RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 KIF13BQ9NQT8 1826 aa10.07□□□□□ -0.8
RAF1-212ENST00000494557 A1BGP04217 495 aa10.07□□□□□ -0.8
RAF1-212ENST00000494557 ANTXR2P58335 489 aa10.07□□□□□ -0.8
RAF1-212ENST00000494557 CCDC83Q8IWF9 413 aa10.07□□□□□ -0.8
RAF1-212ENST00000494557 CHAMP1Q96JM3 812 aa10.07□□□□□ -0.8
RAF1-212ENST00000494557 CNTNAP4Q9C0A0 1308 aa10.07□□□□□ -0.8
RAF1-212ENST00000494557 KDM4AO75164 1064 aa10.07□□□□□ -0.8
RAF1-212ENST00000494557 CPA1P15085 419 aa10.07□□□□□ -0.8
RAF1-212ENST00000494557 PDIA3P30101 505 aaKnown RBP10.07□□□□□ -0.8
RAF1-212ENST00000494557 OSBP2Q969R2 916 aa10.07□□□□□ -0.8
RAF1-212ENST00000494557 TPM2P07951 284 aa10.06□□□□□ -0.8
RAF1-212ENST00000494557 KRT85P78386 507 aa10.06□□□□□ -0.8
RAF1-212ENST00000494557 OS9Q13438 667 aaPredicted RBP10.06□□□□□ -0.8
RAF1-212ENST00000494557 POLR3EQ9NVU0 708 aa10.06□□□□□ -0.8
RAF1-212ENST00000494557 RTEL1Q9NZ71 1219 aa10.06□□□□□ -0.8
RAF1-212ENST00000494557 MRVI1Q9Y6F6 885 aa10.06□□□□□ -0.8
RAF1-212ENST00000494557 AP5Z1O43299 807 aa10.06□□□□□ -0.8
RAF1-212ENST00000494557 DNM1Q05193 864 aaKnown RBP10.06□□□□□ -0.8
RAF1-212ENST00000494557 TMOD3Q9NYL9 352 aa10.06□□□□□ -0.8
RAF1-212ENST00000494557 TPM3P06753 285 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 AIMP1Q12904 312 aaKnown RBP10.05□□□□□ -0.8
RAF1-212ENST00000494557 TTF1Q15361 905 aaPredicted RBP10.05□□□□□ -0.8
RAF1-212ENST00000494557 XAGE2Q96GT9 111 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 MYH8P13535 1937 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 TNS1Q9HBL0 1735 aaKnown RBP10.05□□□□□ -0.8
RAF1-212ENST00000494557 PDE8AO60658 829 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 CAMTA2O94983 1202 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 SLC10A5Q5PT55 438 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 Q6ZUG5 572 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 TOM1L2Q6ZVM7 507 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 PIBF1Q8WXW3 757 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 ROBO3Q96MS0 1386 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 NTSR2O95665 410 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 STARD3NLO95772 234 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 MCAMP43121 646 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 KCNJ6P48051 423 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 NTRK3Q16288 839 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 EDC3Q96F86 508 aaKnown RBP10.05□□□□□ -0.8
RAF1-212ENST00000494557 CTNNA3Q9UI47 895 aa10.05□□□□□ -0.8
RAF1-212ENST00000494557 COL11A2P13942 1736 aaPredicted RBP10.04□□□□□ -0.8
RAF1-212ENST00000494557 PDE8BO95263 885 aa10.04□□□□□ -0.8
RAF1-212ENST00000494557 IQCB1Q15051 598 aa10.04□□□□□ -0.8
RAF1-212ENST00000494557 CLEC4GQ6UXB4 293 aa10.04□□□□□ -0.8
RAF1-212ENST00000494557 CTAGE5O15320 804 aa10.04□□□□□ -0.8
RAF1-212ENST00000494557 LIFRP42702 1097 aa10.04□□□□□ -0.8
RAF1-212ENST00000494557 SEC62Q99442 399 aaKnown RBP10.04□□□□□ -0.8
RAF1-212ENST00000494557 PUS3Q9BZE2 481 aaKnown RBP10.04□□□□□ -0.8
RAF1-212ENST00000494557 HPSEQ9Y251 543 aa10.04□□□□□ -0.8
RAF1-212ENST00000494557 ATP5J2-PTCD1G3V325 749 aa10.03□□□□□ -0.8
RAF1-212ENST00000494557 PTCD1O75127 700 aaKnown RBP10.03□□□□□ -0.8
RAF1-212ENST00000494557 YEATS4O95619 227 aa10.03□□□□□ -0.8
RAF1-212ENST00000494557 TMEM132AQ24JP5 1023 aa10.03□□□□□ -0.8
RAF1-212ENST00000494557 FAM200AQ8TCP9 573 aa10.03□□□□□ -0.8
RAF1-212ENST00000494557 TIGD1Q96MW7 591 aa10.03□□□□□ -0.8
RAF1-212ENST00000494557 ASAP1Q9ULH1 1129 aa10.03□□□□□ -0.8
RAF1-212ENST00000494557 RRP9O43818 475 aaKnown RBP10.03□□□□□ -0.8
RAF1-212ENST00000494557 U2AF2P26368 475 aaKnown RBP eCLIP10.03□□□□□ -0.8
RAF1-212ENST00000494557 SCARF1Q14162 830 aa10.03□□□□□ -0.8
RAF1-212ENST00000494557 PARP10Q53GL7 1025 aa10.03□□□□□ -0.8
RAF1-212ENST00000494557 LARP1BQ659C4 914 aaKnown RBP10.03□□□□□ -0.8
RAF1-212ENST00000494557 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.03□□□□□ -0.8
RAF1-212ENST00000494557 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.03□□□□□ -0.8
RAF1-212ENST00000494557 RBBP6Q7Z6E9 1792 aaKnown RBP10.03□□□□□ -0.8
RAF1-212ENST00000494557 UQCRFS1P1P0C7P4 283 aa10.03□□□□□ -0.8
RAF1-212ENST00000494557 ZSCAN25Q6NSZ9 544 aa10.03□□□□□ -0.8
RAF1-212ENST00000494557 BRAPQ7Z569 592 aa10.03□□□□□ -0.8
RAF1-212ENST00000494557 DNAJC10Q8IXB1 793 aa10.03□□□□□ -0.8
RAF1-212ENST00000494557 SIL1Q9H173 461 aa10.03□□□□□ -0.8
RAF1-212ENST00000494557 CHGBP05060 677 aa10.02□□□□□ -0.81
RAF1-212ENST00000494557 HLFQ16534 295 aa10.02□□□□□ -0.81
RAF1-212ENST00000494557 FMR1NBQ8N0W7 255 aaPredicted RBP10.02□□□□□ -0.81
RAF1-212ENST00000494557 CFAP45Q9UL16 551 aa10.02□□□□□ -0.81
RAF1-212ENST00000494557 SH2B2O14492 632 aaPredicted RBP10.02□□□□□ -0.81
RAF1-212ENST00000494557 IFIT1P09914 478 aaKnown RBP10.02□□□□□ -0.81
RAF1-212ENST00000494557 CSB-PGBD3P0DP91 1061 aa10.02□□□□□ -0.81
RAF1-212ENST00000494557 SF3B3Q15393 1217 aaKnown RBP10.02□□□□□ -0.81
RAF1-212ENST00000494557 KIF6Q6ZMV9 814 aa10.02□□□□□ -0.81
RAF1-212ENST00000494557 IGDCC4Q8TDY8 1250 aa10.02□□□□□ -0.81
RAF1-212ENST00000494557 LPIN2Q92539 896 aa10.02□□□□□ -0.81
RAF1-212ENST00000494557 MYO1BO43795 1136 aa10.01□□□□□ -0.81
RAF1-212ENST00000494557 PCP11498 1178 aaKnown RBP10.01□□□□□ -0.81
RAF1-212ENST00000494557 PUM3Q15397 648 aaKnown RBP10.01□□□□□ -0.81
RAF1-212ENST00000494557 RC3H1Q5TC82 1133 aaKnown RBP10.01□□□□□ -0.81
RAF1-212ENST00000494557 FAM177A1Q8N128 213 aaPredicted RBP10.01□□□□□ -0.81
RAF1-212ENST00000494557 STAG1Q8WVM7 1258 aa10.01□□□□□ -0.81
RAF1-212ENST00000494557 FAM217BQ9NTX9 383 aaPredicted RBP10.01□□□□□ -0.81
RAF1-212ENST00000494557 ADORA1P30542 326 aa10.01□□□□□ -0.81
RAF1-212ENST00000494557 NT5DC1Q5TFE4 455 aa10.01□□□□□ -0.81
RAF1-212ENST00000494557 CCDC129Q6ZRS4 1044 aa10.01□□□□□ -0.81
RAF1-212ENST00000494557 C15orf52Q6ZUT6 534 aaKnown RBP10.01□□□□□ -0.81
RAF1-212ENST00000494557 TMEM87BQ96K49 555 aa10.01□□□□□ -0.81
RAF1-212ENST00000494557 MAP3K14Q99558 947 aa10.01□□□□□ -0.81
RAF1-212ENST00000494557 KCNF1Q9H3M0 494 aa10.01□□□□□ -0.81
RAF1-212ENST00000494557 FGAP02671 866 aa10.01□□□□□ -0.81
RAF1-212ENST00000494557 HCLS1P14317 486 aaPredicted RBP10.01□□□□□ -0.81
RAF1-212ENST00000494557 LIG1P18858 919 aa10.01□□□□□ -0.81
RAF1-212ENST00000494557 SYCP1Q15431 976 aa10.01□□□□□ -0.81
RAF1-212ENST00000494557 ADALQ6DHV7 355 aa10.01□□□□□ -0.81
RAF1-212ENST00000494557 GIMAP6Q6P9H5 292 aa10.01□□□□□ -0.81
RAF1-212ENST00000494557 DDX46Q7L014 1031 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms