RNA–Protein interactions for RNA: ENST00000495350.5

CBX1-205, Transcript of chromobox 1, humanhuman

TSL 2 BASIC

Gene CBX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-205ENST00000495350 TNFAIP1Q13829 316 aa7.94□□□□□ -1.14
CBX1-205ENST00000495350 DUSP27Q5VZP5 1158 aa7.94□□□□□ -1.14
CBX1-205ENST00000495350 SH3TC2Q8TF17 1288 aa7.94□□□□□ -1.14
CBX1-205ENST00000495350 JARID2Q92833 1246 aaPredicted RBP7.94□□□□□ -1.14
CBX1-205ENST00000495350 ZBED3Q96IU2 234 aaPredicted RBP7.94□□□□□ -1.14
CBX1-205ENST00000495350 MPHOSPH8Q99549 860 aa7.94□□□□□ -1.14
CBX1-205ENST00000495350 PTPN18Q99952 460 aa7.94□□□□□ -1.14
CBX1-205ENST00000495350 ANKRD2Q9GZV1 360 aa7.94□□□□□ -1.14
CBX1-205ENST00000495350 CSADQ9Y600 493 aa7.94□□□□□ -1.14
CBX1-205ENST00000495350 RANBP2P49792 3224 aaKnown RBP7.93□□□□□ -1.14
CBX1-205ENST00000495350 SZT2Q5T011 3432 aa7.93□□□□□ -1.14
CBX1-205ENST00000495350 CCL15-CCL14A0A0B4J2E2 113 aa7.93□□□□□ -1.14
CBX1-205ENST00000495350 F8W031 263 aaPredicted RBP7.93□□□□□ -1.14
CBX1-205ENST00000495350 PRMT2P55345 433 aa7.93□□□□□ -1.14
CBX1-205ENST00000495350 CCL15Q16663 113 aa7.93□□□□□ -1.14
CBX1-205ENST00000495350 CFAP100Q494V2 611 aa7.93□□□□□ -1.14
CBX1-205ENST00000495350 NBPF12Q5TAG4 269 aaPredicted RBP7.93□□□□□ -1.14
CBX1-205ENST00000495350 MTMR14Q8NCE2 650 aa7.93□□□□□ -1.14
CBX1-205ENST00000495350 SSC5DA1L4H1 1573 aa7.93□□□□□ -1.14
CBX1-205ENST00000495350 A0A1W2PPC1 479 aa7.92□□□□□ -1.14
CBX1-205ENST00000495350 SPDYE2BA6NHP3 402 aa7.92□□□□□ -1.14
CBX1-205ENST00000495350 WTIPA6NIX2 430 aaPredicted RBP7.92□□□□□ -1.14
CBX1-205ENST00000495350 USP2O75604 605 aaPredicted RBP7.92□□□□□ -1.14
CBX1-205ENST00000495350 SPDYE6P0CI01 402 aa7.92□□□□□ -1.14
CBX1-205ENST00000495350 HOXD10P28358 340 aa7.92□□□□□ -1.14
CBX1-205ENST00000495350 MNX1P50219 401 aaPredicted RBP7.92□□□□□ -1.14
CBX1-205ENST00000495350 LACTBP83111 547 aaPredicted RBP7.92□□□□□ -1.14
CBX1-205ENST00000495350 CAP1Q01518 475 aa7.92□□□□□ -1.14
CBX1-205ENST00000495350 NEXNQ0ZGT2 675 aa7.92□□□□□ -1.14
CBX1-205ENST00000495350 RASA3Q14644 834 aa7.92□□□□□ -1.14
CBX1-205ENST00000495350 TXNRD3Q86VQ6 643 aa7.92□□□□□ -1.14
CBX1-205ENST00000495350 RAET1EQ8TD07 263 aa7.92□□□□□ -1.14
CBX1-205ENST00000495350 BRI3BPQ8WY22 251 aa7.92□□□□□ -1.14
CBX1-205ENST00000495350 METTL22Q9BUU2 404 aaPredicted RBP7.92□□□□□ -1.14
CBX1-205ENST00000495350 CHMP4AQ9BY43 222 aa7.92□□□□□ -1.14
CBX1-205ENST00000495350 GREM2Q9H772 168 aa7.92□□□□□ -1.14
CBX1-205ENST00000495350 BIN2Q9UBW5 565 aaPredicted RBP7.92□□□□□ -1.14
CBX1-205ENST00000495350 COL6A3P12111 3177 aa7.91□□□□□ -1.14
CBX1-205ENST00000495350 TLR2O60603 784 aa7.91□□□□□ -1.14
CBX1-205ENST00000495350 KLRK1P26718 216 aa7.91□□□□□ -1.14
CBX1-205ENST00000495350 TNNI2P48788 182 aa7.91□□□□□ -1.14
CBX1-205ENST00000495350 UBXN2AP68543 259 aa7.91□□□□□ -1.14
CBX1-205ENST00000495350 ZNF804AQ7Z570 1209 aa7.91□□□□□ -1.14
CBX1-205ENST00000495350 TTLL11Q8NHH1 800 aa7.91□□□□□ -1.14
CBX1-205ENST00000495350 MS4A4AQ96JQ5 239 aa7.91□□□□□ -1.14
CBX1-205ENST00000495350 PHAXQ9H814 394 aaKnown RBP7.91□□□□□ -1.14
CBX1-205ENST00000495350 CD209Q9NNX6 404 aa7.91□□□□□ -1.14
CBX1-205ENST00000495350 LAMB1P07942 1786 aa7.91□□□□□ -1.14
CBX1-205ENST00000495350 EVI5O60447 810 aa7.9□□□□□ -1.14
CBX1-205ENST00000495350 ECM2O94769 699 aaPredicted RBP7.9□□□□□ -1.14
CBX1-205ENST00000495350 FARP2O94887 1054 aaPredicted RBP7.9□□□□□ -1.14
CBX1-205ENST00000495350 CETPP11597 493 aa7.9□□□□□ -1.14
CBX1-205ENST00000495350 ITGA6P23229 1130 aa7.9□□□□□ -1.14
CBX1-205ENST00000495350 GRK4P32298 578 aa7.9□□□□□ -1.14
CBX1-205ENST00000495350 MAP3K9P80192 1104 aa7.9□□□□□ -1.14
CBX1-205ENST00000495350 VGLL4Q14135 290 aa7.9□□□□□ -1.14
CBX1-205ENST00000495350 MTFR1Q15390 333 aa7.9□□□□□ -1.14
CBX1-205ENST00000495350 CCDC146Q8IYE0 955 aa7.9□□□□□ -1.14
CBX1-205ENST00000495350 FAM43AQ8N2R8 423 aa7.9□□□□□ -1.14
CBX1-205ENST00000495350 HELBQ8NG08 1087 aaPredicted RBP7.9□□□□□ -1.14
CBX1-205ENST00000495350 SHISA4Q96DD7 197 aa7.9□□□□□ -1.14
CBX1-205ENST00000495350 PRMT6Q96LA8 375 aaPredicted RBP7.9□□□□□ -1.14
CBX1-205ENST00000495350 TRIM47Q96LD4 638 aa7.9□□□□□ -1.14
CBX1-205ENST00000495350 ARHGAP39Q9C0H5 1083 aa7.9□□□□□ -1.14
CBX1-205ENST00000495350 RNF208Q9H0X6 261 aa7.9□□□□□ -1.14
CBX1-205ENST00000495350 ZCCHC17Q9NP64 241 aaKnown RBP7.9□□□□□ -1.14
CBX1-205ENST00000495350 MAP3K2Q9Y2U5 619 aa7.9□□□□□ -1.14
CBX1-205ENST00000495350 SPEF2Q9C093 1822 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 ZBTB7BO15156 539 aaPredicted RBP7.89□□□□□ -1.15
CBX1-205ENST00000495350 FMNL1O95466 1100 aaPredicted RBP7.89□□□□□ -1.15
CBX1-205ENST00000495350 GJB1P08034 283 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 PSMC4P43686 418 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 GJA8P48165 433 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 FKBP1AP62942 108 aaKnown RBP7.89□□□□□ -1.15
CBX1-205ENST00000495350 CHRNDQ07001 517 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 SNAPC2Q13487 334 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 CCDC30Q5VVM6 783 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 UBE3BQ7Z3V4 1068 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 CERS5Q8N5B7 392 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 CNKSR2Q8WXI2 1034 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 MBIPQ9NS73 344 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 SRRDQ9UH36 339 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 RIPOR2Q9Y4F9 1068 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 PCDHAC2Q9Y5I4 1007 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 ZNF646O15015 1829 aaPredicted RBP7.89□□□□□ -1.15
CBX1-205ENST00000495350 ECM29Q5VYK3 1845 aa7.89□□□□□ -1.15
CBX1-205ENST00000495350 MYH3P11055 1940 aa7.88□□□□□ -1.15
CBX1-205ENST00000495350 MYPNQ86TC9 1320 aa7.88□□□□□ -1.15
CBX1-205ENST00000495350 SPDYE5A6NIY4 337 aa7.88□□□□□ -1.15
CBX1-205ENST00000495350 TCP10L2B9ZVM9 353 aa7.88□□□□□ -1.15
CBX1-205ENST00000495350 BTBD19C9JJ37 291 aa7.88□□□□□ -1.15
CBX1-205ENST00000495350 ELL2O00472 640 aaPredicted RBP7.88□□□□□ -1.15
CBX1-205ENST00000495350 CCL5P13501 91 aa7.88□□□□□ -1.15
CBX1-205ENST00000495350 CALD1Q05682 793 aaKnown RBP7.88□□□□□ -1.15
CBX1-205ENST00000495350 WDR43Q15061 677 aaKnown RBP eCLIP7.88□□□□□ -1.15
CBX1-205ENST00000495350 SPDYE2Q495Y8 402 aa7.88□□□□□ -1.15
CBX1-205ENST00000495350 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.88□□□□□ -1.15
CBX1-205ENST00000495350 ERO1BQ86YB8 467 aa7.88□□□□□ -1.15
CBX1-205ENST00000495350 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.88□□□□□ -1.15
CBX1-205ENST00000495350 RUNDC1Q96C34 613 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms