RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 ATP5JP18859 108 aa18.89■□□□□ 0.61
RAPGEF3-215ENST00000495953 MX1P20591 662 aa18.89■□□□□ 0.61
RAPGEF3-215ENST00000495953 EIF6P56537 245 aaKnown RBP18.89■□□□□ 0.61
RAPGEF3-215ENST00000495953 C16orf71Q8IYS4 520 aaPredicted RBP18.89■□□□□ 0.61
RAPGEF3-215ENST00000495953 BCL11AQ9H165 835 aa18.89■□□□□ 0.61
RAPGEF3-215ENST00000495953 STAP2Q9UGK3 403 aa18.89■□□□□ 0.61
RAPGEF3-215ENST00000495953 GTF3C3Q9Y5Q9 886 aa18.89■□□□□ 0.61
RAPGEF3-215ENST00000495953 FAM205AQ6ZU69 1335 aa18.89■□□□□ 0.61
RAPGEF3-215ENST00000495953 SALL3Q9BXA9 1300 aa18.89■□□□□ 0.61
RAPGEF3-215ENST00000495953 WDR90Q96KV7 1748 aa18.88■□□□□ 0.61
RAPGEF3-215ENST00000495953 AKAP11Q9UKA4 1901 aa18.88■□□□□ 0.61
RAPGEF3-215ENST00000495953 SCN9AQ15858 1988 aa18.88■□□□□ 0.61
RAPGEF3-215ENST00000495953 YDJCA8MPS7 323 aa18.88■□□□□ 0.61
RAPGEF3-215ENST00000495953 TNIP1Q15025 636 aa18.88■□□□□ 0.61
RAPGEF3-215ENST00000495953 STRIP1Q5VSL9 837 aa18.88■□□□□ 0.61
RAPGEF3-215ENST00000495953 AOX1Q06278 1338 aa18.88■□□□□ 0.61
RAPGEF3-215ENST00000495953 USP17L3A6NCW0 530 aa18.87■□□□□ 0.61
RAPGEF3-215ENST00000495953 USP17L4A6NCW7 530 aa18.87■□□□□ 0.61
RAPGEF3-215ENST00000495953 FKBP1AP62942 108 aaKnown RBP18.87■□□□□ 0.61
RAPGEF3-215ENST00000495953 TTLL5Q6EMB2 1281 aa18.87■□□□□ 0.61
RAPGEF3-215ENST00000495953 CIAPIN1Q6FI81 312 aa18.87■□□□□ 0.61
RAPGEF3-215ENST00000495953 USP17L1Q7RTZ2 530 aa18.87■□□□□ 0.61
RAPGEF3-215ENST00000495953 RBM46Q8TBY0 533 aaKnown RBP18.87■□□□□ 0.61
RAPGEF3-215ENST00000495953 WDR66Q8TBY9 1149 aa18.87■□□□□ 0.61
RAPGEF3-215ENST00000495953 TBC1D22AQ8WUA7 517 aa18.87■□□□□ 0.61
RAPGEF3-215ENST00000495953 ZNF541Q9H0D2 1346 aa18.87■□□□□ 0.61
RAPGEF3-215ENST00000495953 OSBPL3Q9H4L5 887 aa18.87■□□□□ 0.61
RAPGEF3-215ENST00000495953 ZNF646O15015 1829 aaPredicted RBP18.86■□□□□ 0.61
RAPGEF3-215ENST00000495953 GLTPD2A6NH11 291 aa18.86■□□□□ 0.61
RAPGEF3-215ENST00000495953 POTECB2RU33 542 aa18.86■□□□□ 0.61
RAPGEF3-215ENST00000495953 PDE1AP54750 535 aa18.86■□□□□ 0.61
RAPGEF3-215ENST00000495953 CXCL9Q07325 125 aa18.86■□□□□ 0.61
RAPGEF3-215ENST00000495953 RASGRF1Q13972 1273 aa18.86■□□□□ 0.61
RAPGEF3-215ENST00000495953 SPATA5Q8NB90 893 aa18.86■□□□□ 0.61
RAPGEF3-215ENST00000495953 MYO3BQ8WXR4 1341 aa18.85■□□□□ 0.61
RAPGEF3-215ENST00000495953 IGSF3O75054 1194 aa18.85■□□□□ 0.61
RAPGEF3-215ENST00000495953 GLRX3O76003 335 aaKnown RBP18.85■□□□□ 0.61
RAPGEF3-215ENST00000495953 VIL1P09327 827 aaKnown RBP18.85■□□□□ 0.61
RAPGEF3-215ENST00000495953 MCAMP43121 646 aa18.85■□□□□ 0.61
RAPGEF3-215ENST00000495953 GTF2IP78347 998 aa18.85■□□□□ 0.61
RAPGEF3-215ENST00000495953 DPY19L2Q6NUT2 758 aa18.85■□□□□ 0.61
RAPGEF3-215ENST00000495953 PLEKHM2Q8IWE5 1019 aa18.85■□□□□ 0.61
RAPGEF3-215ENST00000495953 ZGPATQ8N5A5 531 aaKnown RBP18.85■□□□□ 0.61
RAPGEF3-215ENST00000495953 OTUD7AQ8TE49 926 aaPredicted RBP18.85■□□□□ 0.61
RAPGEF3-215ENST00000495953 HMG20BQ9P0W2 317 aa18.85■□□□□ 0.61
RAPGEF3-215ENST00000495953 IQSEC3Q9UPP2 1182 aaPredicted RBP18.85■□□□□ 0.61
RAPGEF3-215ENST00000495953 SALL1Q9NSC2 1324 aa18.84■□□□□ 0.61
RAPGEF3-215ENST00000495953 DDNO94850 711 aaPredicted RBP18.84■□□□□ 0.61
RAPGEF3-215ENST00000495953 APLP1P51693 650 aa18.84■□□□□ 0.61
RAPGEF3-215ENST00000495953 GPC2Q8N158 579 aa18.84■□□□□ 0.61
RAPGEF3-215ENST00000495953 KCNQ5Q9NR82 932 aa18.84■□□□□ 0.61
RAPGEF3-215ENST00000495953 PSMD14O00487 310 aa18.83■□□□□ 0.6
RAPGEF3-215ENST00000495953 RAD17O75943 681 aa18.83■□□□□ 0.6
RAPGEF3-215ENST00000495953 RPS12P25398 132 aaKnown RBP18.83■□□□□ 0.6
RAPGEF3-215ENST00000495953 PDE4AP27815 886 aa18.83■□□□□ 0.6
RAPGEF3-215ENST00000495953 MMP14P50281 582 aa18.83■□□□□ 0.6
RAPGEF3-215ENST00000495953 DACT2Q5SW24 774 aa18.83■□□□□ 0.6
RAPGEF3-215ENST00000495953 AGBL3Q8NEM8 1001 aa18.83■□□□□ 0.6
RAPGEF3-215ENST00000495953 HAUS7Q99871 368 aa18.83■□□□□ 0.6
RAPGEF3-215ENST00000495953 SUGT1Q9Y2Z0 365 aa18.83■□□□□ 0.6
RAPGEF3-215ENST00000495953 CHAF1AQ13111 956 aaPredicted RBP18.82■□□□□ 0.6
RAPGEF3-215ENST00000495953 SCARF1Q14162 830 aa18.82■□□□□ 0.6
RAPGEF3-215ENST00000495953 TTF1Q15361 905 aaPredicted RBP18.82■□□□□ 0.6
RAPGEF3-215ENST00000495953 SPTY2D1Q68D10 685 aaPredicted RBP18.82■□□□□ 0.6
RAPGEF3-215ENST00000495953 RSBN1LQ6PCB5 846 aaPredicted RBP18.82■□□□□ 0.6
RAPGEF3-215ENST00000495953 PI4K2BQ8TCG2 481 aa18.82■□□□□ 0.6
RAPGEF3-215ENST00000495953 FBXW7Q969H0 707 aa18.82■□□□□ 0.6
RAPGEF3-215ENST00000495953 BOLA2Q9H3K6 86 aa18.82■□□□□ 0.6
RAPGEF3-215ENST00000495953 COL1A1P02452 1464 aaPredicted RBP18.82■□□□□ 0.6
RAPGEF3-215ENST00000495953 FSTL1Q12841 308 aa18.81■□□□□ 0.6
RAPGEF3-215ENST00000495953 MFSD14BQ5SR56 506 aa18.81■□□□□ 0.6
RAPGEF3-215ENST00000495953 DOCK2Q92608 1830 aa18.8■□□□□ 0.6
RAPGEF3-215ENST00000495953 ZAP70P43403 619 aa18.8■□□□□ 0.6
RAPGEF3-215ENST00000495953 TMED8Q6PL24 325 aaPredicted RBP18.8■□□□□ 0.6
RAPGEF3-215ENST00000495953 DPF2Q92785 391 aa18.8■□□□□ 0.6
RAPGEF3-215ENST00000495953 SNRKQ9NRH2 765 aa18.8■□□□□ 0.6
RAPGEF3-215ENST00000495953 CYP2E1P05181 493 aaPredicted RBP18.79■□□□□ 0.6
RAPGEF3-215ENST00000495953 POTEIP0CG38 1075 aa18.79■□□□□ 0.6
RAPGEF3-215ENST00000495953 POTEJP0CG39 1038 aa18.79■□□□□ 0.6
RAPGEF3-215ENST00000495953 VEGFAP15692 232 aaPredicted RBP18.79■□□□□ 0.6
RAPGEF3-215ENST00000495953 TSHZ3Q63HK5 1081 aa18.79■□□□□ 0.6
RAPGEF3-215ENST00000495953 PI16Q6UXB8 463 aa18.79■□□□□ 0.6
RAPGEF3-215ENST00000495953 GMLQ99445 158 aa18.79■□□□□ 0.6
RAPGEF3-215ENST00000495953 DNAJC2Q99543 621 aaKnown RBP18.79■□□□□ 0.6
RAPGEF3-215ENST00000495953 PAG1Q9NWQ8 432 aa18.79■□□□□ 0.6
RAPGEF3-215ENST00000495953 GJA3Q9Y6H8 435 aa18.79■□□□□ 0.6
RAPGEF3-215ENST00000495953 SCN4AP35499 1836 aa18.79■□□□□ 0.6
RAPGEF3-215ENST00000495953 MAST3O60307 1309 aa18.78■□□□□ 0.6
RAPGEF3-215ENST00000495953 LDHBP07195 334 aaKnown RBP18.78■□□□□ 0.6
RAPGEF3-215ENST00000495953 ERICH6Q7L0X2 663 aa18.78■□□□□ 0.6
RAPGEF3-215ENST00000495953 TICAM2Q86XR7 235 aa18.78■□□□□ 0.6
RAPGEF3-215ENST00000495953 GOLIM4O00461 696 aa18.77■□□□□ 0.6
RAPGEF3-215ENST00000495953 CERS5Q8N5B7 392 aa18.77■□□□□ 0.6
RAPGEF3-215ENST00000495953 SMC1BQ8NDV3 1235 aa18.77■□□□□ 0.6
RAPGEF3-215ENST00000495953 L3MBTL3Q96JM7 780 aaPredicted RBP18.77■□□□□ 0.6
RAPGEF3-215ENST00000495953 MRIQ9BWK5 157 aa18.77■□□□□ 0.6
RAPGEF3-215ENST00000495953 LRP2BPQ9P2M1 347 aa18.77■□□□□ 0.6
RAPGEF3-215ENST00000495953 ABCF2Q9UG63 623 aa18.77■□□□□ 0.6
RAPGEF3-215ENST00000495953 JAG2Q9Y219 1238 aa18.77■□□□□ 0.6
RAPGEF3-215ENST00000495953 MYO5AQ9Y4I1 1855 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms