RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 PASKQ96RG2 1323 aa21.23■□□□□ 0.99
SNX17-209ENST00000494893 COL1A1P02452 1464 aaPredicted RBP21.22■□□□□ 0.99
SNX17-209ENST00000494893 ARAP2Q8WZ64 1704 aa21.22■□□□□ 0.99
SNX17-209ENST00000494893 TIMM10P62072 90 aa21.22■□□□□ 0.99
SNX17-209ENST00000494893 G3BP1Q13283 466 aaKnown RBP eCLIP21.22■□□□□ 0.99
SNX17-209ENST00000494893 RBM26Q5T8P6 1007 aaKnown RBP21.22■□□□□ 0.99
SNX17-209ENST00000494893 ASTN2O75129 1339 aaPredicted RBP21.22■□□□□ 0.99
SNX17-209ENST00000494893 MYO3BQ8WXR4 1341 aa21.22■□□□□ 0.99
SNX17-209ENST00000494893 SURF6O75683 361 aaKnown RBP21.21■□□□□ 0.99
SNX17-209ENST00000494893 FKBP1AP62942 108 aaKnown RBP21.21■□□□□ 0.99
SNX17-209ENST00000494893 FMR1Q06787 632 aaKnown RBP eCLIP21.21■□□□□ 0.99
SNX17-209ENST00000494893 KIF4BQ2VIQ3 1234 aa21.21■□□□□ 0.99
SNX17-209ENST00000494893 CAVIN4Q5BKX8 364 aa21.21■□□□□ 0.99
SNX17-209ENST00000494893 KIAA0825Q8IV33 1275 aa21.21■□□□□ 0.99
SNX17-209ENST00000494893 CNTROBQ8N137 903 aa21.21■□□□□ 0.99
SNX17-209ENST00000494893 A0A1B0GUL7 405 aa21.2■□□□□ 0.98
SNX17-209ENST00000494893 PHKA1P46020 1223 aa21.2■□□□□ 0.98
SNX17-209ENST00000494893 GRIK5Q16478 980 aa21.2■□□□□ 0.98
SNX17-209ENST00000494893 MYOZ2Q9NPC6 264 aa21.2■□□□□ 0.98
SNX17-209ENST00000494893 HTRA3P83110 453 aa21.19■□□□□ 0.98
SNX17-209ENST00000494893 VPS37DQ86XT2 251 aa21.19■□□□□ 0.98
SNX17-209ENST00000494893 RPAP2Q8IXW5 612 aaPredicted RBP21.19■□□□□ 0.98
SNX17-209ENST00000494893 ZC3H15Q8WU90 426 aaKnown RBP21.19■□□□□ 0.98
SNX17-209ENST00000494893 CHAF1AQ13111 956 aaPredicted RBP21.18■□□□□ 0.98
SNX17-209ENST00000494893 XAGE2Q96GT9 111 aa21.18■□□□□ 0.98
SNX17-209ENST00000494893 ZBED3Q96IU2 234 aaPredicted RBP21.18■□□□□ 0.98
SNX17-209ENST00000494893 EXOC6BQ9Y2D4 811 aa21.18■□□□□ 0.98
SNX17-209ENST00000494893 PCDHAC2Q9Y5I4 1007 aa21.18■□□□□ 0.98
SNX17-209ENST00000494893 TRAF5O00463 557 aa21.17■□□□□ 0.98
SNX17-209ENST00000494893 APLP1P51693 650 aa21.17■□□□□ 0.98
SNX17-209ENST00000494893 MFSD14BQ5SR56 506 aa21.17■□□□□ 0.98
SNX17-209ENST00000494893 CCDC102BQ68D86 513 aa21.17■□□□□ 0.98
SNX17-209ENST00000494893 DLK2Q6UY11 383 aa21.17■□□□□ 0.98
SNX17-209ENST00000494893 GLIS2Q9BZE0 524 aaPredicted RBP21.17■□□□□ 0.98
SNX17-209ENST00000494893 CHMP4BQ9H444 224 aaKnown RBP21.17■□□□□ 0.98
SNX17-209ENST00000494893 AKAP2Q9Y2D5 859 aa21.17■□□□□ 0.98
SNX17-209ENST00000494893 CEP350Q5VT06 3117 aa21.16■□□□□ 0.98
SNX17-209ENST00000494893 F8W031 263 aaPredicted RBP21.16■□□□□ 0.98
SNX17-209ENST00000494893 NEFLP07196 543 aa21.16■□□□□ 0.98
SNX17-209ENST00000494893 SCARF1Q14162 830 aa21.16■□□□□ 0.98
SNX17-209ENST00000494893 NBPF9Q3BBW0 867 aa21.16■□□□□ 0.98
SNX17-209ENST00000494893 GPR108Q9NPR9 543 aa21.16■□□□□ 0.98
SNX17-209ENST00000494893 AOX1Q06278 1338 aa21.15■□□□□ 0.98
SNX17-209ENST00000494893 WNT10BO00744 389 aa21.15■□□□□ 0.98
SNX17-209ENST00000494893 ZBTB22O15209 634 aa21.15■□□□□ 0.98
SNX17-209ENST00000494893 OS9Q13438 667 aaPredicted RBP21.15■□□□□ 0.98
SNX17-209ENST00000494893 TNNI3KQ59H18 835 aa21.15■□□□□ 0.98
SNX17-209ENST00000494893 CRBNQ96SW2 442 aa21.15■□□□□ 0.98
SNX17-209ENST00000494893 GGA3Q9NZ52 723 aa21.15■□□□□ 0.98
SNX17-209ENST00000494893 FPGT-TNNI3KV9GXZ4 949 aa21.15■□□□□ 0.98
SNX17-209ENST00000494893 FRAT2O75474 233 aaPredicted RBP21.14■□□□□ 0.97
SNX17-209ENST00000494893 OGFOD1Q8N543 542 aa21.14■□□□□ 0.97
SNX17-209ENST00000494893 NEUROD6Q96NK8 337 aa21.14■□□□□ 0.97
SNX17-209ENST00000494893 MMP14P50281 582 aa21.13■□□□□ 0.97
SNX17-209ENST00000494893 ANGEL2Q5VTE6 544 aaKnown RBP21.13■□□□□ 0.97
SNX17-209ENST00000494893 USP48Q86UV5 1035 aa21.13■□□□□ 0.97
SNX17-209ENST00000494893 DBNDD2Q9BQY9 259 aa21.13■□□□□ 0.97
SNX17-209ENST00000494893 HDAC9Q9UKV0 1011 aa21.13■□□□□ 0.97
SNX17-209ENST00000494893 ADM5C9JUS6 153 aa21.12■□□□□ 0.97
SNX17-209ENST00000494893 RASGRF1Q13972 1273 aa21.12■□□□□ 0.97
SNX17-209ENST00000494893 MTMR14Q8NCE2 650 aa21.12■□□□□ 0.97
SNX17-209ENST00000494893 EAF2Q96CJ1 260 aaPredicted RBP21.12■□□□□ 0.97
SNX17-209ENST00000494893 TLR7Q9NYK1 1049 aaKnown RBP21.12■□□□□ 0.97
SNX17-209ENST00000494893 PCDHB15Q9Y5E8 787 aa21.12■□□□□ 0.97
SNX17-209ENST00000494893 HMMRO75330 724 aa21.11■□□□□ 0.97
SNX17-209ENST00000494893 CFAP100Q494V2 611 aa21.11■□□□□ 0.97
SNX17-209ENST00000494893 CST9Q5W186 159 aa21.11■□□□□ 0.97
SNX17-209ENST00000494893 CDC37L1Q7L3B6 337 aa21.11■□□□□ 0.97
SNX17-209ENST00000494893 DNAJC5GQ8N7S2 189 aa21.11■□□□□ 0.97
SNX17-209ENST00000494893 TBC1D22AQ8WUA7 517 aa21.11■□□□□ 0.97
SNX17-209ENST00000494893 GNL3LQ9NVN8 582 aaKnown RBP21.11■□□□□ 0.97
SNX17-209ENST00000494893 TTF2Q9UNY4 1162 aaKnown RBP21.11■□□□□ 0.97
SNX17-209ENST00000494893 SCAF8Q9UPN6 1271 aaKnown RBP21.11■□□□□ 0.97
SNX17-209ENST00000494893 SEMA3EO15041 775 aa21.1■□□□□ 0.97
SNX17-209ENST00000494893 KRT26Q7Z3Y9 468 aa21.1■□□□□ 0.97
SNX17-209ENST00000494893 DBNLQ9UJU6 430 aaKnown RBP21.1■□□□□ 0.97
SNX17-209ENST00000494893 DENND2AQ9ULE3 1009 aa21.1■□□□□ 0.97
SNX17-209ENST00000494893 SPDYE2BA6NHP3 402 aa21.09■□□□□ 0.97
SNX17-209ENST00000494893 SPDYE6P0CI01 402 aa21.09■□□□□ 0.97
SNX17-209ENST00000494893 ARID4AP29374 1257 aaPredicted RBP21.09■□□□□ 0.97
SNX17-209ENST00000494893 DLGAP5Q15398 846 aa21.09■□□□□ 0.97
SNX17-209ENST00000494893 PI16Q6UXB8 463 aa21.09■□□□□ 0.97
SNX17-209ENST00000494893 WDR66Q8TBY9 1149 aa21.09■□□□□ 0.97
SNX17-209ENST00000494893 RHPN1Q8TCX5 695 aa21.09■□□□□ 0.97
SNX17-209ENST00000494893 DCPSQ96C86 337 aaKnown RBP21.09■□□□□ 0.97
SNX17-209ENST00000494893 PRMT6Q96LA8 375 aaPredicted RBP21.09■□□□□ 0.97
SNX17-209ENST00000494893 CCDC8Q9H0W5 538 aaPredicted RBP21.09■□□□□ 0.97
SNX17-209ENST00000494893 HMG20BQ9P0W2 317 aa21.09■□□□□ 0.97
SNX17-209ENST00000494893 GTF3C3Q9Y5Q9 886 aa21.09■□□□□ 0.97
SNX17-209ENST00000494893 PDS5AQ29RF7 1337 aaKnown RBP21.08■□□□□ 0.97
SNX17-209ENST00000494893 PITPNM2Q9BZ72 1349 aa21.08■□□□□ 0.97
SNX17-209ENST00000494893 SALL1Q9NSC2 1324 aa21.08■□□□□ 0.97
SNX17-209ENST00000494893 MYH13Q9UKX3 1938 aa21.08■□□□□ 0.97
SNX17-209ENST00000494893 PRDX5P30044 214 aa21.08■□□□□ 0.97
SNX17-209ENST00000494893 IRX6P78412 446 aaPredicted RBP21.08■□□□□ 0.97
SNX17-209ENST00000494893 IL1RAPL2Q9NP60 686 aa21.08■□□□□ 0.97
SNX17-209ENST00000494893 CREBZFQ9NS37 354 aa21.08■□□□□ 0.97
SNX17-209ENST00000494893 SERPINA10Q9UK55 444 aa21.08■□□□□ 0.97
SNX17-209ENST00000494893 TMEM88BA6NKF7 163 aa21.07■□□□□ 0.96
SNX17-209ENST00000494893 APBB1O00213 710 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms