RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 ZMYND15Q9H091 742 aa13.16□□□□□ -0.3
ZIC4-216ENST00000494569 M0R2C6 588 aa13.15□□□□□ -0.3
ZIC4-216ENST00000494569 ZBTB22O15209 634 aa13.15□□□□□ -0.3
ZIC4-216ENST00000494569 HSP90AA1P07900 732 aaKnown RBP13.15□□□□□ -0.3
ZIC4-216ENST00000494569 HCLS1P14317 486 aaPredicted RBP13.15□□□□□ -0.3
ZIC4-216ENST00000494569 CCDC158Q5M9N0 1113 aa13.15□□□□□ -0.3
ZIC4-216ENST00000494569 AGXT2Q9BYV1 514 aa13.15□□□□□ -0.3
ZIC4-216ENST00000494569 NARFQ9UHQ1 456 aa13.15□□□□□ -0.3
ZIC4-216ENST00000494569 PTMSP20962 102 aa13.15□□□□□ -0.3
ZIC4-216ENST00000494569 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
ZIC4-216ENST00000494569 METTL24Q5JXM2 366 aa13.15□□□□□ -0.3
ZIC4-216ENST00000494569 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
ZIC4-216ENST00000494569 PDRG1Q9NUG6 133 aa13.15□□□□□ -0.3
ZIC4-216ENST00000494569 NIP7Q9Y221 180 aaKnown RBP eCLIP13.15□□□□□ -0.3
ZIC4-216ENST00000494569 CYP46A1Q9Y6A2 500 aa13.15□□□□□ -0.3
ZIC4-216ENST00000494569 CYP21A2P08686 494 aa13.15□□□□□ -0.31
ZIC4-216ENST00000494569 GAS2L3Q86XJ1 694 aa13.15□□□□□ -0.31
ZIC4-216ENST00000494569 GPT2Q8TD30 523 aa13.15□□□□□ -0.31
ZIC4-216ENST00000494569 LPIN2Q92539 896 aa13.15□□□□□ -0.31
ZIC4-216ENST00000494569 OSBP2Q969R2 916 aa13.15□□□□□ -0.31
ZIC4-216ENST00000494569 ZNF652Q9Y2D9 606 aa13.15□□□□□ -0.31
ZIC4-216ENST00000494569 FOCADQ5VW36 1801 aa13.14□□□□□ -0.31
ZIC4-216ENST00000494569 ZAP70P43403 619 aa13.14□□□□□ -0.31
ZIC4-216ENST00000494569 PUM3Q15397 648 aaKnown RBP13.14□□□□□ -0.31
ZIC4-216ENST00000494569 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
ZIC4-216ENST00000494569 TTC39AQ5SRH9 613 aa13.14□□□□□ -0.31
ZIC4-216ENST00000494569 L1TD1Q5T7N2 865 aaKnown RBP13.14□□□□□ -0.31
ZIC4-216ENST00000494569 STOX1Q6ZVD7 989 aa13.14□□□□□ -0.31
ZIC4-216ENST00000494569 ZSCAN31Q96LW9 406 aaPredicted RBP13.14□□□□□ -0.31
ZIC4-216ENST00000494569 SEC31BQ9NQW1 1179 aa13.14□□□□□ -0.31
ZIC4-216ENST00000494569 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
ZIC4-216ENST00000494569 ZKSCAN1P17029 563 aaPredicted RBP13.14□□□□□ -0.31
ZIC4-216ENST00000494569 PSMA5P28066 241 aa13.14□□□□□ -0.31
ZIC4-216ENST00000494569 RNF20Q5VTR2 975 aa13.14□□□□□ -0.31
ZIC4-216ENST00000494569 C3orf67Q6ZVT6 689 aa13.14□□□□□ -0.31
ZIC4-216ENST00000494569 TCRBV5S4A2TA0A5A2 114 aa13.13□□□□□ -0.31
ZIC4-216ENST00000494569 GOLGA6L3A6NEY3 463 aa13.13□□□□□ -0.31
ZIC4-216ENST00000494569 SH2B1Q9NRF2 756 aaPredicted RBP13.13□□□□□ -0.31
ZIC4-216ENST00000494569 TPCN1Q9ULQ1 816 aa13.13□□□□□ -0.31
ZIC4-216ENST00000494569 HSPD1P10809 573 aaKnown RBP13.13□□□□□ -0.31
ZIC4-216ENST00000494569 CCDC152Q4G0S7 254 aa13.13□□□□□ -0.31
ZIC4-216ENST00000494569 TBC1D9BQ66K14 1250 aa13.13□□□□□ -0.31
ZIC4-216ENST00000494569 KRT32Q14532 448 aa13.13□□□□□ -0.31
ZIC4-216ENST00000494569 ME3Q16798 604 aa13.13□□□□□ -0.31
ZIC4-216ENST00000494569 CNNM1Q9NRU3 951 aa13.13□□□□□ -0.31
ZIC4-216ENST00000494569 ERFEQ4G0M1 354 aa13.12□□□□□ -0.31
ZIC4-216ENST00000494569 CCDC102BQ68D86 513 aa13.12□□□□□ -0.31
ZIC4-216ENST00000494569 BCCIPQ9P287 314 aaKnown RBP eCLIP13.12□□□□□ -0.31
ZIC4-216ENST00000494569 KCNQ4P56696 695 aa13.12□□□□□ -0.31
ZIC4-216ENST00000494569 ZNF445P59923 1031 aa13.12□□□□□ -0.31
ZIC4-216ENST00000494569 EXOSC10Q01780 885 aaKnown RBP13.12□□□□□ -0.31
ZIC4-216ENST00000494569 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
ZIC4-216ENST00000494569 ISY1Q9ULR0 285 aaKnown RBP13.12□□□□□ -0.31
ZIC4-216ENST00000494569 ZNF804BA4D1E1 1349 aa13.12□□□□□ -0.31
ZIC4-216ENST00000494569 ADD2P35612 726 aa13.11□□□□□ -0.31
ZIC4-216ENST00000494569 PIH1D3Q9NQM4 214 aaKnown RBP13.11□□□□□ -0.31
ZIC4-216ENST00000494569 PHKA1P46020 1223 aa13.11□□□□□ -0.31
ZIC4-216ENST00000494569 APPBP2Q92624 585 aa13.11□□□□□ -0.31
ZIC4-216ENST00000494569 COL1A1P02452 1464 aaPredicted RBP13.11□□□□□ -0.31
ZIC4-216ENST00000494569 UQCRFS1P1P0C7P4 283 aa13.11□□□□□ -0.31
ZIC4-216ENST00000494569 SKOR2Q2VWA4 1001 aaPredicted RBP13.11□□□□□ -0.31
ZIC4-216ENST00000494569 IRS2Q9Y4H2 1338 aa13.11□□□□□ -0.31
ZIC4-216ENST00000494569 A0A0G2JLW4 131 aa13.1□□□□□ -0.31
ZIC4-216ENST00000494569 NSFL1CQ9UNZ2 370 aaKnown RBP13.1□□□□□ -0.31
ZIC4-216ENST00000494569 SALL1Q9NSC2 1324 aa13.1□□□□□ -0.31
ZIC4-216ENST00000494569 ANKRD1Q15327 319 aa13.1□□□□□ -0.31
ZIC4-216ENST00000494569 BLOC1S2Q6QNY1 142 aa13.1□□□□□ -0.31
ZIC4-216ENST00000494569 PUS7LQ9H0K6 701 aaKnown RBP13.1□□□□□ -0.31
ZIC4-216ENST00000494569 ZMYM6O95789 1325 aa13.1□□□□□ -0.31
ZIC4-216ENST00000494569 UBE3CQ15386 1083 aa13.1□□□□□ -0.31
ZIC4-216ENST00000494569 NLGN2Q8NFZ4 835 aa13.1□□□□□ -0.31
ZIC4-216ENST00000494569 NEK1Q96PY6 1258 aa13.1□□□□□ -0.31
ZIC4-216ENST00000494569 TM4SF1P30408 202 aa13.09□□□□□ -0.31
ZIC4-216ENST00000494569 EVCP57679 992 aa13.09□□□□□ -0.31
ZIC4-216ENST00000494569 TTF1Q15361 905 aaPredicted RBP13.09□□□□□ -0.31
ZIC4-216ENST00000494569 LRRFIP1Q32MZ4 808 aaKnown RBP13.09□□□□□ -0.31
ZIC4-216ENST00000494569 SMIM5Q71RC9 77 aa13.09□□□□□ -0.31
ZIC4-216ENST00000494569 CHAMP1Q96JM3 812 aa13.09□□□□□ -0.31
ZIC4-216ENST00000494569 CCNL1Q9UK58 526 aaPredicted RBP13.09□□□□□ -0.31
ZIC4-216ENST00000494569 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.09□□□□□ -0.31
ZIC4-216ENST00000494569 FKBP4Q02790 459 aaKnown RBP eCLIP13.09□□□□□ -0.31
ZIC4-216ENST00000494569 ARHGEF1Q92888 912 aaKnown RBP13.09□□□□□ -0.31
ZIC4-216ENST00000494569 BSDC1Q9NW68 430 aaPredicted RBP13.09□□□□□ -0.31
ZIC4-216ENST00000494569 TFCP2L1Q9NZI6 479 aa13.09□□□□□ -0.31
ZIC4-216ENST00000494569 NOL8Q76FK4 1167 aaKnown RBP13.08□□□□□ -0.31
ZIC4-216ENST00000494569 SRP68Q9UHB9 627 aaKnown RBP13.08□□□□□ -0.31
ZIC4-216ENST00000494569 CD2APQ9Y5K6 639 aa13.08□□□□□ -0.31
ZIC4-216ENST00000494569 YBX3P16989 372 aaKnown RBP eCLIP13.08□□□□□ -0.32
ZIC4-216ENST00000494569 CHRNDQ07001 517 aa13.08□□□□□ -0.32
ZIC4-216ENST00000494569 LARP6Q9BRS8 491 aaKnown RBP13.08□□□□□ -0.32
ZIC4-216ENST00000494569 CCDC88AQ3V6T2 1871 aa13.08□□□□□ -0.32
ZIC4-216ENST00000494569 SLC5A1P13866 664 aa13.08□□□□□ -0.32
ZIC4-216ENST00000494569 RASGRF1Q13972 1273 aa13.08□□□□□ -0.32
ZIC4-216ENST00000494569 NBPF3Q9H094 633 aa13.08□□□□□ -0.32
ZIC4-216ENST00000494569 ANKRD31Q8N7Z5 1873 aa13.07□□□□□ -0.32
ZIC4-216ENST00000494569 E7EWF7 191 aa13.07□□□□□ -0.32
ZIC4-216ENST00000494569 WDR33Q9C0J8 1336 aaKnown RBP13.07□□□□□ -0.32
ZIC4-216ENST00000494569 HMGB1P09429 215 aaKnown RBP13.07□□□□□ -0.32
ZIC4-216ENST00000494569 SYT1P21579 422 aa13.07□□□□□ -0.32
ZIC4-216ENST00000494569 KCNJ4P48050 445 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms