RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 COL14A1Q05707 1796 aaKnown RBP10.48□□□□□ -0.73
EPHA4-213ENST00000495693 J3QL48 77 aa10.48□□□□□ -0.73
EPHA4-213ENST00000495693 GRM8O00222 908 aa10.48□□□□□ -0.73
EPHA4-213ENST00000495693 HSP90AA1P07900 732 aaKnown RBP10.48□□□□□ -0.73
EPHA4-213ENST00000495693 SDSP20132 328 aa10.48□□□□□ -0.73
EPHA4-213ENST00000495693 ANAPC15P60006 121 aa10.48□□□□□ -0.73
EPHA4-213ENST00000495693 OS9Q13438 667 aaPredicted RBP10.48□□□□□ -0.73
EPHA4-213ENST00000495693 AGERQ15109 404 aa10.48□□□□□ -0.73
EPHA4-213ENST00000495693 CHRNA2Q15822 529 aa10.48□□□□□ -0.73
EPHA4-213ENST00000495693 TRAF7Q6Q0C0 670 aa10.48□□□□□ -0.73
EPHA4-213ENST00000495693 PPP1R42Q7Z4L9 355 aa10.48□□□□□ -0.73
EPHA4-213ENST00000495693 CNTROBQ8N137 903 aa10.48□□□□□ -0.73
EPHA4-213ENST00000495693 NFATC2IPQ8NCF5 419 aa10.48□□□□□ -0.73
EPHA4-213ENST00000495693 CDCA7Q9BWT1 371 aaPredicted RBP10.48□□□□□ -0.73
EPHA4-213ENST00000495693 EXOC6BQ9Y2D4 811 aa10.48□□□□□ -0.73
EPHA4-213ENST00000495693 SALL3Q9BXA9 1300 aa10.48□□□□□ -0.73
EPHA4-213ENST00000495693 COL22A1Q8NFW1 1626 aaPredicted RBP10.47□□□□□ -0.73
EPHA4-213ENST00000495693 PNMA6EA0A0J9YXQ4 647 aa10.47□□□□□ -0.73
EPHA4-213ENST00000495693 HIP1O00291 1037 aa10.47□□□□□ -0.73
EPHA4-213ENST00000495693 CYP27B1O15528 508 aa10.47□□□□□ -0.73
EPHA4-213ENST00000495693 KCNQ3O43525 872 aa10.47□□□□□ -0.73
EPHA4-213ENST00000495693 GLRX3O76003 335 aaKnown RBP10.47□□□□□ -0.73
EPHA4-213ENST00000495693 NFKBIBQ15653 356 aa10.47□□□□□ -0.73
EPHA4-213ENST00000495693 CTC1Q2NKJ3 1217 aa10.47□□□□□ -0.73
EPHA4-213ENST00000495693 RHPN1Q8TCX5 695 aa10.47□□□□□ -0.73
EPHA4-213ENST00000495693 RUFY2Q8WXA3 655 aa10.47□□□□□ -0.73
EPHA4-213ENST00000495693 DDX17Q92841 729 aaKnown RBP10.47□□□□□ -0.73
EPHA4-213ENST00000495693 METTL22Q9BUU2 404 aaPredicted RBP10.47□□□□□ -0.73
EPHA4-213ENST00000495693 USP42Q9H9J4 1324 aaKnown RBP10.47□□□□□ -0.73
EPHA4-213ENST00000495693 LRP6O75581 1613 aa10.47□□□□□ -0.73
EPHA4-213ENST00000495693 K7ELQ4 463 aaPredicted RBP10.46□□□□□ -0.73
EPHA4-213ENST00000495693 ALDH1A1P00352 501 aa10.46□□□□□ -0.73
EPHA4-213ENST00000495693 SMCPP49901 116 aaPredicted RBP10.46□□□□□ -0.73
EPHA4-213ENST00000495693 PTK2Q05397 1052 aa10.46□□□□□ -0.73
EPHA4-213ENST00000495693 TICAM2Q86XR7 235 aa10.46□□□□□ -0.73
EPHA4-213ENST00000495693 SNRKQ9NRH2 765 aa10.46□□□□□ -0.73
EPHA4-213ENST00000495693 MAP4K5Q9Y4K4 846 aa10.46□□□□□ -0.73
EPHA4-213ENST00000495693 PAPPAQ13219 1627 aa10.46□□□□□ -0.74
EPHA4-213ENST00000495693 PLCH1Q4KWH8 1693 aa10.46□□□□□ -0.74
EPHA4-213ENST00000495693 UBR2Q8IWV8 1755 aa10.45□□□□□ -0.74
EPHA4-213ENST00000495693 C5P01031 1676 aa10.45□□□□□ -0.74
EPHA4-213ENST00000495693 NBPF7P0C2Y1 421 aaPredicted RBP10.45□□□□□ -0.74
EPHA4-213ENST00000495693 G3BP1Q13283 466 aaKnown RBP eCLIP10.45□□□□□ -0.74
EPHA4-213ENST00000495693 PLBD2Q8NHP8 589 aa10.45□□□□□ -0.74
EPHA4-213ENST00000495693 ZNF496Q96IT1 587 aaPredicted RBP10.45□□□□□ -0.74
EPHA4-213ENST00000495693 OCSTAMPQ9BR26 566 aa10.45□□□□□ -0.74
EPHA4-213ENST00000495693 ARHGAP9Q9BRR9 750 aa10.45□□□□□ -0.74
EPHA4-213ENST00000495693 TLL2Q9Y6L7 1015 aa10.45□□□□□ -0.74
EPHA4-213ENST00000495693 TNS2Q63HR2 1409 aa10.44□□□□□ -0.74
EPHA4-213ENST00000495693 NEURL1BA8MQ27 555 aa10.44□□□□□ -0.74
EPHA4-213ENST00000495693 SMARCA5O60264 1052 aaPredicted RBP10.44□□□□□ -0.74
EPHA4-213ENST00000495693 IFIT2P09913 472 aaKnown RBP10.44□□□□□ -0.74
EPHA4-213ENST00000495693 C16orf71Q8IYS4 520 aaPredicted RBP10.44□□□□□ -0.74
EPHA4-213ENST00000495693 GBP4Q96PP9 640 aa10.44□□□□□ -0.74
EPHA4-213ENST00000495693 USP26Q9BXU7 913 aa10.44□□□□□ -0.74
EPHA4-213ENST00000495693 CWC22Q9HCG8 908 aaKnown RBP10.44□□□□□ -0.74
EPHA4-213ENST00000495693 NDUFB9Q9Y6M9 179 aa10.44□□□□□ -0.74
EPHA4-213ENST00000495693 ADH1CP00326 375 aa10.43□□□□□ -0.74
EPHA4-213ENST00000495693 SLC39A6Q13433 755 aa10.43□□□□□ -0.74
EPHA4-213ENST00000495693 GCKRQ14397 625 aa10.43□□□□□ -0.74
EPHA4-213ENST00000495693 ERFEQ4G0M1 354 aa10.43□□□□□ -0.74
EPHA4-213ENST00000495693 COPS6Q7L5N1 327 aa10.43□□□□□ -0.74
EPHA4-213ENST00000495693 XAGE3Q8WTP9 111 aa10.43□□□□□ -0.74
EPHA4-213ENST00000495693 ANTXR1Q9H6X2 564 aa10.43□□□□□ -0.74
EPHA4-213ENST00000495693 ECHDC1Q9NTX5 307 aa10.43□□□□□ -0.74
EPHA4-213ENST00000495693 TMOD3Q9NYL9 352 aa10.43□□□□□ -0.74
EPHA4-213ENST00000495693 THRAP3Q9Y2W1 955 aaKnown RBP10.43□□□□□ -0.74
EPHA4-213ENST00000495693 TUBGCP6Q96RT7 1819 aa10.42□□□□□ -0.74
EPHA4-213ENST00000495693 RAD50Q92878 1312 aa10.42□□□□□ -0.74
EPHA4-213ENST00000495693 GOLGA6L22H0YM25 854 aa10.42□□□□□ -0.74
EPHA4-213ENST00000495693 GPR37L1O60883 481 aa10.42□□□□□ -0.74
EPHA4-213ENST00000495693 AIMP1Q12904 312 aaKnown RBP10.42□□□□□ -0.74
EPHA4-213ENST00000495693 KIAA1211Q6ZU35 1233 aa10.42□□□□□ -0.74
EPHA4-213ENST00000495693 RILPL2Q969X0 211 aa10.42□□□□□ -0.74
EPHA4-213ENST00000495693 IL17RAQ96F46 866 aa10.42□□□□□ -0.74
EPHA4-213ENST00000495693 ESYT1Q9BSJ8 1104 aa10.42□□□□□ -0.74
EPHA4-213ENST00000495693 SLKQ9H2G2 1235 aaPredicted RBP10.42□□□□□ -0.74
EPHA4-213ENST00000495693 CDV3Q9UKY7 258 aaKnown RBP10.42□□□□□ -0.74
EPHA4-213ENST00000495693 WASF2Q9Y6W5 498 aa10.42□□□□□ -0.74
EPHA4-213ENST00000495693 RFX7Q2KHR2 1363 aa10.41□□□□□ -0.74
EPHA4-213ENST00000495693 MAGEB6P1A0A0J9YX57 407 aa10.41□□□□□ -0.74
EPHA4-213ENST00000495693 STARD3NLO95772 234 aa10.41□□□□□ -0.74
EPHA4-213ENST00000495693 MYL6BP14649 208 aa10.41□□□□□ -0.74
EPHA4-213ENST00000495693 CHMLP26374 656 aa10.41□□□□□ -0.74
EPHA4-213ENST00000495693 NUCB2P80303 420 aa10.41□□□□□ -0.74
EPHA4-213ENST00000495693 NR5A1Q13285 461 aa10.41□□□□□ -0.74
EPHA4-213ENST00000495693 PROSER3Q2NL68 480 aa10.41□□□□□ -0.74
EPHA4-213ENST00000495693 HSP90AB3PQ58FF7 597 aa10.41□□□□□ -0.74
EPHA4-213ENST00000495693 EVI5LQ96CN4 794 aa10.41□□□□□ -0.74
EPHA4-213ENST00000495693 MYD88Q99836 296 aa10.41□□□□□ -0.74
EPHA4-213ENST00000495693 STRN4Q9NRL3 753 aa10.41□□□□□ -0.74
EPHA4-213ENST00000495693 ARFGEF2Q9Y6D5 1785 aa10.41□□□□□ -0.74
EPHA4-213ENST00000495693 ROBO1Q9Y6N7 1651 aa10.41□□□□□ -0.74
EPHA4-213ENST00000495693 KCPQ6ZWJ8 1503 aa10.4□□□□□ -0.74
EPHA4-213ENST00000495693 ANXA1P04083 346 aa10.4□□□□□ -0.74
EPHA4-213ENST00000495693 GRM5P41594 1212 aa10.4□□□□□ -0.74
EPHA4-213ENST00000495693 CWF19L2Q2TBE0 894 aaKnown RBP10.4□□□□□ -0.74
EPHA4-213ENST00000495693 RABL6Q3YEC7 729 aaPredicted RBP10.4□□□□□ -0.74
EPHA4-213ENST00000495693 ZBTB33Q86T24 672 aa10.4□□□□□ -0.74
EPHA4-213ENST00000495693 CCDC191Q8NCU4 936 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms