ -1.02
SNX13-211ENST00000496855 UBASH3BQ8TF42 649 aa8.7□□□□□ -1.02
SNX13-211ENST00000496855 EIF4EBP3O60516 100 aaPredicted RBP8.69□□□□□ -1.02
SNX13-211ENST00000496855 B3GALT4O96024 378 aa8.69□□□□□ -1.02
SNX13-211ENST00000496855 XRCC5P13010 732 aaKnown RBP8.69□□□□□ -1.02
SNX13-211ENST00000496855 GSTM4Q03013 218 aa8.69□□□□□ -1.02
SNX13-211ENST00000496855 DOC2BQ14184 412 aa8.69□□□□□ -1.02
SNX13-211ENST00000496855 RPS26P11Q5JNZ5 115 aaPredicted RBP8.69□□□□□ -1.02
SNX13-211ENST00000496855 DTHD1Q6ZMT9 781 aa8.69□□□□□ -1.02
SNX13-211ENST00000496855 KIAA1211Q6ZU35 1233 aa8.69□□□□□ -1.02
SNX13-211ENST00000496855 AGGF1Q8N302 714 aaeCLIP8.69□□□□□ -1.02
SNX13-211ENST00000496855 SRCIN1Q9C0H9 1055 aa8.69□□□□□ -1.02
SNX13-211ENST00000496855 TPSG1Q9NRR2 321 aa8.69□□□□□ -1.02
SNX13-211ENST00000496855 GIPC1O14908 333 aa8.68□□□□□ -1.02
SNX13-211ENST00000496855 PRPF40AO75400 957 aaKnown RBP8.68□□□□□ -1.02
SNX13-211ENST00000496855 ERCC3P19447 782 aa8.68□□□□□ -1.02
SNX13-211ENST00000496855 FGD1P98174 961 aa8.68□□□□□ -1.02
SNX13-211ENST00000496855 SSBP4Q9BWG4 385 aaPredicted RBP8.68□□□□□ -1.02
SNX13-211ENST00000496855 OSBPL7Q9BZF2 842 aa8.68□□□□□ -1.02
SNX13-211ENST00000496855 ZFYVE1Q9HBF4 777 aa8.68□□□□□ -1.02
SNX13-211ENST00000496855 SPG7Q9UQ90 795 aa8.68□□□□□ -1.02
SNX13-211ENST00000496855 Q6ZS46 218 aa8.67□□□□□ -1.02
SNX13-211ENST00000496855 MEGF10Q96KG7 1140 aa8.67□□□□□ -1.02
SNX13-211ENST00000496855 FAAP100Q0VG06 881 aa8.66□□□□□ -1.02
SNX13-211ENST00000496855 TMCO4Q5TGY1 634 aa8.66□□□□□ -1.02
SNX13-211ENST00000496855 DDX54Q8TDD1 881 aaKnown RBP8.66□□□□□ -1.02
SNX13-211ENST00000496855 FRMD6Q96NE9 622 aa8.66□□□□□ -1.02
SNX13-211ENST00000496855 USP26Q9BXU7 913 aa8.66□□□□□ -1.02
SNX13-211ENST00000496855 NRSN2Q9GZP1 204 aa8.66□□□□□ -1.02
SNX13-211ENST00000496855 LOC100289279A0A1B0GTE1 492 aa8.65□□□□□ -1.02
SNX13-211ENST00000496855 GLB1P16278 677 aa8.65□□□□□ -1.02
SNX13-211ENST00000496855 DZIP1LQ8IYY4 767 aaKnown RBP8.65□□□□□ -1.02
SNX13-211ENST00000496855 C3orf58Q8NDZ4 430 aa8.65□□□□□ -1.02
SNX13-211ENST00000496855 CYP11A1P05108 521 aa8.64□□□□□ -1.03
SNX13-211ENST00000496855 GNA15P30679 374 aa8.64□□□□□ -1.03
SNX13-211ENST00000496855 GSTT1P30711 240 aa8.64□□□□□ -1.03
SNX13-211ENST00000496855 FBXO33Q7Z6M2 555 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms