RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 WTIPA6NIX2 430 aaPredicted RBP12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 E7EWF7 191 aa12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 BCAMP50895 628 aa12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 EXOSC10Q01780 885 aaKnown RBP12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 SLC9C2Q5TAH2 1124 aa12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 MCTP1Q6DN14 999 aa12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 ZSCAN25Q6NSZ9 544 aa12.65□□□□□ -0.38
PRPF4B-209ENST00000494674 TIAM2Q8IVF5 1701 aa12.64□□□□□ -0.39
PRPF4B-209ENST00000494674 DTNBO60941 627 aa12.64□□□□□ -0.39
PRPF4B-209ENST00000494674 SYT1P21579 422 aa12.64□□□□□ -0.39
PRPF4B-209ENST00000494674 TM4SF1P30408 202 aa12.64□□□□□ -0.39
PRPF4B-209ENST00000494674 FOXD4L5Q5VV16 416 aaPredicted RBP12.64□□□□□ -0.39
PRPF4B-209ENST00000494674 KRT27Q7Z3Y8 459 aa12.64□□□□□ -0.39
PRPF4B-209ENST00000494674 FOXD4L4Q8WXT5 416 aaPredicted RBP12.64□□□□□ -0.39
PRPF4B-209ENST00000494674 AGXT2Q9BYV1 514 aa12.64□□□□□ -0.39
PRPF4B-209ENST00000494674 MINPP1Q9UNW1 487 aa12.64□□□□□ -0.39
PRPF4B-209ENST00000494674 SMC3Q9UQE7 1217 aa12.64□□□□□ -0.39
PRPF4B-209ENST00000494674 WDR33Q9C0J8 1336 aaKnown RBP12.64□□□□□ -0.39
PRPF4B-209ENST00000494674 ZNF532Q9HCE3 1301 aa12.64□□□□□ -0.39
PRPF4B-209ENST00000494674 CARMIL3Q8ND23 1372 aa12.64□□□□□ -0.39
PRPF4B-209ENST00000494674 GOLGA6L22H0YM25 854 aa12.63□□□□□ -0.39
PRPF4B-209ENST00000494674 IDH1O75874 414 aaKnown RBP12.63□□□□□ -0.39
PRPF4B-209ENST00000494674 PHF14O94880 888 aa12.63□□□□□ -0.39
PRPF4B-209ENST00000494674 FGAP02671 866 aa12.63□□□□□ -0.39
PRPF4B-209ENST00000494674 HMGB1P09429 215 aaKnown RBP12.63□□□□□ -0.39
PRPF4B-209ENST00000494674 GJB2P29033 226 aa12.63□□□□□ -0.39
PRPF4B-209ENST00000494674 NFIXQ14938 502 aa12.63□□□□□ -0.39
PRPF4B-209ENST00000494674 SKOR2Q2VWA4 1001 aaPredicted RBP12.63□□□□□ -0.39
PRPF4B-209ENST00000494674 TRAPPC3LQ5T215 181 aa12.63□□□□□ -0.39
PRPF4B-209ENST00000494674 Q6ZUG5 572 aa12.63□□□□□ -0.39
PRPF4B-209ENST00000494674 DHX32Q7L7V1 743 aaKnown RBP12.63□□□□□ -0.39
PRPF4B-209ENST00000494674 CCDC24Q8N4L8 307 aa12.63□□□□□ -0.39
PRPF4B-209ENST00000494674 NBPF3Q9H094 633 aa12.63□□□□□ -0.39
PRPF4B-209ENST00000494674 MAST2Q6P0Q8 1798 aa12.63□□□□□ -0.39
PRPF4B-209ENST00000494674 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 GTF2E1P29083 439 aaPredicted RBP12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 RFC4P35249 363 aa12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 UBE4AQ14139 1066 aa12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 KLHL40Q2TBA0 621 aa12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 TPTE2Q6XPS3 522 aa12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 NLRP3Q96P20 1036 aa12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 GZF1Q9H116 711 aaPredicted RBP12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 KIAA1551Q9HCM1 1747 aa12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 FSD2A1L4K1 749 aa12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 STX6O43752 255 aa12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 ZSCAN22P10073 491 aaPredicted RBP12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 SLC27A3Q5K4L6 730 aa12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 GTF3C6Q969F1 213 aa12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 LRRC2Q9BYS8 371 aa12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 CTNNA3Q9UI47 895 aa12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 MTMR6Q9Y217 621 aa12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 MYH15Q9Y2K3 1946 aa12.62□□□□□ -0.39
PRPF4B-209ENST00000494674 ANKRD31Q8N7Z5 1873 aa12.61□□□□□ -0.39
PRPF4B-209ENST00000494674 IRS2Q9Y4H2 1338 aa12.61□□□□□ -0.39
PRPF4B-209ENST00000494674 TRIM37O94972 964 aa12.61□□□□□ -0.39
PRPF4B-209ENST00000494674 GYG1P46976 350 aa12.61□□□□□ -0.39
PRPF4B-209ENST00000494674 RPS8P62241 208 aaKnown RBP12.61□□□□□ -0.39
PRPF4B-209ENST00000494674 FBXL16Q8N461 479 aa12.61□□□□□ -0.39
PRPF4B-209ENST00000494674 BRF1Q92994 677 aa12.61□□□□□ -0.39
PRPF4B-209ENST00000494674 STRBPQ96SI9 672 aaKnown RBP12.61□□□□□ -0.39
PRPF4B-209ENST00000494674 TNS1Q9HBL0 1735 aaKnown RBP12.61□□□□□ -0.39
PRPF4B-209ENST00000494674 ZMYM6O95789 1325 aa12.6□□□□□ -0.39
PRPF4B-209ENST00000494674 GYS1P13807 737 aa12.6□□□□□ -0.39
PRPF4B-209ENST00000494674 HAND2P61296 217 aa12.6□□□□□ -0.39
PRPF4B-209ENST00000494674 MB21D2Q8IYB1 491 aaPredicted RBP12.6□□□□□ -0.39
PRPF4B-209ENST00000494674 PROM2Q8N271 834 aa12.6□□□□□ -0.39
PRPF4B-209ENST00000494674 MAGEB6Q8N7X4 407 aa12.6□□□□□ -0.39
PRPF4B-209ENST00000494674 CCDC88AQ3V6T2 1871 aa12.6□□□□□ -0.39
PRPF4B-209ENST00000494674 NRXN2Q9P2S2 1712 aa12.6□□□□□ -0.39
PRPF4B-209ENST00000494674 PRPF40AO75400 957 aaKnown RBP12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 F13A1P00488 732 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 KLRK1P26718 216 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 MAP3K12Q12852 859 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 IMMTQ16891 758 aaKnown RBP12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 GPT2Q8TD30 523 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 FAM84BQ96KN1 310 aaPredicted RBP12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 EPB41L4AQ9HCS5 686 aaPredicted RBP12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 LRRC37AA6NMS7 1700 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 PFKFB2O60825 505 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 EVCP57679 992 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 ANTXR2P58335 489 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 STK3Q13188 491 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 ALX1Q15699 326 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 PRR5LQ6MZQ0 368 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 FBXO33Q7Z6M2 555 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 SLC51AQ86UW1 340 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 TBC1D10CQ8IV04 446 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 NKX2-3Q8TAU0 364 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 IQSEC3Q9UPP2 1182 aaPredicted RBP12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 DDX49Q9Y6V7 483 aaKnown RBP12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 LTBP1Q14766 1721 aa12.59□□□□□ -0.39
PRPF4B-209ENST00000494674 RGPD3A6NKT7 1758 aaPredicted RBP12.58□□□□□ -0.4
PRPF4B-209ENST00000494674 RGPD4Q7Z3J3 1758 aa12.58□□□□□ -0.4
PRPF4B-209ENST00000494674 PNPLA7Q6ZV29 1317 aa12.58□□□□□ -0.4
PRPF4B-209ENST00000494674 BAZ2AQ9UIF9 1905 aaKnown RBP12.58□□□□□ -0.4
PRPF4B-209ENST00000494674 JAK2O60674 1132 aa12.58□□□□□ -0.4
PRPF4B-209ENST00000494674 MBD4O95243 580 aa12.58□□□□□ -0.4
PRPF4B-209ENST00000494674 APOBRQ0VD83 1088 aa12.58□□□□□ -0.4
PRPF4B-209ENST00000494674 SCRN1Q12765 414 aa12.58□□□□□ -0.4
PRPF4B-209ENST00000494674 CNBD1Q8NA66 436 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms