RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 TMEM130Q8N3G9 435 aa9.52□□□□□ -0.89
NCKAP1-208ENST00000495619 CARD10Q9BWT7 1032 aa9.52□□□□□ -0.89
NCKAP1-208ENST00000495619 AKTIPQ9H8T0 292 aa9.52□□□□□ -0.89
NCKAP1-208ENST00000495619 PNMA6FA0A0J9YX94 578 aa9.51□□□□□ -0.89
NCKAP1-208ENST00000495619 MAPK8P45983 427 aa9.51□□□□□ -0.89
NCKAP1-208ENST00000495619 FGD1P98174 961 aa9.51□□□□□ -0.89
NCKAP1-208ENST00000495619 ENOX2Q16206 610 aaKnown RBP9.51□□□□□ -0.89
NCKAP1-208ENST00000495619 DUOXA2Q1HG44 320 aa9.51□□□□□ -0.89
NCKAP1-208ENST00000495619 ALG1LQ6GMV1 187 aa9.5□□□□□ -0.89
NCKAP1-208ENST00000495619 GALNT11Q8NCW6 608 aa9.5□□□□□ -0.89
NCKAP1-208ENST00000495619 FBF1Q8TES7 1133 aa9.5□□□□□ -0.89
NCKAP1-208ENST00000495619 WFDC12Q8WWY7 111 aa9.5□□□□□ -0.89
NCKAP1-208ENST00000495619 CLEC4MQ9H2X3 399 aaPredicted RBP9.5□□□□□ -0.89
NCKAP1-208ENST00000495619 SOX17Q9H6I2 414 aaPredicted RBP9.5□□□□□ -0.89
NCKAP1-208ENST00000495619 VN1R5Q7Z5H4 357 aa9.49□□□□□ -0.89
NCKAP1-208ENST00000495619 KLHDC7BQ96G42 594 aa9.49□□□□□ -0.89
NCKAP1-208ENST00000495619 TCF12Q99081 682 aa9.49□□□□□ -0.89
NCKAP1-208ENST00000495619 ZBTB7CA1YPR0 619 aa9.48□□□□□ -0.89
NCKAP1-208ENST00000495619 IREB2P48200 963 aaKnown RBP9.48□□□□□ -0.89
NCKAP1-208ENST00000495619 PTPN12Q05209 780 aaKnown RBP9.48□□□□□ -0.89
NCKAP1-208ENST00000495619 ADAMTSL4Q6UY14 1074 aa9.48□□□□□ -0.89
NCKAP1-208ENST00000495619 ACAD11Q709F0 780 aa9.48□□□□□ -0.89
NCKAP1-208ENST00000495619 EPS8L3Q8TE67 593 aaKnown RBP9.48□□□□□ -0.89
NCKAP1-208ENST00000495619 METTL12A8MUP2 240 aa9.47□□□□□ -0.89
NCKAP1-208ENST00000495619 F8W735 103 aaPredicted RBP9.47□□□□□ -0.89
NCKAP1-208ENST00000495619 SOX1O00570 391 aaPredicted RBP9.47□□□□□ -0.89
NCKAP1-208ENST00000495619 ESRRAP11474 423 aaPredicted RBP9.47□□□□□ -0.89
NCKAP1-208ENST00000495619 FMR1Q06787 632 aaKnown RBP eCLIP9.47□□□□□ -0.89
NCKAP1-208ENST00000495619 PCDH1Q08174 1060 aa9.47□□□□□ -0.89
NCKAP1-208ENST00000495619 DOC2BQ14184 412 aa9.47□□□□□ -0.89
NCKAP1-208ENST00000495619 PRPF40BQ6NWY9 871 aaKnown RBP9.47□□□□□ -0.89
NCKAP1-208ENST00000495619 CEP41Q9BYV8 373 aa9.47□□□□□ -0.89
NCKAP1-208ENST00000495619 XRCC5P13010 732 aaKnown RBP9.46□□□□□ -0.9
NCKAP1-208ENST00000495619 GRIA4P48058 902 aa9.46□□□□□ -0.9
NCKAP1-208ENST00000495619 GSTM4Q03013 218 aa9.46□□□□□ -0.9
NCKAP1-208ENST00000495619 SPRED3Q2MJR0 410 aa9.46□□□□□ -0.9
NCKAP1-208ENST00000495619 FOXD4L6Q3SYB3 417 aaPredicted RBP9.46□□□□□ -0.9
NCKAP1-208ENST00000495619 HP1BP3Q5SSJ5 553 aaPredicted RBP9.46□□□□□ -0.9
NCKAP1-208ENST00000495619 FOXD4L3Q6VB84 417 aaPredicted RBP9.46□□□□□ -0.9
NCKAP1-208ENST00000495619 GZF1Q9H116 711 aaPredicted RBP9.46□□□□□ -0.9
NCKAP1-208ENST00000495619 TMEM238LA0A1B0GVL6 79 aa9.45□□□□□ -0.9
NCKAP1-208ENST00000495619 GIPC1O14908 333 aa9.45□□□□□ -0.9
NCKAP1-208ENST00000495619 GLB1P16278 677 aa9.45□□□□□ -0.9
NCKAP1-208ENST00000495619 ITPKAP23677 461 aa9.45□□□□□ -0.9
NCKAP1-208ENST00000495619 NOS3P29474 1203 aa9.45□□□□□ -0.9
NCKAP1-208ENST00000495619 NLRP12P59046 1061 aa9.45□□□□□ -0.9
NCKAP1-208ENST00000495619 GRM2Q14416 872 aa9.45□□□□□ -0.9
NCKAP1-208ENST00000495619 COL19A1Q14993 1142 aa9.45□□□□□ -0.9
NCKAP1-208ENST00000495619 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.45□□□□□ -0.9
NCKAP1-208ENST00000495619 RPS26P11Q5JNZ5 115 aaPredicted RBP9.45□□□□□ -0.9
NCKAP1-208ENST00000495619 DTHD1Q6ZMT9 781 aa9.45□□□□□ -0.9
NCKAP1-208ENST00000495619 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.45□□□□□ -0.9
NCKAP1-208ENST00000495619 SPG7Q9UQ90 795 aa9.45□□□□□ -0.9
NCKAP1-208ENST00000495619 CYP11A1P05108 521 aa9.44□□□□□ -0.9
NCKAP1-208ENST00000495619 CCDC27Q2M243 656 aa9.44□□□□□ -0.9
NCKAP1-208ENST00000495619 TP53INP1Q96A56 240 aa9.44□□□□□ -0.9
NCKAP1-208ENST00000495619 FRMD6Q96NE9 622 aa9.44□□□□□ -0.9
NCKAP1-208ENST00000495619 BCO2Q9BYV7 579 aa9.44□□□□□ -0.9
NCKAP1-208ENST00000495619 SRCIN1Q9C0H9 1055 aa9.44□□□□□ -0.9
NCKAP1-208ENST00000495619 TPSG1Q9NRR2 321 aa9.44□□□□□ -0.9
NCKAP1-208ENST00000495619 ANKRD33BA6NCL7 494 aa9.43□□□□□ -0.9
NCKAP1-208ENST00000495619 ERCC3P19447 782 aa9.43□□□□□ -0.9
NCKAP1-208ENST00000495619 HNRNPUQ00839 825 aaKnown RBP eCLIP9.43□□□□□ -0.9
NCKAP1-208ENST00000495619 RUSC1Q9BVN2 902 aa9.43□□□□□ -0.9
NCKAP1-208ENST00000495619 USP26Q9BXU7 913 aa9.43□□□□□ -0.9
NCKAP1-208ENST00000495619 RNF208Q9H0X6 261 aa9.43□□□□□ -0.9
NCKAP1-208ENST00000495619 ZNF576Q9H609 170 aa9.43□□□□□ -0.9
NCKAP1-208ENST00000495619 ABCB6Q9NP58 842 aa9.43□□□□□ -0.9
NCKAP1-208ENST00000495619 KCNK4Q9NYG8 393 aa9.43□□□□□ -0.9
NCKAP1-208ENST00000495619 DDX3YO15523 660 aaKnown RBP9.42□□□□□ -0.9
NCKAP1-208ENST00000495619 SART1O43290 800 aaKnown RBP9.42□□□□□ -0.9
NCKAP1-208ENST00000495619 ALX3O95076 343 aa9.42□□□□□ -0.9
NCKAP1-208ENST00000495619 LDHBP07195 334 aaKnown RBP9.42□□□□□ -0.9
NCKAP1-208ENST00000495619 FURINP09958 794 aa9.42□□□□□ -0.9
NCKAP1-208ENST00000495619 FCGRTP55899 365 aa9.42□□□□□ -0.9
NCKAP1-208ENST00000495619 FOXD4L4Q8WXT5 416 aaPredicted RBP9.42□□□□□ -0.9
NCKAP1-208ENST00000495619 K7ELQ4 463 aaPredicted RBP9.41□□□□□ -0.9
NCKAP1-208ENST00000495619 ADAM11O75078 769 aa9.41□□□□□ -0.9
NCKAP1-208ENST00000495619 B3GALT4O96024 378 aa9.41□□□□□ -0.9
NCKAP1-208ENST00000495619 PPP2R3AQ06190 1150 aa9.41□□□□□ -0.9
NCKAP1-208ENST00000495619 EAPPQ56P03 285 aaPredicted RBP9.41□□□□□ -0.9
NCKAP1-208ENST00000495619 ANKRD34AQ69YU3 496 aa9.41□□□□□ -0.9
NCKAP1-208ENST00000495619 FDX2Q6P4F2 183 aa9.41□□□□□ -0.9
NCKAP1-208ENST00000495619 AGGF1Q8N302 714 aaeCLIP9.41□□□□□ -0.9
NCKAP1-208ENST00000495619 UBASH3BQ8TF42 649 aa9.41□□□□□ -0.9
NCKAP1-208ENST00000495619 TM4SF5O14894 197 aa9.4□□□□□ -0.9
NCKAP1-208ENST00000495619 WISP1O95388 367 aa9.4□□□□□ -0.9
NCKAP1-208ENST00000495619 P4HBP07237 508 aaKnown RBP9.4□□□□□ -0.9
NCKAP1-208ENST00000495619 H2AFB1P0C5Y9 115 aa9.4□□□□□ -0.9
NCKAP1-208ENST00000495619 H2AFB2P0C5Z0 115 aa9.4□□□□□ -0.9
NCKAP1-208ENST00000495619 GSTT1P30711 240 aa9.4□□□□□ -0.9
NCKAP1-208ENST00000495619 ZNF423Q2M1K9 1284 aa9.4□□□□□ -0.9
NCKAP1-208ENST00000495619 NUTM2GQ5VZR2 741 aa9.4□□□□□ -0.9
NCKAP1-208ENST00000495619 KIAA1211Q6ZU35 1233 aa9.4□□□□□ -0.9
NCKAP1-208ENST00000495619 DZIP1LQ8IYY4 767 aaKnown RBP9.4□□□□□ -0.9
NCKAP1-208ENST00000495619 CORO1BQ9BR76 489 aa9.4□□□□□ -0.9
NCKAP1-208ENST00000495619 CYP4F12Q9HCS2 524 aa9.4□□□□□ -0.9
NCKAP1-208ENST00000495619 MEGF11A6BM72 1044 aa9.39□□□□□ -0.91
NCKAP1-208ENST00000495619 AP3B2Q13367 1082 aa9.39□□□□□ -0.91
NCKAP1-208ENST00000495619 UVSSAQ2YD98 709 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms