RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 PSAPL1Q6NUJ1 521 aa8.49□□□□□ -1.05
SSR3-208ENST00000496050 FCHSD1Q86WN1 690 aa8.49□□□□□ -1.05
SSR3-208ENST00000496050 NECAB3Q96P71 396 aaPredicted RBP8.49□□□□□ -1.05
SSR3-208ENST00000496050 COL25A1Q9BXS0 654 aaPredicted RBP8.49□□□□□ -1.05
SSR3-208ENST00000496050 MUC3BQ9H195 1237 aa8.49□□□□□ -1.05
SSR3-208ENST00000496050 GPN3Q9UHW5 284 aaPredicted RBP8.49□□□□□ -1.05
SSR3-208ENST00000496050 SAMM50Q9Y512 469 aa8.49□□□□□ -1.05
SSR3-208ENST00000496050 VSIG8P0DPA2 414 aa8.48□□□□□ -1.05
SSR3-208ENST00000496050 CABP4P57796 275 aa8.48□□□□□ -1.05
SSR3-208ENST00000496050 ARID5AQ03989 594 aa8.48□□□□□ -1.05
SSR3-208ENST00000496050 MAP3K11Q16584 847 aa8.48□□□□□ -1.05
SSR3-208ENST00000496050 DDX54Q8TDD1 881 aaKnown RBP8.48□□□□□ -1.05
SSR3-208ENST00000496050 MDFIQ99750 246 aa8.48□□□□□ -1.05
SSR3-208ENST00000496050 LPIN3Q9BQK8 851 aa8.48□□□□□ -1.05
SSR3-208ENST00000496050 SPON2Q9BUD6 331 aa8.48□□□□□ -1.05
SSR3-208ENST00000496050 TANGO6Q9C0B7 1094 aa8.48□□□□□ -1.05
SSR3-208ENST00000496050 PRKAG2Q9UGJ0 569 aa8.48□□□□□ -1.05
SSR3-208ENST00000496050 SHROOM4Q9ULL8 1493 aa8.47□□□□□ -1.05
SSR3-208ENST00000496050 ENC1O14682 589 aa8.47□□□□□ -1.05
SSR3-208ENST00000496050 TERTO14746 1132 aaKnown RBP8.47□□□□□ -1.05
SSR3-208ENST00000496050 CDC27P30260 824 aa8.47□□□□□ -1.05
SSR3-208ENST00000496050 EIF4A3P38919 411 aaKnown RBP8.47□□□□□ -1.05
SSR3-208ENST00000496050 SRSF11Q05519 484 aaKnown RBP8.47□□□□□ -1.05
SSR3-208ENST00000496050 PCDH1Q08174 1060 aa8.47□□□□□ -1.05
SSR3-208ENST00000496050 UBXN4Q92575 508 aa8.47□□□□□ -1.05
SSR3-208ENST00000496050 GMLQ99445 158 aa8.47□□□□□ -1.05
SSR3-208ENST00000496050 TRIM56Q9BRZ2 755 aaKnown RBP8.47□□□□□ -1.05
SSR3-208ENST00000496050 LACRTQ9GZZ8 138 aa8.47□□□□□ -1.05
SSR3-208ENST00000496050 SOX13Q9UN79 622 aa8.47□□□□□ -1.05
SSR3-208ENST00000496050 TRIM33Q9UPN9 1127 aa8.47□□□□□ -1.05
SSR3-208ENST00000496050 EIF4EBP3O60516 100 aaPredicted RBP8.46□□□□□ -1.06
SSR3-208ENST00000496050 ATP2B1P20020 1258 aa8.46□□□□□ -1.06
SSR3-208ENST00000496050 LMNB1P20700 586 aa8.46□□□□□ -1.06
SSR3-208ENST00000496050 LIG3P49916 1009 aa8.46□□□□□ -1.06
SSR3-208ENST00000496050 ZNF157P51786 506 aaPredicted RBP8.46□□□□□ -1.06
SSR3-208ENST00000496050 FAAP100Q0VG06 881 aa8.46□□□□□ -1.06
SSR3-208ENST00000496050 PAK2Q13177 524 aa8.46□□□□□ -1.06
SSR3-208ENST00000496050 GDF6Q6KF10 455 aaPredicted RBP8.46□□□□□ -1.06
SSR3-208ENST00000496050 VN1R5Q7Z5H4 357 aa8.46□□□□□ -1.06
SSR3-208ENST00000496050 PHC3Q8NDX5 983 aa8.46□□□□□ -1.06
SSR3-208ENST00000496050 SPATA32Q96LK8 384 aa8.46□□□□□ -1.06
SSR3-208ENST00000496050 NAGPAQ9UK23 515 aa8.46□□□□□ -1.06
SSR3-208ENST00000496050 CELA3AP09093 270 aa8.45□□□□□ -1.06
SSR3-208ENST00000496050 DNAJA1P31689 397 aaKnown RBP8.45□□□□□ -1.06
SSR3-208ENST00000496050 GJA8P48165 433 aa8.45□□□□□ -1.06
SSR3-208ENST00000496050 RPS26P62854 115 aaKnown RBP8.45□□□□□ -1.06
SSR3-208ENST00000496050 IKBKEQ14164 716 aa8.45□□□□□ -1.06
SSR3-208ENST00000496050 ZNF423Q2M1K9 1284 aa8.45□□□□□ -1.06
SSR3-208ENST00000496050 RNFT1Q5M7Z0 435 aa8.45□□□□□ -1.06
SSR3-208ENST00000496050 DIEXFQ68CQ4 756 aaKnown RBP8.45□□□□□ -1.06
SSR3-208ENST00000496050 TTBK2Q6IQ55 1244 aa8.45□□□□□ -1.06
SSR3-208ENST00000496050 SLCO4C1Q6ZQN7 724 aa8.45□□□□□ -1.06
SSR3-208ENST00000496050 KIAA0825Q8IV33 1275 aa8.45□□□□□ -1.06
SSR3-208ENST00000496050 ZNF296Q8WUU4 475 aaPredicted RBP8.45□□□□□ -1.06
SSR3-208ENST00000496050 NUDT8Q8WV74 236 aa8.45□□□□□ -1.06
SSR3-208ENST00000496050 IRF7Q92985 503 aa8.45□□□□□ -1.06
SSR3-208ENST00000496050 GPRASP2Q96D09 838 aa8.45□□□□□ -1.06
SSR3-208ENST00000496050 B3GALT4O96024 378 aa8.44□□□□□ -1.06
SSR3-208ENST00000496050 EPXP11678 715 aa8.44□□□□□ -1.06
SSR3-208ENST00000496050 LMNB2Q03252 620 aa8.44□□□□□ -1.06
SSR3-208ENST00000496050 NFX1Q12986 1120 aaKnown RBP8.44□□□□□ -1.06
SSR3-208ENST00000496050 CAMK2GQ13555 558 aaPredicted RBP8.44□□□□□ -1.06
SSR3-208ENST00000496050 LRRC14Q15048 493 aa8.44□□□□□ -1.06
SSR3-208ENST00000496050 AGMOQ6ZNB7 445 aa8.44□□□□□ -1.06
SSR3-208ENST00000496050 SH2B1Q9NRF2 756 aaPredicted RBP8.44□□□□□ -1.06
SSR3-208ENST00000496050 ADAMTS1Q9UHI8 967 aa8.44□□□□□ -1.06
SSR3-208ENST00000496050 CYP8B1Q9UNU6 501 aa8.44□□□□□ -1.06
SSR3-208ENST00000496050 F6X3S4 739 aa8.43□□□□□ -1.06
SSR3-208ENST00000496050 PF4P02776 101 aa8.43□□□□□ -1.06
SSR3-208ENST00000496050 NME2P22392 152 aa8.43□□□□□ -1.06
SSR3-208ENST00000496050 ARL4DP49703 201 aa8.43□□□□□ -1.06
SSR3-208ENST00000496050 KANK3Q6NY19 840 aa8.43□□□□□ -1.06
SSR3-208ENST00000496050 FAM117BQ6P1L5 589 aa8.43□□□□□ -1.06
SSR3-208ENST00000496050 IL22RA1Q8N6P7 574 aa8.43□□□□□ -1.06
SSR3-208ENST00000496050 EMILIN2Q9BXX0 1053 aa8.43□□□□□ -1.06
SSR3-208ENST00000496050 JPH1Q9HDC5 661 aaPredicted RBP8.43□□□□□ -1.06
SSR3-208ENST00000496050 TLR6Q9Y2C9 796 aa8.43□□□□□ -1.06
SSR3-208ENST00000496050 SUPT16HQ9Y5B9 1047 aaKnown RBP8.43□□□□□ -1.06
SSR3-208ENST00000496050 PAGE1O75459 146 aa8.42□□□□□ -1.06
SSR3-208ENST00000496050 ESRRAP11474 423 aaPredicted RBP8.42□□□□□ -1.06
SSR3-208ENST00000496050 BMP6P22004 513 aa8.42□□□□□ -1.06
SSR3-208ENST00000496050 ARNTP27540 789 aa8.42□□□□□ -1.06
SSR3-208ENST00000496050 PCNX4Q63HM2 1172 aa8.42□□□□□ -1.06
SSR3-208ENST00000496050 FBXL19Q6PCT2 694 aa8.42□□□□□ -1.06
SSR3-208ENST00000496050 CCDC84Q86UT8 332 aaPredicted RBP8.42□□□□□ -1.06
SSR3-208ENST00000496050 GALNT6Q8NCL4 622 aa8.42□□□□□ -1.06
SSR3-208ENST00000496050 RASGRP4Q8TDF6 673 aa8.42□□□□□ -1.06
SSR3-208ENST00000496050 EDARADDQ8WWZ3 215 aa8.42□□□□□ -1.06
SSR3-208ENST00000496050 ACDQ96AP0 544 aa8.42□□□□□ -1.06
SSR3-208ENST00000496050 NT5C1AQ9BXI3 368 aa8.42□□□□□ -1.06
SSR3-208ENST00000496050 STARD13Q9Y3M8 1113 aa8.42□□□□□ -1.06
SSR3-208ENST00000496050 PPME1Q9Y570 386 aa8.42□□□□□ -1.06
SSR3-208ENST00000496050 ROBO2Q9HCK4 1378 aa8.41□□□□□ -1.06
SSR3-208ENST00000496050 H3BRJ5 948 aa8.41□□□□□ -1.06
SSR3-208ENST00000496050 SOX1O00570 391 aaPredicted RBP8.41□□□□□ -1.06
SSR3-208ENST00000496050 GREM1O60565 184 aa8.41□□□□□ -1.06
SSR3-208ENST00000496050 LILRB5O75023 590 aa8.41□□□□□ -1.06
SSR3-208ENST00000496050 ADAMTS2O95450 1211 aa8.41□□□□□ -1.06
SSR3-208ENST00000496050 ATF4P18848 351 aaPredicted RBP8.41□□□□□ -1.06
SSR3-208ENST00000496050 SNAP47Q5SQN1 464 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms